; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007024 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007024
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold9:48038279..48043488
RNA-Seq ExpressionSpg007024
SyntenySpg007024
Gene Ontology termsGO:0009765 - photosynthesis, light harvesting (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19913.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]1.6e-9597.73Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]1.6e-9596.09Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFH N LSLLNSS S+
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]1.6e-9597.73Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

XP_022936160.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]1.2e-9597.16Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

XP_023521109.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-9597.16Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

TrEMBL top hitse value%identityAlignment
A0A0A0L0U5 Chlorophyll a-b binding protein, chloroplastic7.6e-9696.09Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFH N LSLLNSS S+
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK

A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic7.6e-9697.73Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

A0A5D3D8P8 Chlorophyll a-b binding protein, chloroplastic7.6e-9697.73Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic5.8e-9697.16Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic1.7e-9596.59Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS
        INYPGGVLFDPLNLS+DAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS

SwissProt top hitse value%identityAlignment
P12469 Chlorophyll a-b binding protein C, chloroplastic6.7e-3347.59Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG P   L  +Q ++ I  CQ +LM   E  R  G    EPLG  +  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN
        YPGG  FDPL L++D  AF ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H++DP + N
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN

P12470 Chlorophyll a-b binding protein E, chloroplastic1.8e-3347.34Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG P   L  +Q ++ I  CQ +LM   E  R  G    EPLG  +  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS
        YPGG  FDPL L++D  AF ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H++DP + N  S
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic5.2e-3343.37Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H RWAML +LG + PE+L  +    F EP+W++ G        LDYLG P  +L  +Q ++ +   Q +LM   E  R  G++ +        G+  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN
        YPGG  FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H+ DP   N
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic1.8e-8681.71Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS
        INYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP H N++++L +
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS

Q9XF87 Chlorophyll a-b binding protein 2.4, chloroplastic3.0e-3348.8Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN
        YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP   N
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein1.3e-8781.71Show/hide
Query:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD
        NFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGD
Subjt:  NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGD

Query:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS
        INYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP H N++++L +
Subjt:  INYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS

AT2G05070.1 photosystem II light harvesting complex gene 2.23.1e-3347.34Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS
        YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP   N  S
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS

AT2G05100.1 photosystem II light harvesting complex gene 2.13.1e-3347.34Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS
        YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP   N  S
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS

AT3G27690.1 photosystem II light harvesting complex gene 2.32.1e-3448.8Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN
        YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP   N
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN

AT5G54270.1 light-harvesting chlorophyll B-binding protein 31.4e-3343.37Show/hide
Query:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN
        E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  
Subjt:  EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDIN

Query:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN
        YPGG  FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NLL+H+ +P   N
Subjt:  YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCAT
CTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCC
AAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTG
TTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCA
AGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAATTCAAAGGAATTAA
GAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAG
CCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGA
CAATAAGAACCAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCAT
CTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCC
AAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTG
TTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCA
AGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAATTCAAAGGAATTAA
GAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAG
CCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGA
CAATAAGAACCAGTTGTGA
Protein sequenceShow/hide protein sequence
MLNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVL
FDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSKELRNRRHRPQCIIEGAGEPDVSLVKLLSQLAYTDWIQPE
PIGMGPRSACEATHASTWSSASSSCLFYSTIDPVRLDNKNQL