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Spg007360 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007360
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA repair protein XRCC2 homolog isoform X2
Genome locationscaffold7:19803044..19805692
RNA-Seq ExpressionSpg007360
SyntenySpg007360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031741381.1 DNA repair protein XRCC2 homolog isoform X2 [Cucumis sativus]2.7e-0474.29Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG
        SFE     +TMHHKLQKERD LGVGLHLL+IDR+G
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG

XP_038891840.1 DNA repair protein XRCC2 homolog isoform X1 [Benincasa hispida]4.7e-0456.86Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G      +  +   LWG
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

XP_038891841.1 DNA repair protein XRCC2 homolog isoform X2 [Benincasa hispida]4.7e-0456.86Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G      +  +   LWG
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

XP_038891842.1 DNA repair protein XRCC2 homolog isoform X3 [Benincasa hispida]4.7e-0456.86Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G      +  +   LWG
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

XP_038891843.1 DNA repair protein XRCC2 homolog isoform X4 [Benincasa hispida]4.7e-0456.86Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G      +  +   LWG
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

TrEMBL top hitse value%identityAlignment
A0A1S3C3R7 DNA repair protein XRCC2 homolog isoform X15.0e-0474.29Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG

A0A1S3C456 DNA repair protein XRCC2 homolog isoform X35.0e-0474.29Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG

A0A1S3C491 DNA repair protein XRCC2 homolog isoform X25.0e-0474.29Show/hide
Query:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG
        SFE     +TMHHKLQKERDGLGVGLHLL+ID  G
Subjt:  SFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG

A0A6J1GYM0 DNA repair protein XRCC2 homolog isoform X22.9e-0458.33Show/hide
Query:  RAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        R F FQTMHHKLQKERD LG+ LHLLMID  G      +  +   LWG
Subjt:  RAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

A0A6J1K7N3 DNA repair protein XRCC2 homolog isoform X22.9e-0458.33Show/hide
Query:  RAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG
        R F FQTMHHKLQKERD LG+GL LLMID  G      +  +   LWG
Subjt:  RAFGFQTMHHKLQKERDGLGVGLHLLMIDRRG------KEGNETGLWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTATGGCAGGCTTTTTTTTTCCATCTTGTGAGACACTTGGCTTGAAAGGAATGGCAGAATCTTTAGAGGGGTGGAGAGATCTGGTGAGGAGCTTTGAGAGAGC
TTTTGGATTTCAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGGCCTTGGAGTTGGACTACATCTACTCATGATCGACAGGAGGGGTAAGGAGGGAAATGAGACTG
GGCTGTGGGGACCATTTGGATTGTGCCTCTGTGGTACGATCAGGGGAGTGTGTGCTTTTCCCAATGTTGACTTAATCAACATTCGAGTTAGTGTTCACAAAGGATTGGTG
TTTGCTCGAACCTTCATGCTGTGTGCCATACTTTGTAAGCATCTTCATTGGCGAGCTCATGCATTTGTGTTCGCCAACAGTCTCCACCAAAGGCTCATGTTTGTGTTCGT
TGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTATGGCAGGCTTTTTTTTTCCATCTTGTGAGACACTTGGCTTGAAAGGAATGGCAGAATCTTTAGAGGGGTGGAGAGATCTGGTGAGGAGCTTTGAGAGAGC
TTTTGGATTTCAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGGCCTTGGAGTTGGACTACATCTACTCATGATCGACAGGAGGGGTAAGGAGGGAAATGAGACTG
GGCTGTGGGGACCATTTGGATTGTGCCTCTGTGGTACGATCAGGGGAGTGTGTGCTTTTCCCAATGTTGACTTAATCAACATTCGAGTTAGTGTTCACAAAGGATTGGTG
TTTGCTCGAACCTTCATGCTGTGTGCCATACTTTGTAAGCATCTTCATTGGCGAGCTCATGCATTTGTGTTCGCCAACAGTCTCCACCAAAGGCTCATGTTTGTGTTCGT
TGAGTAG
Protein sequenceShow/hide protein sequence
MNPMAGFFFPSCETLGLKGMAESLEGWRDLVRSFERAFGFQTMHHKLQKERDGLGVGLHLLMIDRRGKEGNETGLWGPFGLCLCGTIRGVCAFPNVDLINIRVSVHKGLV
FARTFMLCAILCKHLHWRAHAFVFANSLHQRLMFVFVE