; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006952 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006952
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChitinase family protein
Genome locationscaffold10:39866255..39866716
RNA-Seq ExpressionSpg006952
SyntenySpg006952
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006032 - chitin catabolic process (biological process)
GO:0006952 - defense response (biological process)
GO:0016998 - cell wall macromolecule catabolic process (biological process)
GO:0004568 - chitinase activity (molecular function)
GO:0008061 - chitin binding (molecular function)
InterPro domainsIPR000726 - Glycoside hydrolase, family 19, catalytic
IPR023346 - Lysozyme-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579149.1 Chitinase 10, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7284.62Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS  LFLSFI LLG G PST    GHRR RE S VAS++SEELFK LFLHKDDS CPANGFY+YQ+FIEATK+F KFGTTGCLATRKREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

XP_022938622.1 chitinase 10-like [Cucurbita moschata]3.2e-7284.62Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS  LFLSFI LLG GLPST    GHRR RE S VAS++SEELFK LFLHKD+S CPANGFY+YQ+FIEATK+F KFGTTGCLATRKREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

XP_022993095.1 chitinase 10-like [Cucurbita maxima]1.7e-7385.9Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS FLFLSFI LLG GLPST    GHRR RE S VAS++SEELFK LFLHKDDS CPANGFY+YQ+FIEATK+F KFGTTGCLATRKREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

XP_023550747.1 chitinase 10-like [Cucurbita pepo subsp. pepo]4.1e-7284.62Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS FLFLSFI LL  GLPST    GHRR RE S VAS++SEELFK LFLHKDDS CPANGFY+YQ+FIEATK+F KFGTTGCLAT+KREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

XP_038875572.1 chitinase 10-like [Benincasa hispida]2.2e-7386.36Show/hide
Query:  MASNFLFLSFILLLGIGLPS-TEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET
        MAS FLFLSFI LLG GLPS TEGH RR +IS V+S+VSE+LFK LFLHKDDS CPANGFY+YQAFIEAT RF KFGTTGCLATRKRE+AAFLAQISHET
Subjt:  MASNFLFLSFILLLGIGLPS-TEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET

Query:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        TGGWATAPDGPFAWGLCFKEE+NPQSNYCD SV QWPC PGKSYKGRGPIQLSW
Subjt:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

TrEMBL top hitse value%identityAlignment
A0A0A0KPY3 Glyco_hydro_19_cat domain-containing protein8.4e-7182.47Show/hide
Query:  MASNFLFLSFILLLGIGLP-STEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET
        M S FLFLSFIL LG  LP  TEGHRRR +I  ++S++SEELFK LFLHKDD  CPANGFY+YQAFIEAT RF KFGTTGCLATRKREIAAFLAQISHET
Subjt:  MASNFLFLSFILLLGIGLP-STEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET

Query:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        TGGWATAP+GPFAWGLCFKEE++PQSNYCD SV +WPCSPGKSYKGRGPIQLSW
Subjt:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

A0A1S3CQS5 chitinase 103.5e-6982.47Show/hide
Query:  MASNFLFLSFILLLGIGLPS-TEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET
        M S  LFLSFILLL   LPS TE + RR +I  ++S++SEELFK LFLHKDDS CPANGFY+YQAFIEATKRF KFGTTGCLATRKREIAAFLAQISHET
Subjt:  MASNFLFLSFILLLGIGLPS-TEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHET

Query:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        TGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPC PGKSYKGRGPIQLSW
Subjt:  TGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

A0A5A7U2X7 Chitinase 107.6e-6484.85Show/hide
Query:  EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEV
        E + RR +I  ++S++SEELFK LFLHKDDS CPANGFY+YQAFIEATKRF KFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEE+
Subjt:  EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEV

Query:  NPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        +PQSNYCD SV QWPC PGKSYKGRGPIQLSW
Subjt:  NPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

A0A6J1FEL0 chitinase 10-like1.5e-7284.62Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS  LFLSFI LLG GLPST    GHRR RE S VAS++SEELFK LFLHKD+S CPANGFY+YQ+FIEATK+F KFGTTGCLATRKREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

A0A6J1JXK4 chitinase 10-like8.1e-7485.9Show/hide
Query:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH
        MAS FLFLSFI LLG GLPST    GHRR RE S VAS++SEELFK LFLHKDDS CPANGFY+YQ+FIEATK+F KFGTTGCLATRKREIAAFLAQISH
Subjt:  MASNFLFLSFILLLGIGLPST---EGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISH

Query:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ETTGGWATAPDGPFAWGLCFKEE++PQSNYCD SV QWPCSPGKSYKGRGPIQLSW
Subjt:  ETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

SwissProt top hitse value%identityAlignment
P11955 26 kDa endochitinase 12.5e-4367.5Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV
        V+SIVS  LF  + LH++D  C A GFYTY AF+ A   F  FGTTG   TRKRE+AAFLAQ SHETTGGWATAPDG FAWG CFK+E    SNYC  S 
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV

Query:  VQWPCSPGKSYKGRGPIQLS
         QWPC+PGKSY GRGPIQLS
Subjt:  VQWPCSPGKSYKGRGPIQLS

Q09023 Endochitinase CH251.7e-4463.64Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV
        ++ I+S   F ++  H++D+ CPA GFYTY AFI A K F  FGTTG  ATRK+EIAAF  Q SHETTGGWATAPDGP++WG CFK+E NP SNYC  S 
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV

Query:  VQWPCSPGKSYKGRGPIQLSW
         +WPC+ GKSY GRGP+QLSW
Subjt:  VQWPCSPGKSYKGRGPIQLSW

Q5NB11 Chitinase 102.1e-5573.98Show/hide
Query:  SPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDA
        SPV+SIVSE+L+ +LFLHKDD+ CPA GFYTY +F+ A  RF +F  TGC   RKRE+AAFLAQISHETTGGWATAPDGP+AWGLC+KEE+NPQS+YCDA
Subjt:  SPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDA

Query:  SVVQWPCSPGKSYKGRGPIQLSW
        +  QWPC PGKSY GRGPIQ+SW
Subjt:  SVVQWPCSPGKSYKGRGPIQLSW

Q7DNA1 Chitinase 22.5e-4363.64Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV
        V SIV  +LF+ L LH++D  CPA GFYTY+AF+ A   F  FG TG   TRKRE+AAFL Q SHETTGGW TAPDGPF+WG CFK+E NP S+YC  S 
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV

Query:  VQWPCSPGKSYKGRGPIQLSW
         +WPC+PG+ Y GRGPIQLS+
Subjt:  VQWPCSPGKSYKGRGPIQLSW

Q9FRV1 Basic endochitinase A2.5e-4367.5Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV
        V+SIVS  LF  + LH++D  C A GFYTY AF+ A   F  FGTTG   TRKRE+AAFLAQ SHETTGGWATAPDG FAWG CFK+E    SNYC  S 
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV

Query:  VQWPCSPGKSYKGRGPIQLS
         QWPC+PGKSY GRGPIQLS
Subjt:  VQWPCSPGKSYKGRGPIQLS

Arabidopsis top hitse value%identityAlignment
AT1G02360.1 Chitinase family protein4.6e-5358.67Show/hide
Query:  NFLFLSFILLLGIGLPSTEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGW
        +FL L F L +   L S +      E + +  +V  +L+  +F+HKD++ CPANGFYTY++F++AT+RF +FG+ G   T++ E+AAFLAQISHETTGGW
Subjt:  NFLFLSFILLLGIGLPSTEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGW

Query:  ATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        ATAPDGP+AWGLCFKEEV+PQS YCD+S  QWPC P K+Y+GRGPIQLSW
Subjt:  ATAPDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW

AT3G12500.1 basic chitinase3.9e-4461.16Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV
        ++ I+S   F ++  H++D+ CPA GFYTY AFI A K F  FGTTG  ATRK+E+AAF  Q SHETTGGWATAPDGP++WG CFK+E NP S+YC+ S 
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV

Query:  VQWPCSPGKSYKGRGPIQLSW
          WPC+ GK Y GRGP+QLSW
Subjt:  VQWPCSPGKSYKGRGPIQLSW

AT3G16920.1 chitinase-like protein 21.6e-2140Show/hide
Query:  FKNLFLHKDDSVCPANGFYTYQAFIEATKRFSK--FGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV-VQWPCS
        F+NLF  ++  V  A GF+ Y++FI A   +    FGT G      +E+AAFL  +  +T+ G+  A  GP AWGLC+ +E++P   YCD    + +PC+
Subjt:  FKNLFLHKDDSVCPANGFYTYQAFIEATKRFSK--FGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQSNYCDASV-VQWPCS

Query:  PGKSYKGRGPIQLSW
        PG SY GRG + + W
Subjt:  PGKSYKGRGPIQLSW

AT3G54420.1 homolog of carrot EP3-3 chitinase9.3e-2244.26Show/hide
Query:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQS-NYCDAS
        VA IV++E F N  + +  S C  N FY+  AF+EA   +S+FG  G     +REIAAF A ++HET         G F    C+ EE++  S +YCD +
Subjt:  VASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVNPQS-NYCDAS

Query:  VVQWPCSPGKSYKGRGPIQLSW
          Q+PC+P K Y GRGPIQLSW
Subjt:  VVQWPCSPGKSYKGRGPIQLSW

AT4G01700.1 Chitinase family protein8.3e-5563.27Show/hide
Query:  LSFILLLGIGLPSTEGHRRRR-EISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATA
        L FI  +   L  TE  +  + + +P+ S+V   L+  +F+HKD++ CPA GFY Y+AF+EAT+ F KFG+ G   TR+RE+AAFLAQISHETTGGWATA
Subjt:  LSFILLLGIGLPSTEGHRRRR-EISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATA

Query:  PDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW
        PDGP+AWGLCFKEEV+PQSNYCDAS   WPC  GKSYKGRGPIQLSW
Subjt:  PDGPFAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAACTTCTTATTCCTCTCCTTCATCTTACTTCTCGGGATCGGCCTCCCGTCGACAGAGGGTCACCGACGTCGGAGGGAAATATCCCCTGTAGCTTCTATTGT
TAGCGAAGAACTTTTTAAGAACTTGTTTTTGCATAAGGATGATAGTGTATGTCCAGCGAATGGGTTCTACACTTACCAAGCTTTCATTGAAGCAACGAAGAGATTTTCCA
AATTTGGCACGACAGGGTGTTTGGCAACACGAAAGAGGGAGATTGCAGCGTTTTTGGCTCAGATCTCGCACGAGACAACGGGCGGGTGGGCGACTGCCCCGGATGGACCT
TTTGCTTGGGGGTTGTGCTTTAAAGAGGAAGTGAATCCACAAAGCAACTATTGTGATGCTAGTGTTGTGCAGTGGCCTTGTTCTCCGGGCAAGTCCTACAAAGGAAGAGG
GCCTATTCAACTATCATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAACTTCTTATTCCTCTCCTTCATCTTACTTCTCGGGATCGGCCTCCCGTCGACAGAGGGTCACCGACGTCGGAGGGAAATATCCCCTGTAGCTTCTATTGT
TAGCGAAGAACTTTTTAAGAACTTGTTTTTGCATAAGGATGATAGTGTATGTCCAGCGAATGGGTTCTACACTTACCAAGCTTTCATTGAAGCAACGAAGAGATTTTCCA
AATTTGGCACGACAGGGTGTTTGGCAACACGAAAGAGGGAGATTGCAGCGTTTTTGGCTCAGATCTCGCACGAGACAACGGGCGGGTGGGCGACTGCCCCGGATGGACCT
TTTGCTTGGGGGTTGTGCTTTAAAGAGGAAGTGAATCCACAAAGCAACTATTGTGATGCTAGTGTTGTGCAGTGGCCTTGTTCTCCGGGCAAGTCCTACAAAGGAAGAGG
GCCTATTCAACTATCATGGTAA
Protein sequenceShow/hide protein sequence
MASNFLFLSFILLLGIGLPSTEGHRRRREISPVASIVSEELFKNLFLHKDDSVCPANGFYTYQAFIEATKRFSKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGP
FAWGLCFKEEVNPQSNYCDASVVQWPCSPGKSYKGRGPIQLSW