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Spg007057 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007057
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionexocyst complex component sec3A
Genome locationscaffold9:46366785..46367497
RNA-Seq ExpressionSpg007057
SyntenySpg007057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47550.1 exocyst complex component sec3A2.0e-0442.47Show/hide
Query:  LSLLTCNATLYVVGKNSVELAALNESRQDLLDGIQS----------------C---------YISGQKADAAG
        L ++  + T    GKNS +L ALNES QDLLDGIQ                 C         Y+SGQKADAAG
Subjt:  LSLLTCNATLYVVGKNSVELAALNESRQDLLDGIQS----------------C---------YISGQKADAAG
AT1G47550.2 exocyst complex component sec3A2.0e-0442.47Show/hide
Query:  LSLLTCNATLYVVGKNSVELAALNESRQDLLDGIQS----------------C---------YISGQKADAAG
        L ++  + T    GKNS +L ALNES QDLLDGIQ                 C         Y+SGQKADAAG
Subjt:  LSLLTCNATLYVVGKNSVELAALNESRQDLLDGIQS----------------C---------YISGQKADAAG
AT1G47560.1 exocyst complex component sec3B1.1e-0446.67Show/hide
Query:  GKNSVELAALNESRQDLLDGIQ-------------------------SCYISGQKADAAG
        GKNS +L ALNES QDLLDGIQ                           Y+SGQKADAAG
Subjt:  GKNSVELAALNESRQDLLDGIQ-------------------------SCYISGQKADAAG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCACGTGGTTTCACTATCATCAGTTTTGAGTCTTCTGACATGCAATGCAACATTGTATGTTGTGGGGAAAAATTCTGTCGAGCTTGCAGCATTAAATGAATCACG
TCAGGACTTGCTTGATGGAATTCAGAGCTGCTATATTTCTGGACAGAAAGCTGATGCAGCAGGATTGTCCGTCTTTTGCTTGGTGACTTGGAGTCAAGAATATCCATGCA
GTTTAATC
mRNA sequenceShow/hide mRNA sequence
ATGGTCCACGTGGTTTCACTATCATCAGTTTTGAGTCTTCTGACATGCAATGCAACATTGTATGTTGTGGGGAAAAATTCTGTCGAGCTTGCAGCATTAAATGAATCACG
TCAGGACTTGCTTGATGGAATTCAGAGCTGCTATATTTCTGGACAGAAAGCTGATGCAGCAGGATTGTCCGTCTTTTGCTTGGTGACTTGGAGTCAAGAATATCCATGCA
GTTTAATC
Protein sequenceShow/hide protein sequence
MVHVVSLSSVLSLLTCNATLYVVGKNSVELAALNESRQDLLDGIQSCYISGQKADAAGLSVFCLVTWSQEYPCSLI