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Spg007246 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007246
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationscaffold9:47793427..47793675
RNA-Seq ExpressionSpg007246
SyntenySpg007246
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]1.8e-2983.95Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        M+GK EEKAPVE+LLPLESSPYVKYKDLEEYK+KGYG EGHLEPKPNQ  GGGTDAPTLSGSG+PEV+P +ID VTK+GLI
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]3.3e-2882.72Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        M+GK EEKAPVE+LLPLESSPYVKYKDLEEYK+KGYG EGHL PKPNQ  GGGTDAPTLSGSG PEV+P +ID VTK+GLI
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.2e-2883.13Show/hide
Query:  VGKR-EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQG-GGGGTDAPTLSGSGFPEVKPASIDAVTKEGLIP
        +GKR EEKA VEELLPLESSPYVKYKDLEEYK++GYG EGHLEPKPNQG GGGGTDAPTLSG+GFPEVKP++ID  T +GLIP
Subjt:  VGKR-EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQG-GGGGTDAPTLSGSGFPEVKPASIDAVTKEGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]3.7e-2781.48Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        +V ++EEK  VEELLPLESSPYVKYKDLEEYK+KGYG EGHLEPKPNQ  GGGTDAPTLSGSGFPEVKPA+ID VT  GL+
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]7.5e-2882.72Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        +V ++EEKA VEELLPLESSPYVKYKDLEEYK+KGYG EGHLEPKPNQ  GGGTDAPTLSGSGFPEVKPA+ID VT  GL+
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein1.2e-2684.21Show/hide
Query:  EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        EEKAPVE+LLPLESSPYVKYKDLEEYK+KGYG EGHL PKPNQ  GGGTDAPTLSGSG PEV+P +ID VTK+GLI
Subjt:  EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein8.6e-3083.95Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        M+GK EEKAPVE+LLPLESSPYVKYKDLEEYK+KGYG EGHLEPKPNQ  GGGTDAPTLSGSG+PEV+P +ID VTK+GLI
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

A0A6J1C2A9 uncharacterized protein LOC1110076215.6e-2983.13Show/hide
Query:  VGKR-EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQG-GGGGTDAPTLSGSGFPEVKPASIDAVTKEGLIP
        +GKR EEKA VEELLPLESSPYVKYKDLEEYK++GYG EGHLEPKPNQG GGGGTDAPTLSG+GFPEVKP++ID  T +GLIP
Subjt:  VGKR-EEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQG-GGGGTDAPTLSGSGFPEVKPASIDAVTKEGLIP

A0A6J1FA12 uncharacterized protein LOC1114436391.8e-2781.48Show/hide
Query:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI
        +V ++EEK  VEELLPLESSPYVKYKDLEEYK+KGYG EGHLEPKPNQ  GGGTDAPTLSGSGFPEVKPA+ID VT  GL+
Subjt:  MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLI

A0A7J7C4J8 Uncharacterized protein4.9e-1759.74Show/hide
Query:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGL
        + ++K  V E LP+ESSPYVKY +LE+YK+K YGTEGHL   PNQGGGGGTDAPT+SGSG  + K A +D   + G+
Subjt:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 61.1e-0841.46Show/hide
Query:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLS-----GSGFPEVKPASIDAVTKEGL
        ++E K    + L    +PY+ Y +LE+YK KGYG +GH EPK    GGG TDAPT S     G G      +S DA+ ++G+
Subjt:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLS-----GSGFPEVKPASIDAVTKEGL

AT2G23110.2 Late embryogenesis abundant protein, group 61.1e-0841.46Show/hide
Query:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLS-----GSGFPEVKPASIDAVTKEGL
        ++E K    + L    +PY+ Y +LE+YK KGYG +GH EPK    GGG TDAPT S     G G      +S DA+ ++G+
Subjt:  KREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLS-----GSGFPEVKPASIDAVTKEGL

AT2G23120.1 Late embryogenesis abundant protein, group 62.9e-0661.9Show/hide
Query:  SPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSG
        SPY+    LE+YK K YG EGH EP P   GGG TDAPT SG
Subjt:  SPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 63.6e-1249.35Show/hide
Query:  VGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKE
        + K EEK    + LPLE+SPY KY+D+E+YKK  YGT GH + KP   GGG TDAPT SG    +  P++ID+  ++
Subjt:  VGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGGAAGAGAGAAGAGAAGGCTCCGGTGGAAGAATTGTTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGATTTGGAAGAGTACAAAAAGAAAGGGTATGG
GACGGAGGGGCATCTTGAGCCCAAGCCCAACCAGGGCGGCGGCGGCGGCACAGACGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCGCCTCCATTGACG
CCGTCACCAAAGAAGGCCTTATCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGGAAGAGAGAAGAGAAGGCTCCGGTGGAAGAATTGTTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGATTTGGAAGAGTACAAAAAGAAAGGGTATGG
GACGGAGGGGCATCTTGAGCCCAAGCCCAACCAGGGCGGCGGCGGCGGCACAGACGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCGCCTCCATTGACG
CCGTCACCAAAGAAGGCCTTATCCCCTGA
Protein sequenceShow/hide protein sequence
MVGKREEKAPVEELLPLESSPYVKYKDLEEYKKKGYGTEGHLEPKPNQGGGGGTDAPTLSGSGFPEVKPASIDAVTKEGLIP