; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006944 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006944
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTRAF-like family protein
Genome locationscaffold10:39545061..39547809
RNA-Seq ExpressionSpg006944
SyntenySpg006944
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146377.1 uncharacterized protein LOC111015606 [Momordica charantia]2.6e-4463.89Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        +FTFLVYD+L+DKYL VQDGK+RRFHA K EWGFEKL+SLD F++ SNGFLVDDCCAFGVD+IVMKCDG GE   +            W   L+P+G  K
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT
        ATT FLSL+L LDS K+L +G QVY+E EM+VLSQ GVGH  +T
Subjt:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]1.2e-4462.99Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        +FTFLVYD LKDKYL VQDG VRRFHAIK EWGFEKL+SLDTFND+SNGFLVDDCCAFGVDV+VMK +G                 YRWK+ L+P+G S 
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF
        A TGFLSL+L LDS KE+ QG +VYVE E+A+LSQLG      TY      +WF
Subjt:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]7.2e-4258.97Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        + TFLVYD+L+D YL V DGKVRRFHA+K EWGF KL+SL+TFND+SNGFLVDDCCAFGVD+ VMK                 +E+YRWKI LHP+G S+
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
         + GFLSL+L  DSFKE L QG +VY E E+AVLS+ GVGH+     KL++  WF+
Subjt:  ATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]2.7e-4959.78Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKC-DGNGENL-----------------------NL
        M  FLVYD+LKD+Y T+QDGKVR FHAIKKEWGFEKL+SLDTFND SNG LVDDCCAFGVDVIVMK  DGN E L                       N+
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKC-DGNGENL-----------------------NL

Query:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
        Y+SDPFTV+NY WKIEL+PRG S A TG++S+FL  DSF++L QG +VYVE ++AVLSQLG  + N          WFD
Subjt:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

XP_038875772.1 uncharacterized protein LOC120068142 [Benincasa hispida]2.0e-4458.1Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGN-GE---------------NLN--------L
        +FTFLVYD L+ KYLTVQDGK+RRF A+K EWG EKLL LDTFNDASNGFLVDDCC FGVD+ VM CDG  GE                LN        L
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGN-GE---------------NLN--------L

Query:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
         +S+PFTVE+YRWKI L+P G SKA +GFLS++L  DS  +L QG QVYVE EMA+LSQL       TY   + +F FD
Subjt:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

TrEMBL top hitse value%identityAlignment
A0A0A0KND8 Uncharacterized protein3.0e-3856.25Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCD-GNGE-----------------------NLNL
        +FTFLVYD L+ KYLTVQDGK+RRF A K EWG EKLL L+TF DASNGFLVDDCC FGVD+ VM  D G GE                       + +L
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCD-GNGE-----------------------NLNL

Query:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL
         + +PFTVEN  WKI L P G  +A  GF S++L L + KE  QG QVYVE EMAVLSQL
Subjt:  YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like5.7e-4562.99Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        +FTFLVYD LKDKYL VQDG VRRFHAIK EWGFEKL+SLDTFND+SNGFLVDDCCAFGVDV+VMK +G                 YRWK+ L+P+G S 
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF
        A TGFLSL+L LDS KE+ QG +VYVE E+A+LSQLG      TY      +WF
Subjt:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF

A0A6J1CYF6 uncharacterized protein LOC1110156113.5e-4258.97Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        + TFLVYD+L+D YL V DGKVRRFHA+K EWGF KL+SL+TFND+SNGFLVDDCCAFGVD+ VMK                 +E+YRWKI LHP+G S+
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
         + GFLSL+L  DSFKE L QG +VY E E+AVLS+ GVGH+     KL++  WF+
Subjt:  ATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

A0A6J1CZF3 uncharacterized protein LOC1110156061.3e-4463.89Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK
        +FTFLVYD+L+DKYL VQDGK+RRFHA K EWGFEKL+SLD F++ SNGFLVDDCCAFGVD+IVMKCDG GE   +            W   L+P+G  K
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSK

Query:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT
        ATT FLSL+L LDS K+L +G QVY+E EM+VLSQ GVGH  +T
Subjt:  ATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT

A0A6J1CZF7 uncharacterized protein LOC1110156105.0e-4159.31Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNL----------YDSDPFTVENYRWK
        +FT LVYD+L+D YL V DGKVRRFHA+KKEWGFEKL+SL+TFND+SNGFLVDDCCAFGVD+ VMKCDG GE L+L          + ++ F+  +   K
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNL----------YDSDPFTVENYRWK

Query:  IELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQ
        + L+P+G  KA+  +LSLFL  +S KEL QG +VY E E+AVLS+
Subjt:  IELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQ

SwissProt top hitse value%identityAlignment
Q9C870 MATH domain and coiled-coil domain-containing protein At1g313906.2e-0430.51Show/hide
Query:  DSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL
        DSD F V + +W +  +P+G+ ++T   LSL+L +  F+ L  G++ +++  + V++Q+
Subjt:  DSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL

Q9M2H5 MATH domain and coiled-coil domain-containing protein At3g584101.2e-0432.47Show/hide
Query:  SDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
        S PF + + +W++ ++P+G++     +LSLFLE+  FK L  G++ YV+  + ++ QL    R        T  WFD
Subjt:  SDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

Arabidopsis top hitse value%identityAlignment
AT1G69660.1 TRAF-like family protein2.0e-1832.3Show/hide
Query:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDC-CAFGVDVIVM------------------KCDGNGENLNLYDSDPFTV
        F VY+  ++KY T+QD +V+RF+A++  WG  K+LS DTF +  NGF+ +   C FGVDV+V                   K   N +N +    D +T 
Subjt:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDC-CAFGVDVIVM------------------KCDGNGENLNLYDSDPFTV

Query:  ENY-----RWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH
          Y      W ++L+P+G+S+A   +LSL++ L   + L    + + +  + VL+ LG  H
Subjt:  ENY-----RWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH

AT2G15710.1 TRAF-like family protein8.2e-2031.14Show/hide
Query:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIV------------------MKCDGNGENLNL-----YDS
        F VY+  ++KY T+QD +V+RF+A++  WG  ++LSL+TFND  NG+  + + C FGVDV+V                  +K   + ++ ++     Y S
Subjt:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIV------------------MKCDGNGENLNL-----YDS

Query:  DPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYG
        + F++    W ++++P+G  +    +LS+FL L   + L+   ++YV   + VL  LG   R+R  G
Subjt:  DPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYG

AT3G17380.1 TRAF-like family protein1.1e-2434.3Show/hide
Query:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMK--CDGNGENLNL----------------------
        +F   + D  KD YL +Q G  RRFH++K+EWGF+K +   TF+DASNG+L++D C FG DV V K    G GE L++                      
Subjt:  MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMK--CDGNGENLNL----------------------

Query:  -YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFFQLSS
         YDS+ F   + +WKIE +P G  + T   LS++L L   + +S G +++VE  + +  QL   H     GK+  +F     ++      S   F Q +S
Subjt:  -YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFFQLSS

Query:  NRLLKVV
          LLK V
Subjt:  NRLLKVV

AT3G20360.1 TRAF-like family protein2.3e-1432.08Show/hide
Query:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGENLNL----------------------YDSD
        F V++  + KY T+QD  V RF AIK+ WGF K+L L TFN+  NG+L D D C FGVDVI+       E  ++                      Y S+
Subjt:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGENLNL----------------------YDSD

Query:  PFTVENYRWKIELHPRGHSKATTGFLSLFLEL--DSFKELSQGFQVYVECEMAVLSQLG
         F +    W + +   G        LSL+L L      +     +VYV  ++ V +Q G
Subjt:  PFTVENYRWKIELHPRGHSKATTGFLSLFLEL--DSFKELSQGFQVYVECEMAVLSQLG

AT3G22080.1 TRAF-like family protein3.1e-1931.06Show/hide
Query:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGE-----------------------NLNLYDS
        F V++  ++KY T+Q  + + F+A +  WG  ++L +DTF D  NG++ + D C FGVDVIV     N E                       N N+Y S
Subjt:  FLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGE-----------------------NLNLYDS

Query:  DPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH
          F++   +W ++L+P+G  K    +LSL+L LD  + L +  +++V+ ++ VL   G  H
Subjt:  DPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACAGTCCAAGATGGAAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTT
ATTGTCACTCGACACTTTCAATGATGCTTCAAATGGGTTTTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGATGGGAACGGGGAGAATT
TGAATTTGTATGATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATAGAACTGCATCCTAGAGGACACTCCAAAGCGACGACTGGCTTTTTGTCCTTGTTCTTG
GAGCTTGATAGTTTCAAAGAGCTTTCCCAAGGTTTTCAAGTTTACGTTGAATGTGAGATGGCTGTATTGAGCCAACTTGGAGTTGGGCACAGAAATCGTACATATGGTAA
ATTAGATACTTTCTTCTGGTTTGATCTTTGGGATAACAACGCAGCCTTGATGAACTCTTGCAATCGGTTTTTTCAGCTATCCTCTAACAGACTTCTTAAGGTTGTTGAAG
CTTGGTCCGCCTCTAATCAAAGCTGGAACTTTTTCCCAAGGCGGCCCCTCCTTGATAGGGAAGCTCAAAAGCTTGGATATCCTTTGCCGAGTCCCTCCCCAAGCCAGTGC
CTTCGAAAGGCAGAGATGCTTTGCGTTGGATCCCTTCTTCAGATGGCGTTTTTTCCACCAATTCTGCCCGCTACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACAGTCCAAGATGGAAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTT
ATTGTCACTCGACACTTTCAATGATGCTTCAAATGGGTTTTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGATGGGAACGGGGAGAATT
TGAATTTGTATGATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATAGAACTGCATCCTAGAGGACACTCCAAAGCGACGACTGGCTTTTTGTCCTTGTTCTTG
GAGCTTGATAGTTTCAAAGAGCTTTCCCAAGGTTTTCAAGTTTACGTTGAATGTGAGATGGCTGTATTGAGCCAACTTGGAGTTGGGCACAGAAATCGTACATATGGTAA
ATTAGATACTTTCTTCTGGTTTGATCTTTGGGATAACAACGCAGCCTTGATGAACTCTTGCAATCGGTTTTTTCAGCTATCCTCTAACAGACTTCTTAAGGTTGTTGAAG
CTTGGTCCGCCTCTAATCAAAGCTGGAACTTTTTCCCAAGGCGGCCCCTCCTTGATAGGGAAGCTCAAAAGCTTGGATATCCTTTGCCGAGTCCCTCCCCAAGCCAGTGC
CTTCGAAAGGCAGAGATGCTTTGCGTTGGATCCCTTCTTCAGATGGCGTTTTTTCCACCAATTCTGCCCGCTACTGCTTGA
Protein sequenceShow/hide protein sequence
MFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFL
ELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFFQLSSNRLLKVVEAWSASNQSWNFFPRRPLLDREAQKLGYPLPSPSPSQC
LRKAEMLCVGSLLQMAFFPPILPATA