| GenBank top hits | e value | %identity | Alignment |
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| KAG6591223.1 Small nuclear ribonucleoprotein SmD3b, partial [Cucurbita argyrosperma subsp. sororia] | 7.1e-64 | 94.89 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAARSMTLIE
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR +E
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAARSMTLIE
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| XP_022151728.1 small nuclear ribonucleoprotein SmD3b-like [Momordica charantia] | 1.6e-63 | 98.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRGSATGRGA+P+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| XP_022937091.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita moschata] | 2.1e-63 | 98.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| XP_022940723.1 small nuclear ribonucleoprotein SmD3b-like isoform X1 [Cucurbita moschata] | 4.6e-63 | 97.71 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| XP_023522400.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita pepo subsp. pepo] | 6.0e-63 | 97.71 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRG VP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A6J1DDX8 Small nuclear ribonucleoprotein Sm D3 | 7.7e-64 | 98.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRGSATGRGA+P+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| A0A6J1F9D0 Small nuclear ribonucleoprotein Sm D3 | 1.0e-63 | 98.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| A0A6J1FQ35 Small nuclear ribonucleoprotein Sm D3 | 2.2e-63 | 97.71 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| A0A6J1IBE9 Small nuclear ribonucleoprotein Sm D3 | 1.0e-63 | 98.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| A0A6J1IVB4 Small nuclear ribonucleoprotein Sm D3 | 2.2e-63 | 97.71 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGRAVAMRAKAQAAGRG ATGRGAVP+AR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62318 Small nuclear ribonucleoprotein Sm D3 | 4.7e-34 | 54.84 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAV
G+A ++A+ A GRG GRG +
Subjt: GRAVAMRAKAQAAGRGSATGRGAV
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| P62320 Small nuclear ribonucleoprotein Sm D3 | 4.7e-34 | 54.84 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAV
G+A ++A+ A GRG GRG +
Subjt: GRAVAMRAKAQAAGRGSATGRGAV
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| P62323 Small nuclear ribonucleoprotein Sm D3 | 4.7e-34 | 54.84 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAV
G+A ++A+ A GRG GRG +
Subjt: GRAVAMRAKAQAAGRGSATGRGAV
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| Q9LM92 Small nuclear ribonucleoprotein SmD3b | 4.1e-54 | 85.61 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPAAR
VGRGR AMR K AAG G T GRGAVP R
Subjt: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPAAR
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| Q9S7E6 Small nuclear ribonucleoprotein SmD3a | 2.6e-53 | 83.21 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGR AMRAK GRG+ GRGAVP R
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 2.9e-55 | 85.61 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPAAR
VGRGR AMR K AAG G T GRGAVP R
Subjt: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPAAR
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| AT1G76300.1 snRNP core protein SMD3 | 1.9e-54 | 83.21 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
VGRGR AMRAK GRG+ GRGAVP R
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPAAR
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 4.5e-08 | 28.93 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSATGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSATGRG
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 4.5e-08 | 28.93 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSATGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSATGRG
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 9.8e-11 | 32.77 | Show/hide |
Query: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ ++++ +PD + + ++ R K +G GRGR
Subjt: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
Query: AVAMRAKAQAAGRGSATGR
V A+ GRG++ G+
Subjt: AVAMRAKAQAAGRGSATGR
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