; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007210 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007210
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein TOPLESS
Genome locationscaffold9:47674660..47685491
RNA-Seq ExpressionSpg007210
SyntenySpg007210
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048731 - system development (biological process)
InterPro domainsIPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER44102.1 transducin family protein / WD-40 repeat family protein [Striga asiatica]2.6e-1741.58Show/hide
Query:  VNLPINVQPVSFVDHGH---------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIGVNLPINVQPVSF
        VNLP+NV PVSF  H H         DLPKTV RT NQGSSPM MDFHP+QQTLLLV   +   +GL  +G+     L +  V       LP+       
Subjt:  VNLPINVQPVSFVDHGH---------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIGVNLPINVQPVSF

Query:  VDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGISMLIYTNSGSAILALASNAFHLLWK
         D G  + + V+ +P+     +    H VQ                     SY  +  +   + IS LIYTNSGSAILALASNA HLLWK
Subjt:  VDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGISMLIYTNSGSAILALASNAFHLLWK

XP_019091004.1 PREDICTED: protein TOPLESS [Camelina sativa]7.2e-2035.15Show/hide
Query:  SEKVNLPINVQPVSFVDHGH-----------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIG------V
        +++VNL +N+ P+SF   GH           DLPKTV RT +QGSSPM MDFHP++QTLLL         G   LGA      T  PV TP+        
Subjt:  SEKVNLPINVQPVSFVDHGH-----------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIG------V

Query:  NLPINVQPVSFVDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVT-PIG----VNLPINVQPVSFVDHGH---
        ++P        +  G       ++ P    +   +D+                             H+   T P+G    VNL +N+ P+SF   GH   
Subjt:  NLPINVQPVSFVDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVT-PIG----VNLPINVQPVSFVDHGH---

Query:  --------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
                DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  --------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

XP_022153396.1 protein TOPLESS [Momordica charantia]2.5e-1271.19Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTV+RT NQGSSPM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

XP_031739792.1 protein TOPLESS [Cucumis sativus]2.5e-1269.49Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTVMRT NQGS+PM MDFHP+QQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

XP_038896551.1 protein TOPLESS [Benincasa hispida]1.9e-1271.19Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTVMRT NQGS+PM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

TrEMBL top hitse value%identityAlignment
A0A0A0KTH7 Uncharacterized protein1.2e-1269.49Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTVMRT NQGS+PM MDFHP+QQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

A0A0A0KTH7 Uncharacterized protein9.5e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A0A0KTH7 Uncharacterized protein1.2e-1271.19Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTV+RT NQGSSPM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

A0A5A7QGS6 Transducin family protein / WD-40 repeat family protein1.2e-1741.58Show/hide
Query:  VNLPINVQPVSFVDHGH---------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIGVNLPINVQPVSF
        VNLP+NV PVSF  H H         DLPKTV RT NQGSSPM MDFHP+QQTLLLV   +   +GL  +G+     L +  V       LP+       
Subjt:  VNLPINVQPVSFVDHGH---------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGAS---YLTHIPVVTPIGVNLPINVQPVSF

Query:  VDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGISMLIYTNSGSAILALASNAFHLLWK
         D G  + + V+ +P+     +    H VQ                     SY  +  +   + IS LIYTNSGSAILALASNA HLLWK
Subjt:  VDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGISMLIYTNSGSAILALASNAFHLLWK

A0A6J1DKI7 protein TOPLESS9.5e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1DKI7 protein TOPLESS1.6e-1271.19Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

A0A6J1KEV5 protein TOPLESS-like9.5e-0292.31Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSGSAILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

A0A6J1KEV5 protein TOPLESS-like1.6e-1271.19Show/hide
Query:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNLP+NV PVSF  HGH        DLPKTV+RT NQGSSPM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 21.5e-0470.97Show/hide
Query:  DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        DLPK V+R  NQGS+ M +DFHPVQQT+LLV
Subjt:  DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

Q0WV90 Topless-related protein 12.0e-0955.74Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++V+L +N+ P++F    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

Q0WV90 Topless-related protein 11.7e-0384.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Q10NY2 Protein TPR35.9e-0960Show/hide
Query:  SEKVNLPINVQPVSF-VDHGH---DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        SE+VNLP+N+ PV++   H +   D  K V RT +QGS+PM MDFHPVQQTLLLV
Subjt:  SEKVNLPINVQPVSF-VDHGH---DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

Q10NY2 Protein TPR31.7e-0388.46Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LIYTNSG AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Q27GK7 Topless-related protein 49.5e-0752.73Show/hide
Query:  NLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        NLP+NV PV++    H        DLPK V R  +QGS+   MDFHPVQQT+LLV
Subjt:  NLPINVQPVSFVDHGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

Q27GK7 Topless-related protein 44.1e-0268.97Show/hide
Query:  PIGISMLIYTNSGSAILALASNAFHLLWK
        P  +  LIYTNSG AILALA NA H LWK
Subjt:  PIGISMLIYTNSGSAILALASNAFHLLWK

Q94AI7 Protein TOPLESS2.4e-1059.02Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNL +N+ P+SF    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

Q94AI7 Protein TOPLESS1.7e-0384.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein1.7e-1159.02Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNL +N+ P+SF    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

AT1G15750.1 Transducin family protein / WD-40 repeat family protein1.2e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.2 Transducin family protein / WD-40 repeat family protein1.7e-1159.02Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNL +N+ P+SF    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

AT1G15750.2 Transducin family protein / WD-40 repeat family protein1.2e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.3 Transducin family protein / WD-40 repeat family protein1.7e-1159.02Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNL +N+ P+SF    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

AT1G15750.3 Transducin family protein / WD-40 repeat family protein1.2e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G15750.4 Transducin family protein / WD-40 repeat family protein1.7e-1159.02Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++VNL +N+ P+SF    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

AT1G15750.4 Transducin family protein / WD-40 repeat family protein1.2e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK

AT1G80490.1 TOPLESS-related 11.5e-1055.74Show/hide
Query:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV
        S++V+L +N+ P++F    HGH        DLPKTV RT +QGSSPM MDFHP++QTLLLV
Subjt:  SEKVNLPINVQPVSFVD--HGH--------DLPKTVMRTPNQGSSPMCMDFHPVQQTLLLV

AT1G80490.1 TOPLESS-related 11.2e-0484.62Show/hide
Query:  ISMLIYTNSGSAILALASNAFHLLWK
        IS LI+TNSG+AILALASNA HLLWK
Subjt:  ISMLIYTNSGSAILALASNAFHLLWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCGAGTCTCTGGCCTTCCACAGCCACTGTTCGAGCAGAGCCTCAGTCCTTCAGCGATAAATCCACGGCCCGATGCGAAACCAATCTCTTAGAAATTGGTTTGCC
GGATGAGCCTCCAACGCCGGAATGTTGCAGCCGTAGTCACTTAGGAGCGATCCGGCGGAATCTGTTGGAGACAGGCGGTCGCCCGGGCAGTAAGCTGCAAGCCTGCAAGC
AGGACCTTGTAAAGCTGATTGAATTTCCTAATGATGGATGGAGATTGAAGATAGATCATGCTAGTTTTGTTTGTGCTGTTTACTATGGAGAAAAAGTGAATAGGAAAAGT
AAAAAGGAAAAGCTGATTGAAATAACTAGTGATGGAGCTAGTTTTGCTTGTGCTATGTACCAGTATGAGCTACAAAGTGAAAAGGTAAATCTACCGATTAATGTTCAGCC
CGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCAGTCCAACAAACTCTGC
TATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGATTAAT
GTTCAGCCCGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCAGTCCAACA
AACTCTGCTATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTAC
CGATTAATGTTCAGCCCGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCA
GTCCAACAAACTCTGCTATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTAT
ATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCGAGTCTCTGGCCTTCCACAGCCACTGTTCGAGCAGAGCCTCAGTCCTTCAGCGATAAATCCACGGCCCGATGCGAAACCAATCTCTTAGAAATTGGTTTGCC
GGATGAGCCTCCAACGCCGGAATGTTGCAGCCGTAGTCACTTAGGAGCGATCCGGCGGAATCTGTTGGAGACAGGCGGTCGCCCGGGCAGTAAGCTGCAAGCCTGCAAGC
AGGACCTTGTAAAGCTGATTGAATTTCCTAATGATGGATGGAGATTGAAGATAGATCATGCTAGTTTTGTTTGTGCTGTTTACTATGGAGAAAAAGTGAATAGGAAAAGT
AAAAAGGAAAAGCTGATTGAAATAACTAGTGATGGAGCTAGTTTTGCTTGTGCTATGTACCAGTATGAGCTACAAAGTGAAAAGGTAAATCTACCGATTAATGTTCAGCC
CGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCAGTCCAACAAACTCTGC
TATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGATTAAT
GTTCAGCCCGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCAGTCCAACA
AACTCTGCTATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTAC
CGATTAATGTTCAGCCCGTATCATTTGTTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCA
GTCCAACAAACTCTGCTATTGGTTGAGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTAT
ATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG
Protein sequenceShow/hide protein sequence
MEPSLWPSTATVRAEPQSFSDKSTARCETNLLEIGLPDEPPTPECCSRSHLGAIRRNLLETGGRPGSKLQACKQDLVKLIEFPNDGWRLKIDHASFVCAVYYGEKVNRKS
KKEKLIEITSDGASFACAMYQYELQSEKVNLPINVQPVSFVDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGVNLPIN
VQPVSFVDHGHDLPKTVMRTPNQGSSPMCMDFHPVQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGVNLPINVQPVSFVDHGHDLPKTVMRTPNQGSSPMCMDFHP
VQQTLLLVECLSCFRVGLECLGASYLTHIPVVTPIGISMLIYTNSGSAILALASNAFHLLWK