; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006974 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006974
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationscaffold10:38757226..38757672
RNA-Seq ExpressionSpg006974
SyntenySpg006974
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601820.1 hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6989.4Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRR ALP+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-7090.07Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_022963063.1 uncharacterized protein LOC111463373 [Cucurbita moschata]4.6e-6888.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G   WHPGSPRPGWTGFR+KYLLRKTWRP+LA IPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]1.6e-6888.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK+LSRSNTLKDLFVSSPPYD ++ EINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

XP_038875200.1 uncharacterized protein LOC120067717 [Benincasa hispida]4.1e-6990.07Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP RRALPEKKRDDHKELSRSNTLKDLFVSSPPY  TDG+I+E   AAP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        R+ T VCKEK DGEVGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein1.5e-6485.62Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LPE K RDD K LSRSNTLKDLFVSSPPY GTD ++++    AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAP

Query:  IRNVTPVC-KEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
         RNVTPVC KEK +G VGSPGW+PGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  IRNVTPVC-KEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A5D3BMD8 Uncharacterized protein3.7e-6385.81Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---A
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALPE KKRDDHK LSRSNTLKDLFVSSPPY GTD +++E    
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---A

Query:  APIRNVTPVC-KEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        AP +N TPVC KEK +G VGSPGW+PGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  APIRNVTPVC-KEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1DFV6 uncharacterized protein LOC1110200647.9e-6686.84Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINEAAPIR--
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALP+KKR DH +L+RSNTLKDLFVSSPPYDG DGEI EAA     
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINEAAPIR--

Query:  --NVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
          N+ PVCKEK DGEVGS GW PGSPRP WTGFRYKYLLRKTWRPVLAGIPE
Subjt:  --NVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1HGM7 uncharacterized protein LOC1114633732.2e-6888.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G   WHPGSPRPGWTGFR+KYLLRKTWRP+LA IPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

A0A6J1I9M9 uncharacterized protein LOC1114704931.6e-6687.42Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS     RRRALP+KKRDDHK+LSRSNTLKDLFVSSPPYD +DGEINE   AAPI
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINE---AAPI

Query:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        RNVTPVC+E+ DGE+G  GWHPGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Subjt:  RNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown1.3e-1542.42Show/hide
Query:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSP--RRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDG---------
        SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLTR+S R R P  +      KK D   ++  S  L DLFVSSPP++ + G         
Subjt:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSP--RRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDG---------

Query:  ---EINEAAPIRNVTPVCKEKGDGE---VGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
           E+    P+  V+      G GE       G++ GS RP  +      LLR++WRPVL  IPE
Subjt:  ---EINEAAPIRNVTPVCKEKGDGE---VGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

AT1G68430.1 unknown protein5.9e-1340.85Show/hide
Query:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSP-----------PYDG
        MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+      SP RR         HK+++    LKDLFVSS            P   
Subjt:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSP-----------PYDG

Query:  TDGEI--NEAAPIRNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        T  E+    AA +   + +  E  D              P W GF  K LL++ WRP L  I E
Subjt:  TDGEI--NEAAPIRNVTPVCKEKGDGEVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE

AT5G16200.1 50S ribosomal protein-related2.5e-1138.98Show/hide
Query:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRRALPE----------KKRDDHKELSRSNTLKDLFVS--SPP
        ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  RR   R+ L E          KKR +H+   R   L++L V+  SPP
Subjt:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRRALPE----------KKRDDHKELSRSNTLKDLFVS--SPP

Query:  Y------DGTDGEINEAAPIRNVTPVCKEKGDG------EVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
        Y      DG   E +E +P+ NVT      GDG        GS G            FR + +LRK WRPVL  IPE
Subjt:  Y------DGTDGEINEAAPIRNVTPVCKEKGDG------EVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACACACTGCGGCGTCGCTCAGAGTCCGACCTTGAGCCCTAGGACCAGCCCTCTCGTTCATCTCCGCCGCCGGAAAAC
CACCTTGCGGATGCTCCTCACTCGGAATTCCGGCCGCCGCTCCCCTCGCCGCCGTGCCCTGCCGGAGAAGAAGAGAGACGATCACAAGGAATTGTCGCGAAGCAACACGT
TGAAGGATCTCTTCGTGTCGTCGCCGCCGTACGACGGAACCGACGGCGAGATTAACGAGGCGGCTCCGATCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGGGGATGGT
GAGGTTGGATCGCCCGGTTGGCATCCCGGTTCACCTAGACCGGGATGGACCGGTTTCCGATACAAATACTTGCTACGGAAAACCTGGCGGCCGGTGCTCGCCGGAATCCC
TGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACACACTGCGGCGTCGCTCAGAGTCCGACCTTGAGCCCTAGGACCAGCCCTCTCGTTCATCTCCGCCGCCGGAAAAC
CACCTTGCGGATGCTCCTCACTCGGAATTCCGGCCGCCGCTCCCCTCGCCGCCGTGCCCTGCCGGAGAAGAAGAGAGACGATCACAAGGAATTGTCGCGAAGCAACACGT
TGAAGGATCTCTTCGTGTCGTCGCCGCCGTACGACGGAACCGACGGCGAGATTAACGAGGCGGCTCCGATCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGGGGATGGT
GAGGTTGGATCGCCCGGTTGGCATCCCGGTTCACCTAGACCGGGATGGACCGGTTTCCGATACAAATACTTGCTACGGAAAACCTGGCGGCCGGTGCTCGCCGGAATCCC
TGAGTAA
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKELSRSNTLKDLFVSSPPYDGTDGEINEAAPIRNVTPVCKEKGDG
EVGSPGWHPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE