CuGenDBv2

Gene ID	Spg007001
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ELL-associated factor 2
Genome location	scaffold10:38034238..38037562
RNA-Seq Expression	Spg007001
Synteny	Spg007001
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579241.1 Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-157

88.54

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA V+     A+ST+AS  HSLT PEPRLSPP AKV KPMHMGR SFP+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+DAGFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_022151706.1 ELL-associated factor 1 [Momordica charantia]

1.5e-141

82.91

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MAN+NKEEP+TAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAV  LRHVRQ  ES          A  S T SVPHSLTVPEPRLSPPVAKV KPMHMGRSSFP VPVEVERIDIGEPGNTGA SVAASK +AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA
        Y+SDPPNVSAPSP P   NDDEHQDIDID+IFGSVSSDDGNNVEEEK+D GFDINVPH NDTDDEIADVDDSGDEA+KGPNAAE                
Subjt:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA

Query:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
          ALRAQVNAEGRD QTSSSSSSESGSGSSSGSSSGSSDSE SDEDSVTSI
Subjt:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

6.6e-158

88.83

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA V+    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR SFP+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+DAGFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

3.5e-159

89.4

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AAGV+    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR SFP+V VEVE+IDIGEPGNTGAKSV ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+DAGFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

3.9e-158

87.43

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAA---------GVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKS
        RLERLHRAVKQLRH+RQPGESAAA         GV+A    + S  AS  HSLT PEPRLSPPVAKVAKPMHMGR SFP +PVEVERIDIGEPGNTGAKS
Subjt:  RLERLHRAVKQLRHVRQPGESAAA---------GVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKS

Query:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ
        V ASKGLADYSSDPPNVSA SPG KNDDEHQDIDIDD+FGSV SDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+
Subjt:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ

Query:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        GRE P AA ALRAQV+AEGRDDQ+SSSSSS SGSGSSSGSSSGSSDSEGSDEDSVTSI
Subjt:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

5.1e-140

81.13

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEP+TAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVT------PAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAA
        RLERLHRAV QLRH+RQPGESAAA  +  T      PAAA TTASV HSLT PEPRLSPPV KV+KPMHMGRSSFP +PVEVERIDIGEPGN GAK+V A
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVT------PAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAA

Query:  SKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGRE
        SKGL +YSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVSSDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAE            
Subjt:  SKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGRE

Query:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
              ALRAQVNAEGR +Q+SSSSSS SGSGSSSGSSS SSDSE SDEDSVTSI
Subjt:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

1.8e-140

79.61

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Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEP+TAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSA---------VTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKS
        RLERLHRAV QLRH+RQPGESAAA  +A           PAA  ++ASV HSLT PEPRLSPPV KVAKPMHMGRSSFP +PVEVERIDIGEPGN GAK 
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSA---------VTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKS

Query:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ
        V ASKGL DYSSDPPN S  SPG KNDDEHQDIDIDDIFGSVSSDDGNN EEE+++ GFDIN+PHQNDTDDEIADVDDSGDEAEKGPNAAE         
Subjt:  VAASKGLADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQ

Query:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
                 ALRAQVNAEGR +Q+SSSSSS SGSGSSSGSSS SSDSEGSDEDSVTSI
Subjt:  GREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1DE82 ELL-associated factor 1

7.1e-142

82.91

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MAN+NKEEP+TAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAV  LRHVRQ  ES          A  S T SVPHSLTVPEPRLSPPVAKV KPMHMGRSSFP VPVEVERIDIGEPGNTGA SVAASK +AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA
        Y+SDPPNVSAPSP P   NDDEHQDIDID+IFGSVSSDDGNNVEEEK+D GFDINVPH NDTDDEIADVDDSGDEA+KGPNAAE                
Subjt:  YSSDPPNVSAPSPGP--KNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNA

Query:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
          ALRAQVNAEGRD QTSSSSSSESGSGSSSGSSSGSSDSE SDEDSVTSI
Subjt:  ADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

3.2e-158

88.83

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AA V+    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR SFP+V VEVE+IDIGEPGNTGAK V ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+DAGFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

1.7e-159

89.4

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEP+TAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAVKQLRH+RQPGES+AAGV+    AA+ST+AS  HSLT PEPRLSPP AKV KPMHMGR SFP+V VEVE+IDIGEPGNTGAKSV ASKG AD
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD
        YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDD NN EE+K+DAGFDINVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNA+GRE P AA 
Subjt:  YSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAAD

Query:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI
        ALRAQVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  ALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGSDEDSVTSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

5.0e-71

52.81

Show/hide

Query:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF
        M+N++++EP TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK + GS+ K K+NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE F
Subjt:  MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD
        RLERLHRAV QLRHVR PGESAAA  SAV          V H L+        PV + AK   + RS  P VPVEVERI+IG+P N+             
Subjt:  RLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLAD

Query:  YSSDPPNVSAPSP-GPKND--DEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAQGRE
          ++  NV A SP   KND  DEHQ+ID+ +IFGS + ++ +N E+E  D G  +   ++  + T++EIADV DDSG E EKG NAAEALRAQVNA+ ++
Subjt:  YSSDPPNVSAPSP-GPKND--DEHQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAQGRE

Query:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGS-DEDSVTSI
        +  ++ +  +  ++    D  S S SS SGSG  S S S S  S GS DED V S+
Subjt:  APNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

2.5e-46

41.5

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Query:  NNNKEEPRTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDG
        +N+ EEP+ AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID TKPG L K+K+N+VT+EFQNNQL KP V F G SEDY  ++ DA+LFFDG
Subjt:  NNNKEEPRTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDG

Query:  ETFRLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKG
        E FRLE+LHR+VK+L+ +R P ESA+A    VT                   ++ PPV K               PV++  IDI  P             
Subjt:  ETFRLERLHRAVKQLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKG

Query:  LADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAG---FDINVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGR
                             D  +D++I+D       ++   +  ++   G    DIN+PH  +  DDEIA VD + DE+ KG NAAEALRAQVNA+ R
Subjt:  LADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDGNNVEEEKLDAG---FDINVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGR

Query:  EAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEG
        E     ++ ++  +  GR+ ++S S    SGSGSSS S S  S SEG
Subjt:  EAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSEG

Sequences

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CDS sequence

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ATGGCGAACAACAACAAAGAAGAGCCGAGGACCGCGCCCCAGCCCGATCGGTGGTATAATCTCTCTCTTGGTCCTTCCTTCAAGGATGAATCCTCCAACAAATTCTGCAC
TCTTCGATATGAATTTAAACCGGCGTCGATCGATAAAACGAAGCCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTGGGGA
AACCCAATGTGGCGTTTGTTGGCAGTAGTGAGGATTATAAGGAAAACGATGCCGTTTTGTTTTTTGACGGCGAGACTTTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAG
CAGCTTCGGCACGTTCGACAGCCGGGCGAATCCGCTGCTGCTGGCGTTTCCGCCGTCACCCCCGCCGCCGCGTCCACCACCGCTTCTGTCCCTCATTCTTTGACGGTGCC
GGAGCCTCGGTTATCTCCTCCAGTGGCTAAAGTTGCCAAACCTATGCATATGGGTCGAAGCAGTTTTCCGGCAGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGC
CAGGAAATACAGGTGCAAAATCTGTTGCTGCTAGTAAAGGGCTTGCTGATTACTCATCAGACCCACCAAATGTGTCTGCTCCCTCTCCGGGCCCGAAGAATGATGATGAG
CATCAAGACATAGATATTGATGATATTTTTGGGTCTGTTTCATCTGATGATGGAAATAATGTCGAAGAAGAAAAACTTGACGCTGGATTCGATATAAATGTACCACATCA
GAACGATACCGATGATGAGATTGCTGATGTGGATGATAGTGGGGACGAAGCTGAGAAGGGACCTAATGCTGCTGAAGCCCTCAGAGCTCAGGTTAATGCACAGGGCAGGG
AGGCACCTAATGCTGCAGATGCCCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGACGACCAGACTTCAAGTTCTAGCAGCAGCGAATCGGGCAGTGGCAGCAGCAGCGGA
AGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGCGATGAGGATTCAGTTACGTCGATCTGA

mRNA sequence

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Protein sequence

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MANNNKEEPRTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVK
QLRHVRQPGESAAAGVSAVTPAAASTTASVPHSLTVPEPRLSPPVAKVAKPMHMGRSSFPAVPVEVERIDIGEPGNTGAKSVAASKGLADYSSDPPNVSAPSPGPKNDDE
HQDIDIDDIFGSVSSDDGNNVEEEKLDAGFDINVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAQGREAPNAADALRAQVNAEGRDDQTSSSSSSESGSGSSSG
SSSGSSDSEGSDEDSVTSI

Spg007001 (gene) of Sponge gourd (cylindrica) v1 genome