CuGenDBv2

Gene ID	Spg007316
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	39S ribosomal protein L45, mitochondrial isoform X1
Genome location	scaffold2:37008942..37019764
RNA-Seq Expression	Spg007316
Synteny	Spg007316
Gene Ontology terms	NA
InterPro domains	IPR032710 - NTF2-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GAY63902.1 hypothetical protein CUMW_229370 [Citrus unshiu]

2.3e-40

45.19

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTR GWRRTKDDIILE                                              LKSAYAIAKLRK GYSK++FY EAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF
              EINTL+ANGDKTSLRKAVTE MYSALKNEIK RES W+ V WE+I P++K+RTLRARLAS               + +    L +    L L F
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL
        L  + +YV      LV   SLKH I KV  L E  LRR L   SG+L+NL F   L G  VGG +S++++
Subjt:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL

KAG6590370.1 hypothetical protein SDJN03_15793, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-61

58.52

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF
              EINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRT                      LVLIEVT KRFSYSLPLRF
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL
        LP+R               SLKH + KV SLLE +LRR L VISGYLRNLFF REL GVSVG FQSNIIL
Subjt:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL

XP_006471879.1 uncharacterized protein LOC102626770 isoform X1 [Citrus sinensis]

1.3e-40

44.81

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTR GWRRTKDDIILE                                              LKSAYAIAKLRK GYSK++FY EAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF
              EINTL+ANGDKTSLRKAVTE MYSALKNEIK RES W+ V WE+I P++K+RTLRARL     +                  L +    L L F
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL
        L  + +YV      LV   SLKH I KV  L E  LRR L V SG+L+NL F   L G  VGG +S++++
Subjt:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL

XP_006471882.1 uncharacterized protein LOC102626770 isoform X3 [Citrus sinensis]

1.3e-40

44.81

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTR GWRRTKDDIILE                                              LKSAYAIAKLRK GYSK++FY EAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF
              EINTL+ANGDKTSLRKAVTE MYSALKNEIK RES W+ V WE+I P++K+RTLRARL     +                  L +    L L F
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL
        L  + +YV      LV   SLKH I KV  L E  LRR L V SG+L+NL F   L G  VGG +S++++
Subjt:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL

XP_038879466.1 uncharacterized protein LOC120071330 isoform X2 [Benincasa hispida]

5.7e-39

62.8

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
              EINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL

TrEMBL top hits

e value

%identity

Alignment

A0A2H5QH18 Tim44 domain-containing protein

1.1e-40

45.19

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTR GWRRTKDDIILE                                              LKSAYAIAKLRK GYSK++FY EAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF
              EINTL+ANGDKTSLRKAVTE MYSALKNEIK RES W+ V WE+I P++K+RTLRARLAS               + +    L +    L L F
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL
        L  + +YV      LV   SLKH I KV  L E  LRR L   SG+L+NL F   L G  VGG +S++++
Subjt:  LPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVISGYLRNLFFTRELIGVSVGGFQSNIIL

A0A6J1HEF0 uncharacterized protein LOC111462108 isoform X2

3.0e-38

61.59

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
              EINTLIANGDKTSLRKAVTE MYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL

A0A6J1HUF6 uncharacterized protein LOC111467908 isoform X1

6.1e-39

62.2

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
              EINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL

A0A6J1HZ27 uncharacterized protein LOC111467908 isoform X2

6.1e-39

62.2

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
              EINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL

A0A6J1I0M8 uncharacterized protein LOC111467908 isoform X3

6.1e-39

62.2

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Query:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA
        WFTRSGWRRTKDDIILE                                              LKSAYAIAKLRKKGYSKKQFYEEAV LYK        
Subjt:  WFTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFA

Query:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL
              EINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL
Subjt:  SISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27395.1 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein

6.9e-27

39.73

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Query:  FTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFAS
        FTRSGWRRTK+D I E                                              L+SAYAIAKLRK GYSK  FY EA++LYK         
Subjt:  FTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFAS

Query:  ISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRF-SYSLPLRF
             +IN  +ANG+K ++RK VTE MYSALKNEIK RE+ W+ VYWEM+ PVVKIRTL+ARL             AF++L L  +T ++F +Y      
Subjt:  ISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRF-SYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHT
             +  V   D  V+  SL HT
Subjt:  LPNRYSYVVRSTDTLVWLASLKHT

AT5G27395.2 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein

6.9e-27

39.73

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Query:  FTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFAS
        FTRSGWRRTK+D I E                                              L+SAYAIAKLRK GYSK  FY EA++LYK         
Subjt:  FTRSGWRRTKDDIILESCFFEELDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFAS

Query:  ISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRF-SYSLPLRF
             +IN  +ANG+K ++RK VTE MYSALKNEIK RE+ W+ VYWEM+ PVVKIRTL+ARL             AF++L L  +T ++F +Y      
Subjt:  ISVLGEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRF-SYSLPLRF

Query:  LPNRYSYVVRSTDTLVWLASLKHT
             +  V   D  V+  SL HT
Subjt:  LPNRYSYVVRSTDTLVWLASLKHT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGAGGATTGAAAGCTAGGATGTTTGAGAGGTTTAGGCCATCTGAGAAGGAGTTATCGGAGATGCTAGAGACACTGTTGGAGATCACTTACTTGAACGAGTTGAAATC
GACCGTTAGGGCAATCGTTGTGAGCAGGAGACCTATTGGGCTAGAAAAGATCATGACTGAAGCCCAATTAATCGAGGATAGGGACGTGACCATACAATTGGTCATTGATA
TGATGTTTGGCCATGGAAGCTCTCAAAATGGGCCTAATGAATGGTTCACAAGAAGTGGTTGGAGAAGAACAAAAGATGATATCATTTTAGAGAGTTGTTTCTTTGAGGAG
CTTGACTTCTATTTTGCTAGGTCTAGAGGTTGCAGAGAGGTGATCGAGGAGTTCCTTTTTCACCTGCCCTGCCCTTTCTCGAGAAGAGGAGGTTTTTGTGGTAAGTTGGA
ATGTGTGCAGCTAAAAAGTGCGTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGAAACAATTTTACGAAGAGGCTGTAAAATTATATAAAGAGGTCCAAGAGT
TTGCTTTTGCTTCCATATCTGTTCTTGGAGAAATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGCATTGAAG
AATGAAATCAAACTTAGAGAATCCAAATGGAACAAAGTTTACTGGGAAATGATTGTACCAGTTGTTAAGATCCGCACATTACGAGCTAGATTGGCAAGTACTAAGTATCA
CATTTCTGTTTGTCCTATTCATGCATTTGTCAGATTGGTGTTGATCGAAGTGACCTTGAAAAGGTTTTCGTACAGCTTACCCTTGAGATTCTTGCCAAACAGATATAGTT
ATGTCGTAAGAAGCACGGACACTTTAGTTTGGCTAGCAAGTTTGAAGCATACAATTCTGAAGGTGCAGTCGTTGCTGGAGACAGATCTAAGGAGGTCCTTGTACGTGATA
TCTGGGTATTTGAGAAATCTCTTTTTCACGAGGGAGCTTATTGGCGTCTCTGTGGGCGGATTCCAATCTAATATCATCCTTCAACCATCACATCGAGTGCATGAACCATG
TACTTCATTGTTCTTGTCTGAACCGATCACGAGGATGATTGGTACATCGACTGCAGGTCATCATCTGAATCTGCATATTGAAGTTATAGTATCTCTCTTAATAGTTGCTT
ACAAATGCTTGAAGGCTTATCATTATTATTCATTCCTGGTGTTTAAGTGA

mRNA sequence

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Protein sequence

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MRGLKARMFERFRPSEKELSEMLETLLEITYLNELKSTVRAIVVSRRPIGLEKIMTEAQLIEDRDVTIQLVIDMMFGHGSSQNGPNEWFTRSGWRRTKDDIILESCFFEE
LDFYFARSRGCREVIEEFLFHLPCPFSRRGGFCGKLECVQLKSAYAIAKLRKKGYSKKQFYEEAVKLYKEVQEFAFASISVLGEINTLIANGDKTSLRKAVTENMYSALK
NEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTKYHISVCPIHAFVRLVLIEVTLKRFSYSLPLRFLPNRYSYVVRSTDTLVWLASLKHTILKVQSLLETDLRRSLYVI
SGYLRNLFFTRELIGVSVGGFQSNIILQPSHRVHEPCTSLFLSEPITRMIGTSTAGHHLNLHIEVIVSLLIVAYKCLKAYHYYSFLVFK

Spg007316 (gene) of Sponge gourd (cylindrica) v1 genome