; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007161 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007161
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationscaffold9:46934633..46935196
RNA-Seq ExpressionSpg007161
SyntenySpg007161
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6583.52Show/hide
Query:  WV-LVVFAVVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW---GGGGGGGGGGGGGGGGGWGWGGGGGG
        WV LV F V +YG RAEGL NG      TFLTFSELPRG+AGEGRN+SGNTTTVEVSKQN GGGGGYGWGW   GGGGGGGGGGGGGGGGGWGWGGGGGG
Subjt:  WV-LVVFAVVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW---GGGGGGGGGGGGGGGGGWGWGGGGGG

Query:  WWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        WWKWGCGGQPKS     GRRGGG RKNV+RKRIY+E DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
Subjt:  WWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-6480.87Show/hide
Query:  VVFAVVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--------GGGGGGGGGGGGGGGGGWGWGGGGG
        + F V +YG RAEGL NG      TFLTFSELPRG+AGEGRN+SGNTTTVEVSKQN GGGGGYGWGW        GGGGGGGGGGGGGGGGGWGWGGGGG
Subjt:  VVFAVVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--------GGGGGGGGGGGGGGGGGWGWGGGGG

Query:  GWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GWWKWGCGGQPKS     GRRGGG RKNV+RKRIY+E DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
Subjt:  GWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]5.4e-6677.55Show/hide
Query:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN---GGGGGYGWGW-----GGGGGGGGGGGGG
        MGWEN +    LV+ A VIYG R AEGLGNG+MP NVTFLTFSELP+ +AGE RN+S NT+TVEVSKQN   GGGGGYGWGW     GGGGGGGGGGGGG
Subjt:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN---GGGGGYGWGW-----GGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGG-RKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGGGWGWGGGGGGWWKWGCGG+PK    K GRR   G RKNV RK++Y+E+DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGG-RKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]2.7e-6579.17Show/hide
Query:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN--GGGGGYGWGW--GGGGGGGGGGGGGGGGG
        MGWEN +    LV+ A VI G R AEGLGNG+MP NVTFLTFSELP+ +AGE RN+S N+TTVEVSKQN  GGGGGYGWGW  GGGGGGGGGGGGGGGGG
Subjt:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN--GGGGGYGWGW--GGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSGRSKFGRR-GGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        WGWGGGGGGWWKWGCGGQPKS R   GRR   GG +NV  KR+Y E+DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  WGWGGGGGGWWKWGCGGQPKSGRSKFGRR-GGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]2.8e-6282.76Show/hide
Query:  VVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ
        + +YG RAEGL NG      TFLTFSELP G+AGEGRN+SGNTTTVEVSKQN GGGGGYGWGW  GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ
Subjt:  VVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ

Query:  PKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRL
        PKS     GRRGGG RKNV+RKRIY+E DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHCRRL
Subjt:  PKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRL

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein1.3e-6579.17Show/hide
Query:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN--GGGGGYGWGW--GGGGGGGGGGGGGGGGG
        MGWEN +    LV+ A VI G R AEGLGNG+MP NVTFLTFSELP+ +AGE RN+S N+TTVEVSKQN  GGGGGYGWGW  GGGGGGGGGGGGGGGGG
Subjt:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN--GGGGGYGWGW--GGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSGRSKFGRR-GGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        WGWGGGGGGWWKWGCGGQPKS R   GRR   GG +NV  KR+Y E+DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  WGWGGGGGGWWKWGCGGQPKSGRSKFGRR-GGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

A0A1S3C029 keratin, type II cytoskeletal 12.6e-6677.55Show/hide
Query:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN---GGGGGYGWGW-----GGGGGGGGGGGGG
        MGWEN +    LV+ A VIYG R AEGLGNG+MP NVTFLTFSELP+ +AGE RN+S NT+TVEVSKQN   GGGGGYGWGW     GGGGGGGGGGGGG
Subjt:  MGWENRMNFWVLVVFAVVIYGER-AEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN---GGGGGYGWGW-----GGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGG-RKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGGGWGWGGGGGGWWKWGCGG+PK    K GRR   G RKNV RK++Y+E+DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGG-RKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

A0A2N9IZ96 Uncharacterized protein2.6e-3451.23Show/hide
Query:  WVLVVFAVVIYGERAEGLGNGT--MPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN----------------GGGGGYGWGW--------GGGGG
        WV++  A  I G + + +GNGT    +N T L   +  +G+   G  N  N+T V +  +N                GGGG Y WGW        GGGGG
Subjt:  WVLVVFAVVIYGERAEGLGNGT--MPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN----------------GGGGGYGWGW--------GGGGG

Query:  GGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAH
        GGGGGGGGGGGGWGWGGGG G + WGCGGQPK G+ K     G    + +R R++++ DY++GEFAQCMV+ RCRGMRLDCPLHCGGPCFYDC++MCKAH
Subjt:  GGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAH

Query:  CRR
        CRR
Subjt:  CRR

A0A5B6X6H1 RNA-binding protein cabeza-like3.8e-3351.4Show/hide
Query:  FWVLVVF-AVVIYGERAEGLGNGTMP-----TNVTFLTFS-ELPRGSAGEGRNNSGNTTTVEVSKQN---------------------------GGGGGY
        +WV+V+F AV +   R + L NGT       TN +  +   +LP G      +N  +T  V  + +N                           GGGGGY
Subjt:  FWVLVVF-AVVIYGERAEGLGNGTMP-----TNVTFLTFS-ELPRGSAGEGRNNSGNTTTVEVSKQN---------------------------GGGGGY

Query:  GWGWGGGGGGGGGGGGGGGGGWGW-GGGGGGWWKWGCGGQPKSGRSKFGR-RGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC
        GWGWGGGGGGGGGGGGGGGGGWGW GGGGGGW+KWGCGG+     +  GR +G  GR   +RKR +++ DY+MGEFAQC V+GRCRGMRLDCPLHCGGPC
Subjt:  GWGWGGGGGGGGGGGGGGGGGWGW-GGGGGGWWKWGCGGQPKSGRSKFGR-RGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC

Query:  FYDCRYMCKAHCRR
         YDC++MCKAHCRR
Subjt:  FYDCRYMCKAHCRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like1.3e-6282.76Show/hide
Query:  VVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ
        + +YG RAEGL NG      TFLTFSELP G+AGEGRN+SGNTTTVEVSKQN GGGGGYGWGW  GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ
Subjt:  VVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQN-GGGGGYGWGW--GGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQ

Query:  PKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRL
        PKS     GRRGGG RKNV+RKRIY+E DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHCRRL
Subjt:  PKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein1.1e-1952Show/hide
Query:  EGRNNSGNTTTVEV------SKQNGGGGGYGWGW------GGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKR
        +  NN  N+TT  V         NGG G Y WGW      GGGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG    G+ K GR G G         
Subjt:  EGRNNSGNTTTVEV------SKQNGGGGGYGWGW------GGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSGRSKFGRRGGGGRKNVNRKR

Query:  IYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
             ++   E+A+C  +G+C G RL+CP HCGG CFYDC ++CK HCRR
Subjt:  IYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGAGAATCGAATGAATTTCTGGGTTCTGGTGGTTTTTGCTGTTGTGATTTATGGGGAAAGAGCTGAGGGTTTGGGAAATGGCACTATGCCCACGAATGTCAC
TTTCTTAACATTCTCAGAGCTGCCACGGGGAAGTGCAGGGGAAGGGAGAAACAATTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAATGGGGGAGGCGGTGGAT
ATGGGTGGGGATGGGGCGGAGGCGGAGGTGGCGGCGGTGGAGGAGGAGGCGGTGGCGGTGGTGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGT
GGAGGACAGCCGAAATCTGGCAGAAGCAAATTCGGACGGCGCGGCGGCGGCGGGAGGAAAAATGTGAACAGGAAGAGAATCTACGATGAGAGGGATTATAGAATGGGAGA
ATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGATACATGTGCAAGGCTCACT
GCCGACGTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGAGAATCGAATGAATTTCTGGGTTCTGGTGGTTTTTGCTGTTGTGATTTATGGGGAAAGAGCTGAGGGTTTGGGAAATGGCACTATGCCCACGAATGTCAC
TTTCTTAACATTCTCAGAGCTGCCACGGGGAAGTGCAGGGGAAGGGAGAAACAATTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAATGGGGGAGGCGGTGGAT
ATGGGTGGGGATGGGGCGGAGGCGGAGGTGGCGGCGGTGGAGGAGGAGGCGGTGGCGGTGGTGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGT
GGAGGACAGCCGAAATCTGGCAGAAGCAAATTCGGACGGCGCGGCGGCGGCGGGAGGAAAAATGTGAACAGGAAGAGAATCTACGATGAGAGGGATTATAGAATGGGAGA
ATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGATACATGTGCAAGGCTCACT
GCCGACGTCTCTGA
Protein sequenceShow/hide protein sequence
MGWENRMNFWVLVVFAVVIYGERAEGLGNGTMPTNVTFLTFSELPRGSAGEGRNNSGNTTTVEVSKQNGGGGGYGWGWGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGC
GGQPKSGRSKFGRRGGGGRKNVNRKRIYDERDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRL