CuGenDBv2

Gene ID	Spg007276
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Genome location	scaffold9:48019670..48020522
RNA-Seq Expression	Spg007276
Synteny	Spg007276
Gene Ontology terms	GO:0009765 - photosynthesis, light harvesting (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009522 - photosystem I (cellular component) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6591186.1 Chlorophyll a-b binding protein 7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-41

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF
        MALFQP+TSPSAISSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SSKF
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF

Query:  KALAEEARKD
        KALAE+ARKD
Subjt:  KALAEEARKD

KAG7024072.1 Chlorophyll a-b binding protein 7, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-41

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF
        MALFQP+TSPSAISSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SSKF
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF

Query:  KALAEEARKD
        KALAE+ARKD
Subjt:  KALAEEARKD

XP_022936160.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]

9.6e-42

89.29

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        M MALFQP+TSPSAISSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD

XP_022975375.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita maxima]

6.2e-41

86.61

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        M MALF P+TSPSA+SSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAG+LIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD

XP_023521109.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]

4.3e-42

90.18

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        M MALFQP+TSPSAISSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAEEARKD
Subjt:  KFKALAEEARKD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BVA0 Chlorophyll a-b binding protein, chloroplastic

2.5e-40

84.82

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        + MAL QP+T  S+ISSSSASFYG  LQQLR  TT LNLR++HSI HRSTCRASWQELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKKK+AVANSS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAEEARKD
Subjt:  KFKALAEEARKD

A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic

2.5e-40

86.36

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF
        MAL QP+T  S+ISSSSASFYG  LQQLR  TT LNLR++HSI HRSTCRASWQELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKKK+AVANSSKF
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF

Query:  KALAEEARKD
        KALAEEARKD
Subjt:  KALAEEARKD

A0A5D3D8N7 Chlorophyll a-b binding protein of LHCII type 1 isoform X2

2.5e-40

86.36

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF
        MAL QP+T  S+ISSSSASFYG  LQQLR  TT LNLR++HSI HRSTCRASWQELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKKK+AVANSSKF
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKF

Query:  KALAEEARKD
        KALAEEARKD
Subjt:  KALAEEARKD

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic

4.6e-42

89.29

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        M MALFQP+TSPSAISSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD

A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic

3.0e-41

86.61

Show/hide

Query:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS
        M MALF P+TSPSA+SSSSASFYG SLQQLRSRT ALNLRNS SI HR TC ASWQELAG+LIFSAIPFTAVKAIANSP GESLQRQLEKKK AAVA SS
Subjt:  MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD

SwissProt top hits

e value

%identity

Alignment

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic

9.1e-19

56.76

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSI-HHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSK
        MALFQ     S++SSS +S +         R      RN  ++   RS CRASWQELAGVL+FSAIPFTAVKAIANS +G SL+R+LE+KKK AV NSS+
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSI-HHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSK

Query:  FKALAEEARKD
        FK+ A+EAR D
Subjt:  FKALAEEARKD

Arabidopsis top hits

e value

%identity

Alignment

AT1G76570.1 Chlorophyll A-B binding family protein

6.4e-20

56.76

Show/hide

Query:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSI-HHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSK
        MALFQ     S++SSS +S +         R      RN  ++   RS CRASWQELAGVL+FSAIPFTAVKAIANS +G SL+R+LE+KKK AV NSS+
Subjt:  MALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSI-HHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSK

Query:  FKALAEEARKD
        FK+ A+EAR D
Subjt:  FKALAEEARKD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAATGGCGCTATTTCAGCCATACACTTCACCTTCTGCAATTTCATCTTCCTCCGCCTCATTCTACGGGGGTTCTCTTCAACAACTCCGTTCGCGAACCACTGCCCT
AAATCTTCGAAACAGCCACTCTATCCATCATCGTTCCACTTGCAGAGCTTCGTGGCAGGAGCTTGCGGGGGTTCTGATATTCTCCGCAATCCCCTTCACGGCTGTGAAAG
CCATCGCCAATAGCCCACTCGGAGAGTCGCTCCAGAGGCAATTGGAAAAGAAGAAAAAAGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGA
AAAGATAGGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAMALFQPYTSPSAISSSSASFYGGSLQQLRSRTTALNLRNSHSIHHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKFKALAEEAR
KDR

Spg007276 (gene) of Sponge gourd (cylindrica) v1 genome