; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007262 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007262
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUPF0047 protein YjbQ
Genome locationscaffold9:48106596..48107850
RNA-Seq ExpressionSpg007262
SyntenySpg007262
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001602 - Uncharacterised protein family UPF0047


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591177.1 hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3682.42Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLLW +++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG+DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
KAG7024064.1 yjbQ [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3683.52Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLLWS+++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG+DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
XP_022936473.1 uncharacterized protein LOC111443082 [Cucurbita moschata]2.2e-3683.52Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLLWS+++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG+DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
XP_022976235.1 uncharacterized protein LOC111476694 [Cucurbita maxima]9.1e-3582.42Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLL S+++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
XP_038897717.1 UPF0047 protein C4A8.02c [Benincasa hispida]1.3e-3378.02Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGA+L  AQPLR+KLLW+S++S GN SATA +GN SLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
TrEMBL top hitse value%identityAlignment
A0A0A0L4Q6 Uncharacterized protein3.2e-3378.02Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGA++L AQPLRVKLL S+++S GN SATAG+ NPS MAAAGPKWAQKTV L PHRRGCHLITPKIMKEIGQDLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
A0A1S3BUP9 UPF0047 protein YjbQ1.1e-3379.12Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGA++L AQPLRVKLL S+++S GN SATAG+ NPSLMAAAGPKWAQKTV L PHRRGCHLITPKIMKEIGQDLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
A0A5D3D8K7 UPF0047 protein YjbQ1.1e-3379.12Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGA++L AQPLRVKLL S+++S GN SATAG+ NPSLMAAAGPKWAQKTV L PHRRGCHLITPKIMKEIGQDLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
A0A6J1FDC5 uncharacterized protein LOC1114430821.1e-3683.52Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLLWS+++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG+DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
A0A6J1IIX0 uncharacterized protein LOC1114766944.4e-3582.42Show/hide
Query:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        MQGAVLL AQPLRVKLL S+++S GN SATAG GNPSLMAAAGPKWAQKTV LPPHRRGCHLITPKIMKEIG DLSEFKCG+AHIF + ++
Subjt:  MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21065.1 unknown protein1.4e-1757.14Show/hide
Query:  ATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN
        A   T   S+ +++G KWAQKT+ LPP RRGCHLITPKI+KEI +DLS+F CG+AH+F + ++
Subjt:  ATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGCGCTGTTCTCTTGACTGCACAACCACTCCGCGTAAAGTTGTTGTGGAGCAGCGATACCAGTAGAGGTAATCAGTCCGCCACCGCAGGCACAGGCAATCCAAG
CTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTATGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACACCGAAGATAATGAAGGAAATTGGGCAGG
ACTTGTCAGAATTCAAATGTGGCATTGCTCATATCTTCTGTAGATCTTCTAATCCCGTTTTTCTATTTCGGATATTCATGATGCTAAGGAAGGTGCCACCTGTCTACGAG
GGAGGAGGGATTACGATAGATGTGCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGCGCTGTTCTCTTGACTGCACAACCACTCCGCGTAAAGTTGTTGTGGAGCAGCGATACCAGTAGAGGTAATCAGTCCGCCACCGCAGGCACAGGCAATCCAAG
CTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTATGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACACCGAAGATAATGAAGGAAATTGGGCAGG
ACTTGTCAGAATTCAAATGTGGCATTGCTCATATCTTCTGTAGATCTTCTAATCCCGTTTTTCTATTTCGGATATTCATGATGCTAAGGAAGGTGCCACCTGTCTACGAG
GGAGGAGGGATTACGATAGATGTGCGGTAG
Protein sequenceShow/hide protein sequence
MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNPSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFCRSSNPVFLFRIFMMLRKVPPVYE
GGGITIDVR