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Spg007032 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007032
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationscaffold9:47806478..47811425
RNA-Seq ExpressionSpg007032
SyntenySpg007032
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]4.1e-0547.95Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVP----PPRIDNDREDDYEDDGSDQPDDDQVTLVAVPR
        +REAQQG + RMI  +E L++R+ R E + + RER+P    PP + N  ++  E DGSD  DDDQVTL+  PR
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVP----PPRIDNDREDDYEDDGSDQPDDDQVTLVAVPR

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.8e-0858.57Show/hide
Query:  REAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVAVPRG
        REA +GT+ERMIR +E L+ER+GRLE Q Q   RVPPP       ED+YE DGSD  +DDQ T++A PRG
Subjt:  REAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVAVPRG

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]7.0e-0550Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD-QVTLVAVPRGRQRQS
        +REAQQ TMER+IRGIEEL++R+GRLE Q Q R+R+P P       D YE D SD  +D+ QV  +   R R  ++
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD-QVTLVAVPRGRQRQS

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]1.6e-0456.67Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD
        +REAQQ TMER+IRGIEEL++R+GRLE Q Q R+R+P P       D YE D SD  +D+
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.6e-0456.67Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD
        +REAQQ TMER+IRGIEEL++R+GRLE Q Q R+R+P P       D YE D SD  +D+
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein2.0e-0547.95Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVP----PPRIDNDREDDYEDDGSDQPDDDQVTLVAVPR
        +REAQQG + RMI  +E L++R+ R E + + RER+P    PP + N  ++  E DGSD  DDDQVTL+  PR
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVP----PPRIDNDREDDYEDDGSDQPDDDQVTLVAVPR

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241158.6e-0958.57Show/hide
Query:  REAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVAVPRG
        REA +GT+ERMIR +E L+ER+GRLE Q Q   RVPPP       ED+YE DGSD  +DDQ T++A PRG
Subjt:  REAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVAVPRG

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699483.4e-0550Show/hide
Query:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD-QVTLVAVPRGRQRQS
        +REAQQ TMER+IRGIEEL++R+GRLE Q Q R+R+P P       D YE D SD  +D+ QV  +   R R  ++
Subjt:  MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDD-QVTLVAVPRGRQRQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGGCACAACAAGGAACCATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCC
ACCACCACGTATTGACAATGATCGAGAGGATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGGTTCCAAGAGGAAGACAAAGAC
AATCATTCAAGCTTGACTTGATCAATCATGCTTGTGGAGTGATTCGAATCTCAAGCAAGTTTCTTGCCTTGAGATATTTGATCGACAAGCTTGACTTGATCAATCATGCT
TGTGGAGTGATTCGAATCTCAAGCAAGTTTCTTGCCTTGAGATATTTGATCGACAAGGTCATCCATGGCGCTCAAATTGCTTTCCTAGCGCCAAAATTCACCGATTCCCT
TTTCAAAATTTGCGTCATTGCCGTGATGAGCCTTTTCACCGGTGCTTTTGATCTCCGTTCACTTTACTGTCCGATCATGACGATCATCGAACGGATAAACTTGATACCAT
CAGAACAGGCAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGGCACAACAAGGAACCATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCC
ACCACCACGTATTGACAATGATCGAGAGGATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGGTTCCAAGAGGAAGACAAAGAC
AATCATTCAAGCTTGACTTGATCAATCATGCTTGTGGAGTGATTCGAATCTCAAGCAAGTTTCTTGCCTTGAGATATTTGATCGACAAGCTTGACTTGATCAATCATGCT
TGTGGAGTGATTCGAATCTCAAGCAAGTTTCTTGCCTTGAGATATTTGATCGACAAGGTCATCCATGGCGCTCAAATTGCTTTCCTAGCGCCAAAATTCACCGATTCCCT
TTTCAAAATTTGCGTCATTGCCGTGATGAGCCTTTTCACCGGTGCTTTTGATCTCCGTTCACTTTACTGTCCGATCATGACGATCATCGAACGGATAAACTTGATACCAT
CAGAACAGGCAGCATGA
Protein sequenceShow/hide protein sequence
MREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDDQVTLVAVPRGRQRQSFKLDLINHACGVIRISSKFLALRYLIDKLDLINHA
CGVIRISSKFLALRYLIDKVIHGAQIAFLAPKFTDSLFKICVIAVMSLFTGAFDLRSLYCPIMTIIERINLIPSEQAA