; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006951 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006951
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTRAF-like family protein
Genome locationscaffold10:39545061..39547866
RNA-Seq ExpressionSpg006951
SyntenySpg006951
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146377.1 uncharacterized protein LOC111015606 [Momordica charantia]1.6e-4764.47Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE
        +T SEVNV+FTFLVYD+L+DKYL VQDGK+RRFHA K EWGFEKL+SLD F++ SNGFLVDDCCAFGVD+IVMKCDG GE   +            W   
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE

Query:  LHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT
        L+P+G  KATT FLSL+L LDS K+L +G QVY+E EM+VLSQ GVGH  +T
Subjt:  LHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]9.4e-4864.38Show/hide
Query:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELH
        TSEVNV+FTFLVYD LKDKYL VQDG VRRFHAIK EWGFEKL+SLDTFND+SNGFLVDDCCAFGVDV+VMK +G                 YRWK+ L+
Subjt:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELH

Query:  PRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF
        P+G S A TGFLSL+L LDS KE+ QG +VYVE E+A+LSQLG      TY      +WF
Subjt:  PRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]3.3e-4559.76Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE
        + TSEVNV+ TFLVYD+L+D YL V DGKVRRFHA+K EWGF KL+SL+TFND+SNGFLVDDCCAFGVD+ VMK                 +E+YRWKI 
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE

Query:  LHPRGHSKATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
        LHP+G S+ + GFLSL+L  DSFKE L QG +VY E E+AVLS+ GVGH+     KL++  WF+
Subjt:  LHPRGHSKATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]1.2e-5059.56Show/hide
Query:  EVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKC-DGNGENL---------------------
        E+ VM  FLVYD+LKD+Y T+QDGKVR FHAIKKEWGFEKL+SLDTFND SNG LVDDCCAFGVDVIVMK  DGN E L                     
Subjt:  EVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKC-DGNGENL---------------------

Query:  --NLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
          N+Y+SDPFTV+NY WKIEL+PRG S A TG++S+FL  DSF++L QG +VYVE ++AVLSQLG  + N          WFD
Subjt:  --NLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

XP_038875772.1 uncharacterized protein LOC120068142 [Benincasa hispida]3.2e-4859.36Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGN-GE---------------NLN-
        +TTSEVNV+FTFLVYD L+ KYLTVQDGK+RRF A+K EWG EKLL LDTFNDASNGFLVDDCC FGVD+ VM CDG  GE                LN 
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGN-GE---------------NLN-

Query:  -------LYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
               L +S+PFTVE+YRWKI L+P G SKA +GFLS++L  DS  +L QG QVYVE EMA+LSQL       TY   + +F FD
Subjt:  -------LYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

TrEMBL top hitse value%identityAlignment
A0A0A0KND8 Uncharacterized protein1.4e-4157.14Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCD-GNGE-------------------
        +TTSEVN +FTFLVYD L+ KYLTVQDGK+RRF A K EWG EKLL L+TF DASNGFLVDDCC FGVD+ VM  D G GE                   
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCD-GNGE-------------------

Query:  ----NLNLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL
            + +L + +PFTVEN  WKI L P G  +A  GF S++L L + KE  QG QVYVE EMAVLSQL
Subjt:  ----NLNLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like4.6e-4864.38Show/hide
Query:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELH
        TSEVNV+FTFLVYD LKDKYL VQDG VRRFHAIK EWGFEKL+SLDTFND+SNGFLVDDCCAFGVDV+VMK +G                 YRWK+ L+
Subjt:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIELH

Query:  PRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF
        P+G S A TGFLSL+L LDS KE+ QG +VYVE E+A+LSQLG      TY      +WF
Subjt:  PRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWF

A0A6J1CYF6 uncharacterized protein LOC1110156111.6e-4559.76Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE
        + TSEVNV+ TFLVYD+L+D YL V DGKVRRFHA+K EWGF KL+SL+TFND+SNGFLVDDCCAFGVD+ VMK                 +E+YRWKI 
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE

Query:  LHPRGHSKATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
        LHP+G S+ + GFLSL+L  DSFKE L QG +VY E E+AVLS+ GVGH+     KL++  WF+
Subjt:  LHPRGHSKATTGFLSLFLELDSFKE-LSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

A0A6J1CZF3 uncharacterized protein LOC1110156067.8e-4864.47Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE
        +T SEVNV+FTFLVYD+L+DKYL VQDGK+RRFHA K EWGFEKL+SLD F++ SNGFLVDDCCAFGVD+IVMKCDG GE   +            W   
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKIE

Query:  LHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT
        L+P+G  KATT FLSL+L LDS K+L +G QVY+E EM+VLSQ GVGH  +T
Subjt:  LHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRT

A0A6J1CZF7 uncharacterized protein LOC1110156104.9e-4258.28Show/hide
Query:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNL----------YDSDPFTV
        T ++ V+FT LVYD+L+D YL V DGKVRRFHA+KKEWGFEKL+SL+TFND+SNGFLVDDCCAFGVD+ VMKCDG GE L+L          + ++ F+ 
Subjt:  TSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNL----------YDSDPFTV

Query:  ENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQ
         +   K+ L+P+G  KA+  +LSLFL  +S KEL QG +VY E E+AVLS+
Subjt:  ENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQ

SwissProt top hitse value%identityAlignment
Q9C870 MATH domain and coiled-coil domain-containing protein At1g313906.6e-0430.51Show/hide
Query:  DSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL
        DSD F V + +W +  +P+G+ ++T   LSL+L +  F+ L  G++ +++  + V++Q+
Subjt:  DSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQL

Q9M2H5 MATH domain and coiled-coil domain-containing protein At3g584101.3e-0432.47Show/hide
Query:  SDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD
        S PF + + +W++ ++P+G++     +LSLFLE+  FK L  G++ YV+  + ++ QL    R        T  WFD
Subjt:  SDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFD

Arabidopsis top hitse value%identityAlignment
AT1G69660.1 TRAF-like family protein1.3e-1831.4Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDC-CAFGVDVIVM------------------KCDGNGEN
        T  +E      F VY+  ++KY T+QD +V+RF+A++  WG  K+LS DTF +  NGF+ +   C FGVDV+V                   K   N +N
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDC-CAFGVDVIVM------------------KCDGNGEN

Query:  LNLYDSDPFTVENY-----RWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH
         +    D +T   Y      W ++L+P+G+S+A   +LSL++ L   + L    + + +  + VL+ LG  H
Subjt:  LNLYDSDPFTVENY-----RWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH

AT2G15710.1 TRAF-like family protein1.4e-2030.9Show/hide
Query:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIV------------------MKCDGNGEN
        T+  EV     F VY+  ++KY T+QD +V+RF+A++  WG  ++LSL+TFND  NG+  + + C FGVDV+V                  +K   + ++
Subjt:  TTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIV------------------MKCDGNGEN

Query:  LNL-----YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYG
         ++     Y S+ F++    W ++++P+G  +    +LS+FL L   + L+   ++YV   + VL  LG   R+R  G
Subjt:  LNL-----YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYG

AT3G17380.1 TRAF-like family protein1.8e-2534.6Show/hide
Query:  EVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMK--CDGNGENLNL------------------
        EV  +F   + D  KD YL +Q G  RRFH++K+EWGF+K +   TF+DASNG+L++D C FG DV V K    G GE L++                  
Subjt:  EVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMK--CDGNGENLNL------------------

Query:  -----YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFF
             YDS+ F   + +WKIE +P G  + T   LS++L L   + +S G +++VE  + +  QL   H     GK+  +F     ++      S   F 
Subjt:  -----YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFF

Query:  QLSSNRLLKVV
        Q +S  LLK V
Subjt:  QLSSNRLLKVV

AT3G20360.1 TRAF-like family protein1.7e-1532.22Show/hide
Query:  YIVLWTTT-----SEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGENLNL-----
        Y+VL  +T      EV+V   F V++  + KY T+QD  V RF AIK+ WGF K+L L TFN+  NG+L D D C FGVDVI+       E  ++     
Subjt:  YIVLWTTT-----SEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGENLNL-----

Query:  -----------------YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLEL--DSFKELSQGFQVYVECEMAVLSQLG
                         Y S+ F +    W + +   G        LSL+L L      +     +VYV  ++ V +Q G
Subjt:  -----------------YDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLEL--DSFKELSQGFQVYVECEMAVLSQLG

AT3G22080.1 TRAF-like family protein1.0e-2031.43Show/hide
Query:  VLWTTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGE----------------
        +L T T+EV     F V++  ++KY T+Q  + + F+A +  WG  ++L +DTF D  NG++ + D C FGVDVIV     N E                
Subjt:  VLWTTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVD-DCCAFGVDVIVMKCDGNGE----------------

Query:  -------NLNLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH
               N N+Y S  F++   +W ++L+P+G  K    +LSL+L LD  + L +  +++V+ ++ VL   G  H
Subjt:  -------NLNLYDSDPFTVENYRWKIELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCAACTGGCATAAGACTTATATTGTTCTATGGACTACTACTTCTGAGGTTAATGTCATGTTCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACAGTCCA
AGATGGAAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTATTGTCACTCGACACTTTCAATGATGCTTCAAATGGGTTTTTGGTTGATGATT
GTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGATGGGAACGGGGAGAATTTGAATTTGTATGATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATA
GAACTGCATCCTAGAGGACACTCCAAAGCGACGACTGGCTTTTTGTCCTTGTTCTTGGAGCTTGATAGTTTCAAAGAGCTTTCCCAAGGTTTTCAAGTTTACGTTGAATG
TGAGATGGCTGTATTGAGCCAACTTGGAGTTGGGCACAGAAATCGTACATATGGTAAATTAGATACTTTCTTCTGGTTTGATCTTTGGGATAACAACGCAGCCTTGATGA
ACTCTTGCAATCGGTTTTTTCAGCTATCCTCTAACAGACTTCTTAAGGTTGTTGAAGCTTGGTCCGCCTCTAATCAAAGCTGGAACTTTTTCCCAAGGCGGCCCCTCCTT
GATAGGGAAGCTCAAAAGCTTGGATATCCTTTGCCGAGTCCCTCCCCAAGCCAGTGCCTTCGAAAGGCAGAGATGCTTTGCGTTGGATCCCTTCTTCAGATGGCGTTTTT
TCCACCAATTCTGCCCGCTACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAACTGGCATAAGACTTATATTGTTCTATGGACTACTACTTCTGAGGTTAATGTCATGTTCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACAGTCCA
AGATGGAAAAGTAAGACGTTTTCATGCCATCAAGAAAGAGTGGGGTTTTGAAAAGTTATTGTCACTCGACACTTTCAATGATGCTTCAAATGGGTTTTTGGTTGATGATT
GTTGTGCATTTGGAGTTGACGTTATTGTTATGAAATGTGATGGGAACGGGGAGAATTTGAATTTGTATGATTCCGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATA
GAACTGCATCCTAGAGGACACTCCAAAGCGACGACTGGCTTTTTGTCCTTGTTCTTGGAGCTTGATAGTTTCAAAGAGCTTTCCCAAGGTTTTCAAGTTTACGTTGAATG
TGAGATGGCTGTATTGAGCCAACTTGGAGTTGGGCACAGAAATCGTACATATGGTAAATTAGATACTTTCTTCTGGTTTGATCTTTGGGATAACAACGCAGCCTTGATGA
ACTCTTGCAATCGGTTTTTTCAGCTATCCTCTAACAGACTTCTTAAGGTTGTTGAAGCTTGGTCCGCCTCTAATCAAAGCTGGAACTTTTTCCCAAGGCGGCCCCTCCTT
GATAGGGAAGCTCAAAAGCTTGGATATCCTTTGCCGAGTCCCTCCCCAAGCCAGTGCCTTCGAAAGGCAGAGATGCTTTGCGTTGGATCCCTTCTTCAGATGGCGTTTTT
TCCACCAATTCTGCCCGCTACTGCTTGA
Protein sequenceShow/hide protein sequence
LNWHKTYIVLWTTTSEVNVMFTFLVYDHLKDKYLTVQDGKVRRFHAIKKEWGFEKLLSLDTFNDASNGFLVDDCCAFGVDVIVMKCDGNGENLNLYDSDPFTVENYRWKI
ELHPRGHSKATTGFLSLFLELDSFKELSQGFQVYVECEMAVLSQLGVGHRNRTYGKLDTFFWFDLWDNNAALMNSCNRFFQLSSNRLLKVVEAWSASNQSWNFFPRRPLL
DREAQKLGYPLPSPSPSQCLRKAEMLCVGSLLQMAFFPPILPATA