; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006977 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006977
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor DYT1
Genome locationscaffold10:39448458..39448905
RNA-Seq ExpressionSpg006977
SyntenySpg006977
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016829 - lyase activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601683.1 Transcription factor DYT1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3774.58Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYI+QLQK V+ILK QLVELE S+EK  WP  P D        KSYIQ DV VSQIDEH LWIKILFEKRKGAFTKLIQA+NS+GFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSIIN
        DTSVTTV+GAVL+T++IN
Subjt:  DTSVTTVKGAVLLTSIIN

XP_022146507.1 transcription factor DYT1, partial [Momordica charantia]2.0e-4279.49Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID
        MNKATII+DAITYIQQLQ+ VDILK QLVELEASSEK +WP PRDI+A I++K+SYIQ DVRV+QIDE  LW+KILFEK+KGAFTKLIQ L+S GFELID
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID

Query:  TSVTTVKGAVLLTSIIN
         SVTTVKGAVL+T+IIN
Subjt:  TSVTTVKGAVLLTSIIN

XP_022930020.1 transcription factor DYT1 [Cucurbita moschata]4.3e-3773.73Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYI+QLQK V+ILK QLVELE S+EK  WP  P+D        K YIQ DV VSQIDEH LWIKILFEKRKGAFTKLIQA+NS+GFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSIIN
        DTSVTTV+GAVL+T++IN
Subjt:  DTSVTTVKGAVLLTSIIN

XP_022994545.1 transcription factor DYT1 [Cucurbita maxima]2.5e-3774.58Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYI+QLQK V+ILK QLVELE S+EK  WP  P D        KSYIQ DV VSQIDEH LWIKILFEKRKGAFTKLIQA+NS+GFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSIIN
        DTSVTTV+GAVL+T++IN
Subjt:  DTSVTTVKGAVLLTSIIN

XP_023876547.1 transcription factor DYT1-like [Quercus suber]1.7e-2554.31Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID
        MNKATII+DAI+YI++LQ  V +L+  L E+EASSE+   P   +I  + +++KS IQ +V V+QID + LWIKI+FEK++G FT+L++A+ + GFELID
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID

Query:  TSVTTVKGAVLLTSII
        TSVTT KGA+L++S +
Subjt:  TSVTTVKGAVLLTSII

TrEMBL top hitse value%identityAlignment
A0A5N6Q8F9 BHLH domain-containing protein1.4e-2553.85Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWP-PPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYIQ LQ  V++L+ QL E+EASSE+   P    +  A+ ++KKS IQ +V  +QIDE+ LW+KI+FEK++G F++L++A+ +LGFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWP-PPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSII
        DT+VT+ KGA+L++S +
Subjt:  DTSVTTVKGAVLLTSII

A0A6J1CZR8 transcription factor DYT19.7e-4379.49Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID
        MNKATII+DAITYIQQLQ+ VDILK QLVELEASSEK +WP PRDI+A I++K+SYIQ DVRV+QIDE  LW+KILFEK+KGAFTKLIQ L+S GFELID
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID

Query:  TSVTTVKGAVLLTSIIN
         SVTTVKGAVL+T+IIN
Subjt:  TSVTTVKGAVLLTSIIN

A0A6J1EVV3 transcription factor DYT12.1e-3773.73Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYI+QLQK V+ILK QLVELE S+EK  WP  P+D        K YIQ DV VSQIDEH LWIKILFEKRKGAFTKLIQA+NS+GFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSIIN
        DTSVTTV+GAVL+T++IN
Subjt:  DTSVTTVKGAVLLTSIIN

A0A6J1K1J3 transcription factor DYT11.2e-3774.58Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI
        MNKATII+DAITYI+QLQK V+ILK QLVELE S+EK  WP  P D        KSYIQ DV VSQIDEH LWIKILFEKRKGAFTKLIQA+NS+GFEL 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP-PRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELI

Query:  DTSVTTVKGAVLLTSIIN
        DTSVTTV+GAVL+T++IN
Subjt:  DTSVTTVKGAVLLTSIIN

A0A6P5RWY1 transcription factor DYT1-like8.2e-2654.31Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID
        MNKATII+DAITYI +LQKTV++LK QL ++EAS E+   P   +I+A+ ++KK  IQ  V V+QID + LW+K + EK++G FTKL++A+ + GFEL D
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELID

Query:  TSVTTVKGAVLLTSII
        TSVTT  GA+L++S +
Subjt:  TSVTTVKGAVLLTSII

SwissProt top hitse value%identityAlignment
O81900 Transcription factor DYT13.7e-1536.29Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEAS--------SEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALN
        M KA+I++DAITYI +LQ  V  L     E+E +        ++ ++ P       + ++KK  I+ +V++ +I E   W+KI+ EKR G FTK ++ + 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEAS--------SEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALN

Query:  SLGFELIDTSVTTVKGAVLLTSII
         LGFE+ID S+TT  GA+L+++ +
Subjt:  SLGFELIDTSVTTVKGAVLLTSII

Q2HIV9 Transcription factor bHLH356.5e-0428.46Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK
        M+KA+II DAI+YI+ LQ     L+ ++ ELE+   SS        RD+   +  KK          S I+  +++V+ + E T+ + +   KR     K
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK

Query:  LIQALNSLGFELIDTSVTTVKGAVLLTSII
        L +   SL  +++ +++T+  G +  T  I
Subjt:  LIQALNSLGFELIDTSVTTVKGAVLLTSII

Q6YUS3 Transcription factor TDR1.0e-0427.1Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQL----VELEASSEKILWPPPRDI---------------------------------KASIDLKKS-------Y
        M++A+I+ DAI YI  LQK V  L+ +L    V  +     I  PPP  +                                  A  D K          
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQL----VELEASSEKILWPPPRDI---------------------------------KASIDLKKS-------Y

Query:  IQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELIDTSVTTVKGAVL
        ++  + V Q+  + L++++L+E + G F +L+ A+N+LG E+I+ +VTT K  VL
Subjt:  IQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELIDTSVTTVKGAVL

Q9ZVX2 Transcription factor ABORTED MICROSPORES9.1e-0625.95Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP----------------------PRDIKASIDLKKSYIQG-----DVRVSQIDEHTLWI
        +++A+I+ DAI Y+++LQ     L+ +L E   + +    P                          +K  +DL+ S  +G      V V+Q+D    ++
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP----------------------PRDIKASIDLKKSYIQG-----DVRVSQIDEHTLWI

Query:  KILFEKRKGAFTKLIQALNSLGFELIDTSVT
        K++ E + G FT+L++AL+SLG E+ + + T
Subjt:  KILFEKRKGAFTKLIQALNSLGFELIDTSVT

Arabidopsis top hitse value%identityAlignment
AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.5e-0725.95Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP----------------------PRDIKASIDLKKSYIQG-----DVRVSQIDEHTLWI
        +++A+I+ DAI Y+++LQ     L+ +L E   + +    P                          +K  +DL+ S  +G      V V+Q+D    ++
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPP----------------------PRDIKASIDLKKSYIQG-----DVRVSQIDEHTLWI

Query:  KILFEKRKGAFTKLIQALNSLGFELIDTSVT
        K++ E + G FT+L++AL+SLG E+ + + T
Subjt:  KILFEKRKGAFTKLIQALNSLGFELIDTSVT

AT4G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.6e-1636.29Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEAS--------SEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALN
        M KA+I++DAITYI +LQ  V  L     E+E +        ++ ++ P       + ++KK  I+ +V++ +I E   W+KI+ EKR G FTK ++ + 
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEAS--------SEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALN

Query:  SLGFELIDTSVTTVKGAVLLTSII
         LGFE+ID S+TT  GA+L+++ +
Subjt:  SLGFELIDTSVTTVKGAVLLTSII

AT5G57150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0528.46Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK
        M+KA+II DAI+YI+ LQ     L+ ++ ELE+   SS        RD+   +  KK          S I+  +++V+ + E T+ + +   KR     K
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK

Query:  LIQALNSLGFELIDTSVTTVKGAVLLTSII
        L +   SL  +++ +++T+  G +  T  I
Subjt:  LIQALNSLGFELIDTSVTTVKGAVLLTSII

AT5G57150.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0528.46Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK
        M+KA+II DAI+YI+ LQ     L+ ++ ELE+   SS        RD+   +  KK          S I+  +++V+ + E T+ + +   KR     K
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK

Query:  LIQALNSLGFELIDTSVTTVKGAVLLTSII
        L +   SL  +++ +++T+  G +  T  I
Subjt:  LIQALNSLGFELIDTSVTTVKGAVLLTSII

AT5G57150.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0528.46Show/hide
Query:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK
        M+KA+II DAI+YI+ LQ     L+ ++ ELE+   SS        RD+   +  KK          S I+  +++V+ + E T+ + +   KR     K
Subjt:  MNKATIIDDAITYIQQLQKTVDILKHQLVELEA---SSEKILWPPPRDIKASIDLKK----------SYIQG-DVRVSQIDEHTLWIKILFEKRKGAFTK

Query:  LIQALNSLGFELIDTSVTTVKGAVLLTSII
        L +   SL  +++ +++T+  G +  T  I
Subjt:  LIQALNSLGFELIDTSVTTVKGAVLLTSII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAAGCAACCATCATCGACGACGCTATAACGTACATCCAGCAGCTACAGAAGACGGTTGACATTCTCAAACACCAGCTTGTTGAATTGGAGGCCTCATCTGAAAA
AATATTATGGCCACCACCACGAGATATTAAAGCGTCAATAGACTTAAAGAAGAGTTATATTCAGGGAGACGTGAGGGTTTCTCAAATTGACGAACACACACTCTGGATTA
AAATACTTTTCGAGAAGCGGAAAGGCGCATTCACTAAATTAATTCAAGCGTTGAATTCTCTAGGCTTTGAACTCATTGATACTAGTGTCACCACAGTAAAAGGAGCAGTT
CTCTTAACCAGCATTATCAAC
mRNA sequenceShow/hide mRNA sequence
ATGAATAAAGCAACCATCATCGACGACGCTATAACGTACATCCAGCAGCTACAGAAGACGGTTGACATTCTCAAACACCAGCTTGTTGAATTGGAGGCCTCATCTGAAAA
AATATTATGGCCACCACCACGAGATATTAAAGCGTCAATAGACTTAAAGAAGAGTTATATTCAGGGAGACGTGAGGGTTTCTCAAATTGACGAACACACACTCTGGATTA
AAATACTTTTCGAGAAGCGGAAAGGCGCATTCACTAAATTAATTCAAGCGTTGAATTCTCTAGGCTTTGAACTCATTGATACTAGTGTCACCACAGTAAAAGGAGCAGTT
CTCTTAACCAGCATTATCAAC
Protein sequenceShow/hide protein sequence
MNKATIIDDAITYIQQLQKTVDILKHQLVELEASSEKILWPPPRDIKASIDLKKSYIQGDVRVSQIDEHTLWIKILFEKRKGAFTKLIQALNSLGFELIDTSVTTVKGAV
LLTSIIN