; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007212 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007212
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationscaffold9:47766230..47771925
RNA-Seq ExpressionSpg007212
SyntenySpg007212
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0019538 - protein metabolic process (biological process)
GO:0034645 - cellular macromolecule biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022936063.1 uncharacterized protein LOC111442778 [Cucurbita moschata]6.5e-6683.03Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+K LGSVSPT+LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

XP_022941515.1 uncharacterized protein LOC111446794 [Cucurbita moschata]6.5e-6684.24Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+KR GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIFIGGFVLGGLIVGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRTED PNGVAVNSDEVEPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

XP_023521457.1 uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]8.5e-6683.64Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+KR GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIFIGGFVLGGL+VGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRTED PNGVAVNSDEVEPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

XP_023535792.1 uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo]7.7e-6780.81Show/hide
Query:  QFLVHRRSNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKL
        Q  +  RSNLKTA+K LGSVSPT+LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK LAG DRK+LMRKL
Subjt:  QFLVHRRSNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKL

Query:  PKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        PKFIYDEEKALE                KTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPA+
Subjt:  PKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]1.2e-6786.06Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTANK LGSVSPT+LLL PGWVGK KLST RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISK LAGADRKDLMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938441.2e-6578.33Show/hide
Query:  LFLPGCPRQFLVHRRSNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGAD
        L L   P+  L H  SNLKT +KRLGS+SPT+L+L+PGWVGKAKLST RRPLSVQAAYSDGGRSSNAGIFIGGFVLGG+IVGTLGCVYAPQISK +AGAD
Subjt:  LFLPGCPRQFLVHRRSNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGAD

Query:  RKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        RKDLMRKLPKFIYDEEKALE                KTRKVLAQKIEQLNSAIDEVSAQLR EDPPNGVAVNSDEVE A+
Subjt:  RKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

A0A6J1FC82 uncharacterized protein LOC1114427783.1e-6683.03Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+K LGSVSPT+LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

A0A6J1FTW3 uncharacterized protein LOC1114467943.1e-6684.24Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+KR GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIFIGGFVLGGLIVGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRTED PNGVAVNSDEVEPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

A0A6J1IGB6 uncharacterized protein LOC1114744361.6e-6582.42Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+K LGSVSPT+LLLNPGWVGKAKLST RRPLSVQAAYSD GRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKALE                KTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

A0A6J1IT36 uncharacterized protein LOC1114803667.0e-6683.64Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE
        SNLKTA+KR GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIFIGGFVLGGLIVGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDE
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDE

Query:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL
        EKA+E                KTRKVLAQKIEQLNSAIDEVS+QLRTED PNGVAVNSDEVEPA+
Subjt:  EKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.5.0e-4064.34Show/hide
Query:  RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQ
        +R L++Q+AY D   S + G+F+GGF+LGGLIVG LGCVYAPQISK +AGADRKDLMRKLPKFIYDEEKALE                KTRKVLA+KI Q
Subjt:  RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQ

Query:  LNSAIDEVSAQLRTEDPPNGVAVNSDEVE
        LNSAID+VS+QL++ED PNG A+++DE+E
Subjt:  LNSAIDEVSAQLRTEDPPNGVAVNSDEVE

AT3G02900.1 unknown protein1.4e-1032.73Show/hide
Query:  LSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNS
        LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE                  G+++ R++L +KI QLNS
Subjt:  LSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNS

Query:  AIDEVSAQLR
        AID+VS++L+
Subjt:  AIDEVSAQLR

AT3G02900.2 unknown protein1.4e-1032.73Show/hide
Query:  LSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNS
        LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE                  G+++ R++L +KI QLNS
Subjt:  LSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNS

Query:  AIDEVSAQLR
        AID+VS++L+
Subjt:  AIDEVSAQLR

AT5G16660.1 unknown protein4.7e-1433.75Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTI--------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADR
        S + TA   L  VS ++ +   G     KLS+I               R  SV A Y DG RS ++G FI GF+LGG + G +  ++APQI +++   + 
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTI--------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADR

Query:  KDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLR
        +    K  +  Y +E                 G++KTR+ L +KI QLNSAID VS++LR
Subjt:  KDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLR

AT5G16660.2 unknown protein7.5e-1231.65Show/hide
Query:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTI------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKD
        S + TA   L  VS ++ +   G     KLS+I             R      +  DG RS ++G FI GF+LGG + G +  ++APQI +++   + + 
Subjt:  SNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTI------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKD

Query:  LMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLR
           K  +  Y +E                 G++KTR+ L +KI QLNSAID VS++LR
Subjt:  LMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAGGGCGAACAGGGGCAGCACGACAGAATGGAGGAGGAAGGACTCGGCCTCGAGCCAAGGCCCGGTCCCTTAGACCTTGGCTCGACCTTTTGGCCGATTTCGC
CTCCGGAATCCATTTTCCAATCCTATTTTTACCCGGTTGTCCTCGTCAGTTCCTTGTACATCGGAGATCAAATCTGAAGACTGCCAATAAACGTCTTGGGAGTGTGTCTC
CTACCAACTTGTTACTCAATCCTGGCTGGGTAGGAAAGGCGAAGCTTTCTACAATTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAAGCAAT
GCAGGCATTTTTATTGGAGGTTTTGTACTGGGAGGCCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGACACTTGCTGGGGCAGACCGAAAGGA
TTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTTAAAGGAGTCAAATTGATATGTAGATTTGCTTATCCTGGGATACAGAAAACAAGAA
AAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTGCTCAGCTCCGCACAGAGGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTT
GAACCTGCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAGGGCGAACAGGGGCAGCACGACAGAATGGAGGAGGAAGGACTCGGCCTCGAGCCAAGGCCCGGTCCCTTAGACCTTGGCTCGACCTTTTGGCCGATTTCGC
CTCCGGAATCCATTTTCCAATCCTATTTTTACCCGGTTGTCCTCGTCAGTTCCTTGTACATCGGAGATCAAATCTGAAGACTGCCAATAAACGTCTTGGGAGTGTGTCTC
CTACCAACTTGTTACTCAATCCTGGCTGGGTAGGAAAGGCGAAGCTTTCTACAATTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAAGCAAT
GCAGGCATTTTTATTGGAGGTTTTGTACTGGGAGGCCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGACACTTGCTGGGGCAGACCGAAAGGA
TTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTTAAAGGAGTCAAATTGATATGTAGATTTGCTTATCCTGGGATACAGAAAACAAGAA
AAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTGCTCAGCTCCGCACAGAGGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTT
GAACCTGCCCTTTGA
Protein sequenceShow/hide protein sequence
MELGRTGAARQNGGGRTRPRAKARSLRPWLDLLADFASGIHFPILFLPGCPRQFLVHRRSNLKTANKRLGSVSPTNLLLNPGWVGKAKLSTIRRPLSVQAAYSDGGRSSN
AGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEVKGVKLICRFAYPGIQKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEV
EPAL