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Spg007141 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007141
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLYR motif-containing protein 2
Genome locationscaffold9:47308818..47309841
RNA-Seq ExpressionSpg007141
SyntenySpg007141
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608613.1 hypothetical protein SDJN03_01955, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3292.86Show/hide
Query:  GRELAMVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQ
        G E AMVLSLDLQEFILRARVLKLYR ALRTAQKAPVHAREELRHTIRQEMENNRGCN+R+KVRFLLSEGIERLKRL+EMLDMQ
Subjt:  GRELAMVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQ

XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]1.1e-3193.83Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALRT +KAPVHAREELRHTIRQEMENNRGC+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

XP_022941069.1 uncharacterized protein LOC111446466 [Cucurbita moschata]1.3e-3296.3Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALRTAQKAPVHAREELRHTIRQEMENNRGCN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

XP_023524988.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]1.3e-3296.3Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL LDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]5.7e-3192.59Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALRT +KAPVHAREELRHTIRQEMENNR C+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112181.2e-2987.65Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MV+SLDL EFILRARVLKL+RQALRTA+KAPVHAREELRHTIRQEMENNR CND+QKVR+L+SEGIE LKRLDEMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

A0A6J1F8N3 uncharacterized protein LOC1114433215.5e-3293.83Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALRT +KAPVHAREELRHTIRQEMENNRGC+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

A0A6J1FM54 uncharacterized protein LOC1114464666.5e-3396.3Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALRTAQKAPVHAREELRHTIRQEMENNRGCN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

A0A6J1IFA5 uncharacterized protein LOC1114764182.3e-3090.12Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALRT +KAPVHAREELRHTIRQEMENNR C+DRQK+RFLLSEG ERLKRLDEMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

A0A6J1IY12 uncharacterized protein LOC1114809626.1e-3193.83Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLSLDLQEFILRARVLKLYRQALR AQKAPVHAREELR  IRQEMENNRGCN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein9.0e-2771.25Show/hide
Query:  VLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        ++ LDLQ FILRARVLKLYRQAL+ A +APVH R EL+ T+RQEME NR CND+QK+R+L+SEG+ER+K LDEMLDMQG+
Subjt:  VLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCCGCCGGAAGTTGTTTTGTACAGTCGAATTCTTTCGCTATATCTAACGATGTAAAAGGCTGTCCAGGAAGAGAACTCGCCATGGTTCTCTCCCTTGATTTACA
GGAATTTATTCTCCGTGCAAGGGTGTTGAAACTGTACAGGCAGGCTTTAAGAACTGCTCAAAAAGCTCCTGTTCACGCTCGAGAGGAACTGAGGCATACAATCAGACAAG
AAATGGAAAACAACCGCGGCTGCAACGATAGACAGAAAGTTAGATTTCTGCTCAGCGAAGGAATAGAGAGATTGAAGCGTTTAGATGAGATGTTGGATATGCAGGGTAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCCGCCGGAAGTTGTTTTGTACAGTCGAATTCTTTCGCTATATCTAACGATGTAAAAGGCTGTCCAGGAAGAGAACTCGCCATGGTTCTCTCCCTTGATTTACA
GGAATTTATTCTCCGTGCAAGGGTGTTGAAACTGTACAGGCAGGCTTTAAGAACTGCTCAAAAAGCTCCTGTTCACGCTCGAGAGGAACTGAGGCATACAATCAGACAAG
AAATGGAAAACAACCGCGGCTGCAACGATAGACAGAAAGTTAGATTTCTGCTCAGCGAAGGAATAGAGAGATTGAAGCGTTTAGATGAGATGTTGGATATGCAGGGTAAT
TAA
Protein sequenceShow/hide protein sequence
MFAAGSCFVQSNSFAISNDVKGCPGRELAMVLSLDLQEFILRARVLKLYRQALRTAQKAPVHAREELRHTIRQEMENNRGCNDRQKVRFLLSEGIERLKRLDEMLDMQGN