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Spg007214 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007214
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA helicase
Genome locationscaffold9:47794998..47797443
RNA-Seq ExpressionSpg007214
SyntenySpg007214
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]1.6e-0977.08Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        MALMRG+PLV KLAV AKYVVLPGAM AAL+YSPPDY   KND K  K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

KAG2698054.1 hypothetical protein I3760_07G133200 [Carya illinoinensis]2.4e-0872.92Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        MA MRG+PLV KLAV AKYVVLPGAM AAL+YSPPDYA     DK  K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1977.14Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLN-KLGPSDHVGLHLQSCIPLMLIM
        MALMRG+PLVRKLAVFAKY VLP AMAAAL+YSPPDY ++ +D   N  + PSDHVGLHLQSCIPLMLIM
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLN-KLGPSDHVGLHLQSCIPLMLIM

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1393.18Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDD
        MALM+G+PLVRKLAVFAKYVVLPGAMAAALVYSPPDYAY+KNDD
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDD

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]1.3e-0972.92Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        MALM+G+PL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++K +K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein6.1e-1072.92Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        MALM+G+PL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++K +K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

A0A2R6PZ99 DNA helicase1.9e-0873.33Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK
        M  MRG+PLV KLAV AKY VLPGAM AAL+YSPPDYAY K  D+
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK

A0A5N6RC88 Uncharacterized protein4.3e-0886.84Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYA
        MALMRG+PLV+KLA+ AKYVVLPGAM AALVYSPPDYA
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYA

A0A6J5TUT5 Uncharacterized protein7.9e-1077.08Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        MALMRG+PLV KLAV AKYVVLPGAM AAL+YSPPDY   KND K  K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

A0A7N2M7F2 Uncharacterized protein3.3e-0870.83Show/hide
Query:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK
        M  MRG+PLV KLAV AKYVVLPGAMAAA++YSPP YA Y N  K  K
Subjt:  MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGATGAGAGGAAAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTACGTTGTTCTTCCGGGAGCCATGGCTGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGCTTACTACAAGAATGACGATAAACTGAATAAACTAGGACCATCTGATCATGTAGGCTTGCATTTGCAGAGTTGTATTCCTCTTATGTTGATAATGGTAAAGAAGGGGA
GTAGTTTATCTAACTCTTGCGACTCTCCAGCAGTGCACTGTATTTTAGAATCCAAGCTTGATTTTGATGGCCCCATGCCGTACTCGTTTTATTTTGTCATTACTCCTGCT
GCGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGATGAGAGGAAAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTACGTTGTTCTTCCGGGAGCCATGGCTGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGCTTACTACAAGAATGACGATAAACTGAATAAACTAGGACCATCTGATCATGTAGGCTTGCATTTGCAGAGTTGTATTCCTCTTATGTTGATAATGGTAAAGAAGGGGA
GTAGTTTATCTAACTCTTGCGACTCTCCAGCAGTGCACTGTATTTTAGAATCCAAGCTTGATTTTGATGGCCCCATGCCGTACTCGTTTTATTTTGTCATTACTCCTGCT
GCGGAGTAG
Protein sequenceShow/hide protein sequence
MALMRGKPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKLNKLGPSDHVGLHLQSCIPLMLIMVKKGSSLSNSCDSPAVHCILESKLDFDGPMPYSFYFVITPA
AE