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Spg007306 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007306
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold7:30145084..30147221
RNA-Seq ExpressionSpg007306
SyntenySpg007306
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004301918.1 PREDICTED: uncharacterized protein LOC101298139 [Fragaria vesca subsp. vesca]1.4e-0754.24Show/hide
Query:  TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        TS + FP++ +    S KE++EKD+L+ F+KV+VNIPLLDA+KQ+PK  KFLK+ C++K
Subjt:  TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

XP_012458270.1 PREDICTED: uncharacterized protein LOC105779066 [Gossypium raimondii]1.1e-0766.04Show/hide
Query:  PKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        P  L  L K  KEKEEK++L++FKKVEVNIPLLDA KQIP+  KFLKK C+ K
Subjt:  PKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

XP_031270994.1 uncharacterized protein LOC116129387 [Pistacia vera]4.8e-0848.68Show/hide
Query:  PPPAFEKNRETKKPEEKTSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        PP    K  ++++P+   +N  FP +L    KS KE+EEK++L+ F KVEVNIPLLDA+KQ+P+  KFLK+ C+ K
Subjt:  PPPAFEKNRETKKPEEKTSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

XP_038715066.1 uncharacterized protein LOC120008765 [Tripterygium wilfordii]8.2e-0843Show/hide
Query:  EKNRETKKPEEK---------TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRKAEREWGRFTRHPEAAIDQIV
        EKN E K+  +          T  + FP++ +   K+ KE+ EKD+LD F+KV+VNIPLLDA+KQIPK  KFLK+ C+ K      RF  H   A+ + V
Subjt:  EKNRETKKPEEK---------TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRKAEREWGRFTRHPEAAIDQIV

XP_038717228.1 uncharacterized protein LOC120010509 [Tripterygium wilfordii]8.2e-0843Show/hide
Query:  EKNRETKKPEEK---------TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRKAEREWGRFTRHPEAAIDQIV
        EKN E K+  +          T  + FP++ +   K+ KE+ EKD+LD F+KV+VNIPLLDA+KQIPK  KFLK+ C+ K      RF  H   A+ + V
Subjt:  EKNRETKKPEEK---------TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRKAEREWGRFTRHPEAAIDQIV

TrEMBL top hitse value%identityAlignment
A0A1U7YXB3 uncharacterized protein LOC1045880221.5e-0746.15Show/hide
Query:  EKNRETKKPEEKTSNLNFPKKLVLLP-------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        EK +ET  P++ +S    P+ +V  P       KS KE+++ D+L+ F+KVEVNIPLLDA+KQ+P+  KFLK+ C+ K
Subjt:  EKNRETKKPEEKTSNLNFPKKLVLLP-------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

A0A1U7ZJ41 uncharacterized protein LOC1045907248.8e-0846.15Show/hide
Query:  EKNRETKKPEEKTSNLNFPKKLVLLP-------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        EK +ET  P++ +S    P+ +V+ P       KS KE+++KD+++ F+KVEVN PLLDA+KQ+P+  KFLKK C+ K
Subjt:  EKNRETKKPEEKTSNLNFPKKLVLLP-------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

A0A1U8IMD8 uncharacterized protein LOC1078982578.8e-0866.04Show/hide
Query:  PKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        P  L  L K  KEKEEK++L+ FKKVEVNIPLLDA+KQIP+  KFLKK C+ K
Subjt:  PKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

A0A6P4PUR3 uncharacterized protein LOC1084814822.0e-0748.1Show/hide
Query:  EKNRETKKPEEKTSNLNFPKKLVLLP--------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        EK RE +  +      +  +KLV++P        +  KEKEEK++L+ F+KVEVNIPLLDA+KQIP+  KFLK+ C+RK
Subjt:  EKNRETKKPEEKTSNLNFPKKLVLLP--------KSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

A0A6P6U8Z9 uncharacterized protein LOC1137084411.5e-0754.24Show/hide
Query:  TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK
        T+N N P     L K+ + K+EK++LD+F+KVE+NIPLLDA+K IPK  KFLK  C+ K
Subjt:  TSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCTAACCCACAATTCCCTCCTCCGCCTGCATTCGAAAAGAATAGAGAGACAAAGAAGCCTGAAGAGAAGACGAGCAATCTCAACTTTCCAAAGAAATTAGTGTT
GCTGCCTAAGTCTCCCAAGGAAAAGGAAGAAAAGGACATGCTTGACCTATTCAAAAAAGTGGAGGTCAACATCCCGCTTCTGGACGCCGTAAAGCAAATTCCTAAGGTAG
GAAAATTTCTAAAGAAATGGTGCTCCAGGAAAGCTGAGAGGGAATGGGGTAGGTTCACTAGGCACCCCGAGGCTGCCATAGACCAGATAGTAAGGGAATTTTACGCTAAC
ATGGTGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATTATCCCTTTCGACTCGGCCTCCATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCTAACCCACAATTCCCTCCTCCGCCTGCATTCGAAAAGAATAGAGAGACAAAGAAGCCTGAAGAGAAGACGAGCAATCTCAACTTTCCAAAGAAATTAGTGTT
GCTGCCTAAGTCTCCCAAGGAAAAGGAAGAAAAGGACATGCTTGACCTATTCAAAAAAGTGGAGGTCAACATCCCGCTTCTGGACGCCGTAAAGCAAATTCCTAAGGTAG
GAAAATTTCTAAAGAAATGGTGCTCCAGGAAAGCTGAGAGGGAATGGGGTAGGTTCACTAGGCACCCCGAGGCTGCCATAGACCAGATAGTAAGGGAATTTTACGCTAAC
ATGGTGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATTATCCCTTTCGACTCGGCCTCCATTAACTAA
Protein sequenceShow/hide protein sequence
MSPNPQFPPPPAFEKNRETKKPEEKTSNLNFPKKLVLLPKSPKEKEEKDMLDLFKKVEVNIPLLDAVKQIPKVGKFLKKWCSRKAEREWGRFTRHPEAAIDQIVREFYAN
MVEGSTTSFVRGKIIPFDSASIN