; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007338 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007338
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:36848105..36849434
RNA-Seq ExpressionSpg007338
SyntenySpg007338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]5.3e-1429.61Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        +GW +  + P    +PLVREFYA + +  Q T+ ++   V F+ R IN                                 +G  WQ S  G  T +  +
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFC-GHKNVGRLFFPTLITKLCRLAGV
        LK  A +W + +    MP+TH  T+++ RV+LLY++  G+ +N++ I   +I  C   +  G L+FP+LIT+L   A V
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFC-GHKNVGRLFFPTLITKLCRLAGV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.0e-1731.25Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        + W +    P+   +PLVREFYA + + ++ T+ +RG  V +S   IN                                  G +W  S  G  T +   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
        L   A VW + +K+ ++PTTH  T+S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.0e-1731.25Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        + W +    P+   +PLVREFYA + +  + T+ +RG  V +S   IN                                  G +W  S  G  T +   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
        L   A VW + +K+ ++PTTH  T+S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.9e-1631.61Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQINQ---------------------------------GVKWQESRTGIQTLLSGD
        + W      P+   +PLVREFY  +      T+ +RG  V  SV  IN                                  G +W  S  G  T L   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQINQ---------------------------------GVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCR
        L   A VW + +K+ ++PTTH  T+S++ V LLY+M  G  +N+ R+I  +I  C  +  G LFFP+LIT +CR
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCR

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]8.1e-1532.1Show/hide
Query:  IPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGDLKLEAVVWLYVIKN
        +PLVREFYA + +  + T+ +RG  V +S   IN                                  G +W  S  G  T +   L   A VW + +K+
Subjt:  IPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGDLKLEAVVWLYVIKN

Query:  GIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
         ++PTTH   +S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  GIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.0e-1831.25Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        + W +    P+   +PLVREFYA + + ++ T+ +RG  V +S   IN                                  G +W  S  G  T +   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
        L   A VW + +K+ ++PTTH  T+S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

A0A2P5BCG4 Uncharacterized protein (Fragment)1.4e-1731.25Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        + W +    P+   +PLVREFYA + +  + T+ +RG  V +S   IN                                  G +W  S  G  T +   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
        L   A VW + +K+ ++PTTH  T+S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

A0A2P5DAQ2 Uncharacterized protein9.4e-1731.61Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQINQ---------------------------------GVKWQESRTGIQTLLSGD
        + W      P+   +PLVREFY  +      T+ +RG  V  SV  IN                                  G +W  S  G  T L   
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQINQ---------------------------------GVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCR
        L   A VW + +K+ ++PTTH  T+S++ V LLY+M  G  +N+ R+I  +I  C  +  G LFFP+LIT +CR
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCR

A0A2P5DXM3 Uncharacterized protein3.9e-1532.1Show/hide
Query:  IPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGDLKLEAVVWLYVIKN
        +PLVREFYA + +  + T+ +RG  V +S   IN                                  G +W  S  G  T +   L   A VW + +K+
Subjt:  IPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGDLKLEAVVWLYVIKN

Query:  GIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA
         ++PTTH   +S+ R++LL++M  G  +N+ R+I ++I  C  +  G LFFP+LIT+LCR A
Subjt:  GIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVGRLFFPTLITKLCRLA

W9QTD9 Uncharacterized protein2.6e-1429.61Show/hide
Query:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD
        +GW +  + P    +PLVREFYA + +  Q T+ ++   V F+ R IN                                 +G  WQ S  G  T +  +
Subjt:  YGWDRLIKEPKAASIPLVREFYAQIGEEMQTTMLLRGRVVEFSVRQIN---------------------------------QGVKWQESRTGIQTLLSGD

Query:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFC-GHKNVGRLFFPTLITKLCRLAGV
        LK  A +W + +    MP+TH  T+++ RV+LLY++  G+ +N++ I   +I  C   +  G L+FP+LIT+L   A V
Subjt:  LKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFC-GHKNVGRLFFPTLITKLCRLAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCCCAAATAAAAGACCAATTAGATGAGGAAGAAAGAAGAAAGAAGAAGGAGGCCAAGAAAAAGCAGAGGGAAGAAGAAGAACAAGCTGCACTAGACTTTGCATC
TTCGTGCCTCAAAGACTTAGTGGATGCCACTGAGAAAGAAGAAGAAGAAGAGATTGCGCCCGCTTCTGAGGGCCAATCTAAAAGATATCAAATCCCACCACCACCACATG
AGGAAGAAAATGTGCTCGAGGACCTGTTCGAGCGTCTAAATGAAGCAATGTTCGAGGACTTGTTCGAACACGAGCAAGAAGAGGAGAAGAAGGCTCCTATTGTTGTGATG
AGGTCTTGGAGATCTCTAAGGACCAAATGCCCAAGAGGGGCAGAGAAGAAGATGATAGCGAGGCCGAAAGGAAGGCTAAAAAGAAGAAAAAGACTAACATTTTCCTCAGG
AGGCCAAGCACTGGGGGAGCGACTTCTGTGCTTCCTTGAGCCAAGACACCACCACCACCGCCTGCAAGGGGAGAACCCTCCATTCCTTGGCCAAAGAAGACTCCTACCAA
GAAGTCGAGAGTGGAAGTACGAGTGGAGTCCTATCCAGACACTCAGGCCCGCCTGGTATGGCTGGGATCGATTGATCAAGGAGCCAAAAGCAGCTTCTATCCCCTTGGTA
CGTGAATTCTATGCACAGATTGGGGAGGAAATGCAGACAACAATGCTCCTACGAGGCCGAGTGGTGGAGTTCTCGGTGAGACAAATCAATCAGGGAGTAAAGTGGCAAGA
GTCAAGGACAGGGATCCAGACTCTATTATCTGGAGATTTGAAGCTAGAAGCAGTGGTCTGGCTATATGTGATCAAGAACGGAATCATGCCAACAACGCATGACACTACCA
TCTCTCAGAAACGTGTCATGTTGTTGTACAACATGTACAAGGGGCTGGATCTCAACCTCGATCGAATCATTTGGACAAAGATCCTCTTCTGTGGACACAAGAACGTGGGA
AGGTTGTTCTTCCCAACATTGATTACAAAGCTTTGTAGGCTTGCAGGAGTTGAGTCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGCCCAAATAAAAGACCAATTAGATGAGGAAGAAAGAAGAAAGAAGAAGGAGGCCAAGAAAAAGCAGAGGGAAGAAGAAGAACAAGCTGCACTAGACTTTGCATC
TTCGTGCCTCAAAGACTTAGTGGATGCCACTGAGAAAGAAGAAGAAGAAGAGATTGCGCCCGCTTCTGAGGGCCAATCTAAAAGATATCAAATCCCACCACCACCACATG
AGGAAGAAAATGTGCTCGAGGACCTGTTCGAGCGTCTAAATGAAGCAATGTTCGAGGACTTGTTCGAACACGAGCAAGAAGAGGAGAAGAAGGCTCCTATTGTTGTGATG
AGGTCTTGGAGATCTCTAAGGACCAAATGCCCAAGAGGGGCAGAGAAGAAGATGATAGCGAGGCCGAAAGGAAGGCTAAAAAGAAGAAAAAGACTAACATTTTCCTCAGG
AGGCCAAGCACTGGGGGAGCGACTTCTGTGCTTCCTTGAGCCAAGACACCACCACCACCGCCTGCAAGGGGAGAACCCTCCATTCCTTGGCCAAAGAAGACTCCTACCAA
GAAGTCGAGAGTGGAAGTACGAGTGGAGTCCTATCCAGACACTCAGGCCCGCCTGGTATGGCTGGGATCGATTGATCAAGGAGCCAAAAGCAGCTTCTATCCCCTTGGTA
CGTGAATTCTATGCACAGATTGGGGAGGAAATGCAGACAACAATGCTCCTACGAGGCCGAGTGGTGGAGTTCTCGGTGAGACAAATCAATCAGGGAGTAAAGTGGCAAGA
GTCAAGGACAGGGATCCAGACTCTATTATCTGGAGATTTGAAGCTAGAAGCAGTGGTCTGGCTATATGTGATCAAGAACGGAATCATGCCAACAACGCATGACACTACCA
TCTCTCAGAAACGTGTCATGTTGTTGTACAACATGTACAAGGGGCTGGATCTCAACCTCGATCGAATCATTTGGACAAAGATCCTCTTCTGTGGACACAAGAACGTGGGA
AGGTTGTTCTTCCCAACATTGATTACAAAGCTTTGTAGGCTTGCAGGAGTTGAGTCAGAATAG
Protein sequenceShow/hide protein sequence
MYAQIKDQLDEEERRKKKEAKKKQREEEEQAALDFASSCLKDLVDATEKEEEEEIAPASEGQSKRYQIPPPPHEEENVLEDLFERLNEAMFEDLFEHEQEEEKKAPIVVM
RSWRSLRTKCPRGAEKKMIARPKGRLKRRKRLTFSSGGQALGERLLCFLEPRHHHHRLQGENPPFLGQRRLLPRSREWKYEWSPIQTLRPAWYGWDRLIKEPKAASIPLV
REFYAQIGEEMQTTMLLRGRVVEFSVRQINQGVKWQESRTGIQTLLSGDLKLEAVVWLYVIKNGIMPTTHDTTISQKRVMLLYNMYKGLDLNLDRIIWTKILFCGHKNVG
RLFFPTLITKLCRLAGVESE