; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007307 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007307
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein
Genome locationscaffold7:30176213..30189387
RNA-Seq ExpressionSpg007307
SyntenySpg007307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.4e-1165.57Show/hide
Query:  GYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK
        GYI LLTLSVLRDN+ VV            SAGR PLHRRTSKRWLYWACPTQR  V+ +K
Subjt:  GYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]2.7e-1070.18Show/hide
Query:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK
        L TLSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRSV+ +K
Subjt:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]2.7e-1070.18Show/hide
Query:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK
        L TLSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRSV+ +K
Subjt:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]3.8e-0956.25Show/hide
Query:  ISSGYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK
        + + YI LLTLSVLRDN+ ++            SAGR PLHRRTSKRWLYWAC TQR  V+ +K
Subjt:  ISSGYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK

TrEMBL top hitse value%identityAlignment
A0A5A7SUV2 Uncharacterized protein6.9e-0460.47Show/hide
Query:  ISSGYIPLLTLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPT
        + +GY+ LLTL+VLRDNDA+VSAGR PL +R   +W  WA PT
Subjt:  ISSGYIPLLTLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPT

A0A5A7TCY8 DNA/RNA polymerases superfamily protein2.6e-1165.57Show/hide
Query:  GYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK
        GYI LLTLSVLRDN+ VV            SAGR PLHRRTSKRWLYWACPTQR  V+ +K
Subjt:  GYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK

A0A5A7VGQ5 Uncharacterized protein1.3e-1070.18Show/hide
Query:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK
        L TLSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRSV+ +K
Subjt:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK

A0A5D3BG85 Uncharacterized protein1.3e-1070.18Show/hide
Query:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK
        L TLSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRSV+ +K
Subjt:  LLTLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSVITIK

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein1.9e-0956.25Show/hide
Query:  ISSGYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK
        + + YI LLTLSVLRDN+ ++            SAGR PLHRRTSKRWLYWAC TQR  V+ +K
Subjt:  ISSGYIPLLTLSVLRDNDAVV------------SAGRAPLHRRTSKRWLYWACPTQRRSVITIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATACCCCTGCTCGCATGTCTACTACATGGACGCTTTGGATCAATACGTTTGTATCATATACAAAGTGGGTCGTATCACATAGTGTTACCAGGATAAGTACTGGAGTTGC
ATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTAGTAGTTGTGCTAGTGATAATGCTACTGCTAGTGTTGATTTGAGATTTGATGATGAAATAATGGACCTAGATGAGGATG
AAAACTTCAACTATGATATAATACCTCAGTTCAAAAGTGTTGAGACCACAAACCCGCCGCATAGCCGCCGCCTCCCTCCCGTCGACAACCAGCTCGTGCCGCCGCTGTTC
CGACCCAGCACGCCGCCGTCAAGTGTTGGTTGCAGCAGCCATAGTCAAATTTCTAGTGTCGTTGGGCTTCATTCTCCACCGAAAATCGAGCCCCAAGCACCGCCAACCGT
GAGAACCCATCCCGAGCCACCACCCGTCGCGCAGCCTAAGCCCCGTCGCCCTCTCTCGCGCGTCCCTCTCTCTCTTCAGATGGGTTTCGTAGTTCAAATCCCTTCCTCTG
CGTTTTTCAGCCTTAATCTCGTGGATTCGTGCGTGTTCAGCAACCCGGGCCTTGTCTTCTCGCATGTTCATCTCTGTCCAGCGGGTAGTTTGGCTGTAGATCGCTCCGTT
CGTGTCGTCTTTGCTCAAATCGTGGGTGTCTCGGCGTTGTTTAATCAATTTCGGGCTTTTGGATTGTTGGAATTGCTTGGGAGCGCCATAGTTGCGGAGCATGACGCGGA
AATCATGTGGTGTCTAGTGCATGCGTTGCATAGTGTCAGAGATAGAGAAAGGGCAGTAGAGAACCTCGAATCTGTGTTGTCTGTGTTTGGGGCGTTTCGGGACAAATCAA
TTGAGAATCTCATTTTCATTTCTTCAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGG
ACTAGTAAACGTTGGTTGTACTGGGCGTGTCCTACACAACGTAGATCGGTCATAACAATCAAGAATCATCCGTTGAAGTATTCAGAGTCGTCAACGGAGGACCTCTGGGG
TGGGGTGAAAGACATCCTATTCATTCTCTTACTCTCAGAGAATTCTCCTGAAGGCTCCCACTGGTCTCCTGCCTCTAGTAGTCTCAGAATCATACCGGTAATGTGTTGCA
AACGCATTAGCGACAAGACGCTGTGCATCGGCGTCTCGACGCTGTCTCGATTCCAAGGCGGGGAGAAGAAGCCTCAGCGTCGAGACGCTGCTTGCGGCGTCTCGATGCTG
TCACGAGTGCGACGCAAATTAGGGTTTCCATGA
mRNA sequenceShow/hide mRNA sequence
GATACCCCTGCTCGCATGTCTACTACATGGACGCTTTGGATCAATACGTTTGTATCATATACAAAGTGGGTCGTATCACATAGTGTTACCAGGATAAGTACTGGAGTTGC
ATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTAGTAGTTGTGCTAGTGATAATGCTACTGCTAGTGTTGATTTGAGATTTGATGATGAAATAATGGACCTAGATGAGGATG
AAAACTTCAACTATGATATAATACCTCAGTTCAAAAGTGTTGAGACCACAAACCCGCCGCATAGCCGCCGCCTCCCTCCCGTCGACAACCAGCTCGTGCCGCCGCTGTTC
CGACCCAGCACGCCGCCGTCAAGTGTTGGTTGCAGCAGCCATAGTCAAATTTCTAGTGTCGTTGGGCTTCATTCTCCACCGAAAATCGAGCCCCAAGCACCGCCAACCGT
GAGAACCCATCCCGAGCCACCACCCGTCGCGCAGCCTAAGCCCCGTCGCCCTCTCTCGCGCGTCCCTCTCTCTCTTCAGATGGGTTTCGTAGTTCAAATCCCTTCCTCTG
CGTTTTTCAGCCTTAATCTCGTGGATTCGTGCGTGTTCAGCAACCCGGGCCTTGTCTTCTCGCATGTTCATCTCTGTCCAGCGGGTAGTTTGGCTGTAGATCGCTCCGTT
CGTGTCGTCTTTGCTCAAATCGTGGGTGTCTCGGCGTTGTTTAATCAATTTCGGGCTTTTGGATTGTTGGAATTGCTTGGGAGCGCCATAGTTGCGGAGCATGACGCGGA
AATCATGTGGTGTCTAGTGCATGCGTTGCATAGTGTCAGAGATAGAGAAAGGGCAGTAGAGAACCTCGAATCTGTGTTGTCTGTGTTTGGGGCGTTTCGGGACAAATCAA
TTGAGAATCTCATTTTCATTTCTTCAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGG
ACTAGTAAACGTTGGTTGTACTGGGCGTGTCCTACACAACGTAGATCGGTCATAACAATCAAGAATCATCCGTTGAAGTATTCAGAGTCGTCAACGGAGGACCTCTGGGG
TGGGGTGAAAGACATCCTATTCATTCTCTTACTCTCAGAGAATTCTCCTGAAGGCTCCCACTGGTCTCCTGCCTCTAGTAGTCTCAGAATCATACCGGTAATGTGTTGCA
AACGCATTAGCGACAAGACGCTGTGCATCGGCGTCTCGACGCTGTCTCGATTCCAAGGCGGGGAGAAGAAGCCTCAGCGTCGAGACGCTGCTTGCGGCGTCTCGATGCTG
TCACGAGTGCGACGCAAATTAGGGTTTCCATGA
Protein sequenceShow/hide protein sequence
DTPARMSTTWTLWINTFVSYTKWVVSHSVTRISTGVASVSVSSGSGGSSCASDNATASVDLRFDDEIMDLDEDENFNYDIIPQFKSVETTNPPHSRRLPPVDNQLVPPLF
RPSTPPSSVGCSSHSQISSVVGLHSPPKIEPQAPPTVRTHPEPPPVAQPKPRRPLSRVPLSLQMGFVVQIPSSAFFSLNLVDSCVFSNPGLVFSHVHLCPAGSLAVDRSV
RVVFAQIVGVSALFNQFRAFGLLELLGSAIVAEHDAEIMWCLVHALHSVRDRERAVENLESVLSVFGAFRDKSIENLIFISSGYIPLLTLSVLRDNDAVVSAGRAPLHRR
TSKRWLYWACPTQRRSVITIKNHPLKYSESSTEDLWGGVKDILFILLLSENSPEGSHWSPASSSLRIIPVMCCKRISDKTLCIGVSTLSRFQGGEKKPQRRDAACGVSML
SRVRRKLGFP