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Spg007314 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007314
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTim44 domain-containing protein
Genome locationscaffold2:37025680..37029790
RNA-Seq ExpressionSpg007314
SyntenySpg007314
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054521.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa]2.3e-0828.93Show/hide
Query:  HLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQNRRVWGLLEMAMTELLPPPKALRRLDNGLLKEKESE
        H R +  GRK+ IEER+G R+ +L++++GT AW+R CL+A  +   P  FWRRR LE  ++    +   G   +A                    E   E
Subjt:  HLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQNRRVWGLLEMAMTELLPPPKALRRLDNGLLKEKESE

Query:  GDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVG---ELAFDCSSAVIFERINIDIQ
        G    EG  K+    + V K   S +E +  P +     +L  DC + VI +  +  ++
Subjt:  GDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVG---ELAFDCSSAVIFERINIDIQ

TYK14183.1 hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]4.9e-1126.61Show/hide
Query:  RVNIDWKVFHLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ--------------------NRRV---
        ++ ID K F +      RK+ IEER+G    +L++D GT AW+R CL+    +     FW+RR LE A+IFFQ                      R+   
Subjt:  RVNIDWKVFHLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ--------------------NRRV---

Query:  -------WGLLEMAMTELLPPPKALRRLDNGLLKEKESEGDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVGELAFDCSSAVIFERINIDIQWMGIR
               W  L   ++ LLP         +G + +K     Q  +         ++VR+       R +   +  E AF+  S VI +++     W  ++
Subjt:  -------WGLLEMAMTELLPPPKALRRLDNGLLKEKESEGDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVGELAFDCSSAVIFERINIDIQWMGIR

Query:  ETCSNVAKIGFILKPVCINLAVGRCGSEKEAKEMIDSCKGQQPECFII
        +       I    K  C NLAVG  GS+ EAK  +    G  PE  ++
Subjt:  ETCSNVAKIGFILKPVCINLAVGRCGSEKEAKEMIDSCKGQQPECFII

XP_022159272.1 uncharacterized protein LOC111025682 [Momordica charantia]8.1e-0696.43Show/hide
Query:  GALKVSMLSPGFIYEPYSPRQAIPFWQR
        GALKVSMLSPGFIYEPYSPRQ IPFWQR
Subjt:  GALKVSMLSPGFIYEPYSPRQAIPFWQR

XP_038879465.1 uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida]8.1e-0696.43Show/hide
Query:  GALKVSMLSPGFIYEPYSPRQAIPFWQR
        GALKVSMLSPGFIYEPYSPRQ IPFWQR
Subjt:  GALKVSMLSPGFIYEPYSPRQAIPFWQR

XP_038879466.1 uncharacterized protein LOC120071330 isoform X2 [Benincasa hispida]8.1e-0696.43Show/hide
Query:  GALKVSMLSPGFIYEPYSPRQAIPFWQR
        GALKVSMLSPGFIYEPYSPRQ IPFWQR
Subjt:  GALKVSMLSPGFIYEPYSPRQAIPFWQR

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ5 Uncharacterized protein3.0e-0644.12Show/hide
Query:  KVFHLRKNGD-GRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ
        K  +L++N   GRK+ IEE +G R  +L++++G  AW+  CL+A  +   P GFW RR LE   IFFQ
Subjt:  KVFHLRKNGD-GRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ

A0A5A7ULV4 Transcription elongation factor B polypeptide 3 isoform X21.1e-0828.93Show/hide
Query:  HLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQNRRVWGLLEMAMTELLPPPKALRRLDNGLLKEKESE
        H R +  GRK+ IEER+G R+ +L++++GT AW+R CL+A  +   P  FWRRR LE  ++    +   G   +A                    E   E
Subjt:  HLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQNRRVWGLLEMAMTELLPPPKALRRLDNGLLKEKESE

Query:  GDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVG---ELAFDCSSAVIFERINIDIQ
        G    EG  K+    + V K   S +E +  P +     +L  DC + VI +  +  ++
Subjt:  GDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVG---ELAFDCSSAVIFERINIDIQ

A0A5D3CJ04 39S ribosomal protein L458.7e-0690Show/hide
Query:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR
        +K ALKVSMLSPGFIYEPYSPRQ IPFWQR
Subjt:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR

A0A5D3CQQ0 Uncharacterized protein2.4e-1126.61Show/hide
Query:  RVNIDWKVFHLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ--------------------NRRV---
        ++ ID K F +      RK+ IEER+G    +L++D GT AW+R CL+    +     FW+RR LE A+IFFQ                      R+   
Subjt:  RVNIDWKVFHLRKNGDGRKVVIEERHGSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQ--------------------NRRV---

Query:  -------WGLLEMAMTELLPPPKALRRLDNGLLKEKESEGDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVGELAFDCSSAVIFERINIDIQWMGIR
               W  L   ++ LLP         +G + +K     Q  +         ++VR+       R +   +  E AF+  S VI +++     W  ++
Subjt:  -------WGLLEMAMTELLPPPKALRRLDNGLLKEKESEGDQIEEGVRKTNSFAEIVRKGPKSGIERDNLPSEVGELAFDCSSAVIFERINIDIQWMGIR

Query:  ETCSNVAKIGFILKPVCINLAVGRCGSEKEAKEMIDSCKGQQPECFII
        +       I    K  C NLAVG  GS+ EAK  +    G  PE  ++
Subjt:  ETCSNVAKIGFILKPVCINLAVGRCGSEKEAKEMIDSCKGQQPECFII

A0A6J1DZD4 uncharacterized protein LOC1110256823.9e-0696.43Show/hide
Query:  GALKVSMLSPGFIYEPYSPRQAIPFWQR
        GALKVSMLSPGFIYEPYSPRQ IPFWQR
Subjt:  GALKVSMLSPGFIYEPYSPRQAIPFWQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27395.1 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein7.3e-0556.67Show/hide
Query:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR
        + GA++VSM+SPGF+YEPY+ R+ I  W+R
Subjt:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR

AT5G27395.2 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein7.3e-0556.67Show/hide
Query:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR
        + GA++VSM+SPGF+YEPY+ R+ I  W+R
Subjt:  RKGALKVSMLSPGFIYEPYSPRQAIPFWQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAAGTTATCCATGGTAGAGTTGATACCTGTGATCAGTTGTTGAAAAGGATGCCGTCCTTGGTTGGCCTGTTCTGTTATCACAAGGAGATGATCGAGGAGTTCCT
CCTCCATCTGCCGATTCGTGAGAAGGCGAAATTTTTGCGGTGTTTTGTAATTATCCGTAAGGGAGCCCTCAAAGTTTCCATGTTGAGTCCTGGATTCATCTATGAACCTT
ATTCACCTCGTCAAGCAATCCCATTTTGGCAAAGGGTGAACATCGATTGGAAGGTGTTTCACCTTCGCAAGAATGGGGATGGGAGGAAAGTGGTTATTGAGGAGAGGCAT
GGATCGAGAACGAGTCGCCTGGACGTGGATGTGGGCACTTTCGCGTGGATTAGGTATTGCCTTATGGCAGTGACGAAATCAGAGAAACCGAACGGATTCTGGAGAAGGAG
GAAACTAGAGGCCGCGTTAATTTTCTTCCAGAATCGCAGAGTTTGGGGGTTGCTTGAGATGGCCATGACTGAATTGCTTCCCCCTCCAAAAGCGCTCAGACGGCTCGATA
ATGGGTTACTTAAAGAGAAAGAGAGTGAAGGAGACCAAATTGAGGAAGGGGTTCGAAAGACCAACTCTTTTGCAGAAATAGTGAGAAAGGGGCCTAAGTCAGGAATCGAG
AGGGATAATTTACCATCGGAAGTTGGGGAGCTTGCCTTCGACTGCTCCTCGGCGGTCATCTTCGAGAGGATCAACATCGACATACAATGGATGGGTATAAGAGAAACGTG
CTCAAATGTGGCAAAGATAGGGTTCATCCTTAAACCCGTTTGTATTAACCTTGCAGTGGGACGTTGCGGGAGCGAGAAAGAAGCCAAGGAGATGATCGATTCGTGTAAGG
GGCAGCAACCAGAATGCTTCATAATCCACCCGTGGGATTGCAACCTGCTTGTTGAGAGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCAAGTTATCCATGGTAGAGTTGATACCTGTGATCAGTTGTTGAAAAGGATGCCGTCCTTGGTTGGCCTGTTCTGTTATCACAAGGAGATGATCGAGGAGTTCCT
CCTCCATCTGCCGATTCGTGAGAAGGCGAAATTTTTGCGGTGTTTTGTAATTATCCGTAAGGGAGCCCTCAAAGTTTCCATGTTGAGTCCTGGATTCATCTATGAACCTT
ATTCACCTCGTCAAGCAATCCCATTTTGGCAAAGGGTGAACATCGATTGGAAGGTGTTTCACCTTCGCAAGAATGGGGATGGGAGGAAAGTGGTTATTGAGGAGAGGCAT
GGATCGAGAACGAGTCGCCTGGACGTGGATGTGGGCACTTTCGCGTGGATTAGGTATTGCCTTATGGCAGTGACGAAATCAGAGAAACCGAACGGATTCTGGAGAAGGAG
GAAACTAGAGGCCGCGTTAATTTTCTTCCAGAATCGCAGAGTTTGGGGGTTGCTTGAGATGGCCATGACTGAATTGCTTCCCCCTCCAAAAGCGCTCAGACGGCTCGATA
ATGGGTTACTTAAAGAGAAAGAGAGTGAAGGAGACCAAATTGAGGAAGGGGTTCGAAAGACCAACTCTTTTGCAGAAATAGTGAGAAAGGGGCCTAAGTCAGGAATCGAG
AGGGATAATTTACCATCGGAAGTTGGGGAGCTTGCCTTCGACTGCTCCTCGGCGGTCATCTTCGAGAGGATCAACATCGACATACAATGGATGGGTATAAGAGAAACGTG
CTCAAATGTGGCAAAGATAGGGTTCATCCTTAAACCCGTTTGTATTAACCTTGCAGTGGGACGTTGCGGGAGCGAGAAAGAAGCCAAGGAGATGATCGATTCGTGTAAGG
GGCAGCAACCAGAATGCTTCATAATCCACCCGTGGGATTGCAACCTGCTTGTTGAGAGGAAATAG
Protein sequenceShow/hide protein sequence
MWQVIHGRVDTCDQLLKRMPSLVGLFCYHKEMIEEFLLHLPIREKAKFLRCFVIIRKGALKVSMLSPGFIYEPYSPRQAIPFWQRVNIDWKVFHLRKNGDGRKVVIEERH
GSRTSRLDVDVGTFAWIRYCLMAVTKSEKPNGFWRRRKLEAALIFFQNRRVWGLLEMAMTELLPPPKALRRLDNGLLKEKESEGDQIEEGVRKTNSFAEIVRKGPKSGIE
RDNLPSEVGELAFDCSSAVIFERINIDIQWMGIRETCSNVAKIGFILKPVCINLAVGRCGSEKEAKEMIDSCKGQQPECFIIHPWDCNLLVERK