; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007385 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007385
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold7:20486030..20490820
RNA-Seq ExpressionSpg007385
SyntenySpg007385
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7025725.1 unnamed protein product [Microthlaspi erraticum]2.2e-0637.38Show/hide
Query:  KVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVD-
        +V +  H +L A+   MK A  +    +  ESDC+Q VKLI  E E W  + S +EE +     F   S   I R +N+ ++ +AK AR+  IC ++VD 
Subjt:  KVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVD-

Query:  SFPGWLV
        S P WLV
Subjt:  SFPGWLV

KAE8819066.1 Bidirectional sugar transporter SWEET14 [Hordeum vulgare]1.2e-0735.14Show/hide
Query:  VGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVDSF
        V N E  +  AI  G+ LA ++ C+ +EIESDCI +V+ I+   E  G    LV E  Q   +F+RI + H  R+ N ++DS+A+ +  +R    W +S 
Subjt:  VGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVDSF

Query:  PGWLVSLVEAD
        P ++  L   D
Subjt:  PGWLVSLVEAD

VAH65567.1 unnamed protein product [Triticum turgidum subsp. durum]3.8e-0629.92Show/hide
Query:  DYLKNFLEKNS----KVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIA
        DY  +F+   S     +   +  +L AI  G+ LA  + C+ IEIESDC  +V  + +  +  G   +++ E  Q   +F+ ISF H  R+ N ++D +A
Subjt:  DYLKNFLEKNS----KVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIA

Query:  KRARSNRICVAWVDSFPGWLVSLVEAD
        K   + R   +W D  P ++  L+  D
Subjt:  KRARSNRICVAWVDSFPGWLVSLVEAD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.6e-1528.52Show/hide
Query:  RTARNIWR--FSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKN-------------------
        + AR IWR  F  +     ED N S L+ W  +   L  + L   A+  W +WNDRN  IHG  V     +C+W   +L +                   
Subjt:  RTARNIWR--FSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKN-------------------

Query:  ---FLEKNSKVG--------------------NDEHPKLLA-------------------ILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVE
           +   +S V                      D    L+A                   ILEG+K A + +   +E+ESD + +++LI+ E+   G+ +
Subjt:  ---FLEKNSKVG--------------------NDEHPKLLA-------------------ILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVE

Query:  SLVEEIWQRGQEFSRISFSHISRKVNVISDSIAK-RARSNRICVAWVDSFPGWLVSLVEADRVS-FAHVA
        + V EI      F+ ISFSH SR+ N  +  +AK    S     AW+ +FP WL+ LV+ D  S FAHVA
Subjt:  SLVEEIWQRGQEFSRISFSHISRKVNVISDSIAK-RARSNRICVAWVDSFPGWLVSLVEADRVS-FAHVA

XP_022553113.1 uncharacterized protein LOC111203536 [Brassica napus]6.9e-0825.48Show/hide
Query:  KESDDRPNFIDETGN--WNLEKLSEGVLSDDCEIIRRIPINRS-LEDKYIWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEK------L
        ++ D R + + + GN  WNL+ L+E +  +D   I  I ++R+ L D Y W + ++  N  +            + S++ R L+     PLE+      L
Subjt:  KESDDRPNFIDETGN--WNLEKLSEGVLSDDCEIIRRIPINRS-LEDKYIWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEK------L

Query:  EQVAVISWTLWNDRNKSI--HGDPVPIENVRC------KWCL-----DYLKNFLEK-----------------------NSKVGNDEH------------
        + +  I W +W  +N+ I  + D  P+E ++        W L     + ++N +E+                        S + NDE             
Subjt:  EQVAVISWTLWNDRNKSI--HGDPVPIENVRC------KWCL-----DYLKNFLEK-----------------------NSKVGNDEH------------

Query:  PKLLAILEGMKLAKSLSCDI-----------------IEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARS
        P L A  E  ++  SL  +                  ++ E DC Q VKLI+ E E W  + + V+EI      F  IS  HI R  NV +DS+AK  RS
Subjt:  PKLLAILEGMKLAKSLSCDI-----------------IEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARS

Query:  NRICVAWVDS
          I   +VDS
Subjt:  NRICVAWVDS

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.3e-1528.52Show/hide
Query:  RTARNIWR--FSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKN-------------------
        + AR IWR  F  +     ED N S L+ W  +   L  + L   A+  W +WNDRN  IHG  V     +C+W   +L +                   
Subjt:  RTARNIWR--FSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKN-------------------

Query:  ---FLEKNSKVG--------------------NDEHPKLLA-------------------ILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVE
           +   +S V                      D    L+A                   ILEG+K A + +   +E+ESD + +++LI+ E+   G+ +
Subjt:  ---FLEKNSKVG--------------------NDEHPKLLA-------------------ILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVE

Query:  SLVEEIWQRGQEFSRISFSHISRKVNVISDSIAK-RARSNRICVAWVDSFPGWLVSLVEADRVS-FAHVA
        + V EI      F+ ISFSH SR+ N  +  +AK    S     AW+ +FP WL+ LV+ D  S FAHVA
Subjt:  SLVEEIWQRGQEFSRISFSHISRKVNVISDSIAK-RARSNRICVAWVDSFPGWLVSLVEADRVS-FAHVA

A0A803P3X4 Uncharacterized protein1.5e-0822.92Show/hide
Query:  KLSEGVLSDDCEIIRR-IPI----NRSLEDKY------IWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKS
        KL+   L  +  + RR IP+    NR     Y      IW   R  R +W+ +G    ++   +   L   ++I + L  E+ E   V+SW LW  RN  
Subjt:  KLSEGVLSDDCEIIRR-IPI----NRSLEDKY------IWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKS

Query:  IHGDPVPIENVRCKWCLDYLKNFLEKN---------------------------------------SKVGNDE-------------------HPKLLAIL
         HG   P      +WC  +L  F E N                                       S V  D                    H +L AI 
Subjt:  IHGDPVPIENVRCKWCLDYLKNFLEKN---------------------------------------SKVGNDE-------------------HPKLLAIL

Query:  EGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVDSFP
         G++     +     +ESDC+Q+V L++R+ E   +V+ +V  I    Q       S + R+ N ++  +A  A  N+    W+   P
Subjt:  EGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVDSFP

A0A803Q154 Uncharacterized protein3.0e-0922.02Show/hide
Query:  ARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNFLEKNSK----------------
        ++ +W+  G+   + +  +N  L  + ++         + + V+SW LW+ RNK +HG   P      +WC  Y+++F +                    
Subjt:  ARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNFLEKNSK----------------

Query:  -------VGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRIC
               VG+    +L+AI EG+            +++DC+Q+V+L++ E     E + L+ EI +  Q  S      + R+VNV++  +A  A  N++ 
Subjt:  -------VGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRIC

Query:  VAWVDSFPGWLVSLVEAD
          W+   P      ++ D
Subjt:  VAWVDSFPGWLVSLVEAD

A0A803Q1K6 Uncharacterized protein5.7e-0820.81Show/hide
Query:  RTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNFLE------------------
        + ++  WR SG+   L+       L   ++I +    EKLE   ++SW +WN RN  +HG   P      +WC ++L  F                    
Subjt:  RTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNFLE------------------

Query:  ----------------KNSKVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVIS
                        KNS +G +     +AI +G+++          +++DC+Q+V LI+ +     +++ L+ +I       + +  S + R+ N ++
Subjt:  ----------------KNSKVGNDEHPKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVIS

Query:  DSIAKRARSNRICVAWVDSFP
         ++A  A  ++    W+   P
Subjt:  DSIAKRARSNRICVAWVDSFP

A0A803QEN0 Uncharacterized protein9.4e-1125.39Show/hide
Query:  IIRRIPINRSLEDKYIWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNF
        I+R +  +  +EDK +WHY R ++ +W+  G+   +++  +N  L  + +I         E + V+SW LW+ RN  IHG+ +P      +WC +Y+++F
Subjt:  IIRRIPINRSLEDKYIWHYDRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNF

Query:  LE-----------KNSKVGNDEH-------------------PKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEI
         +               V  D                      +L+AI E +K A      + E+ SDC+Q+V LI        + + L+ EI
Subjt:  LE-----------KNSKVGNDEH-------------------PKLLAILEGMKLAKSLSCDIIEIESDCIQSVKLIKRELEIWGEVESLVEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAATATGTACACCTTCAGTGGCCGAATAGGTCATATAATGAAAGAATGTGAGGAGCAGTTTCAAGGAGAATCATCTGGCACGAAGAAATATAAGTTTGGGAATTG
GCTCAAATTTCAAGGTTTTTTCAGTCAATACAAAAAACCAGAATCACCCCCTTTTGAAGAGGAACATACGAAAGAAAATAAATCTGAAGAAGTGAAAGATGATAGAGAGA
GGAATGAAGAAGATAAAGTCTTTCCTGAAATCGACAGCCAAAATATGGAGATACCAAGCGAAGAGGAGGAAAATATTCTTGAATTTCTAGAAGTGGAAAACAGAAGAGAG
CCACTGCAAATCATACCAAAAAACAAGAGAGACAAAGGCCCCATTGAGCAAATGGAACCAATGAGCGATGGCTTAGATGGAAAAGAAGAAATCAGTATTGAGGGGAATGA
CAGTGATTCTAAAATCCAGCAAGCTTCAAAGAGAAAGAGGAAAAGTTGGAAAAGACTGGATAAAGAAGCCAAAGAAAGTGATGATAGACCAAATTTTATCGATGAAACAG
GGAATTGGAACCTTGAGAAACTCTCTGAAGGGGTTTTGAGTGACGACTGTGAAATAATTAGAAGAATCCCTATTAATAGAAGCCTAGAGGATAAATATATTTGGCACTAC
GATCGTACAGCTAGGAATATTTGGAGATTTTCAGGCATTGATGTGTACCTTGAAGAGGATTTTAACAATAGTGCCCTAGACAGATGGCTGAAGATTTTTTCCAGTTTGCC
TTTGGAGAAGCTCGAACAAGTTGCAGTGATTAGCTGGACTTTATGGAATGACAGAAATAAATCAATTCACGGAGATCCAGTCCCAATTGAAAATGTTCGATGCAAATGGT
GTTTAGATTACCTGAAGAATTTTCTGGAGAAGAACTCTAAAGTTGGAAATGATGAGCACCCCAAATTATTAGCAATCCTCGAAGGAATGAAGCTGGCGAAGTCTCTGAGT
TGTGATATAATTGAGATTGAATCTGATTGTATTCAGTCGGTCAAGTTGATTAAAAGAGAGCTGGAGATTTGGGGTGAGGTGGAATCTTTAGTGGAGGAAATTTGGCAACG
TGGCCAGGAGTTTTCAAGAATTTCTTTTTCTCATATCTCTAGGAAAGTCAATGTAATATCAGATAGTATTGCTAAAAGAGCCAGATCGAATAGAATTTGTGTAGCCTGGG
TTGATTCGTTCCCGGGTTGGCTTGTATCCTTGGTCGAAGCAGACCGTGTTTCTTTTGCCCATGTGGCGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAATATGTACACCTTCAGTGGCCGAATAGGTCATATAATGAAAGAATGTGAGGAGCAGTTTCAAGGAGAATCATCTGGCACGAAGAAATATAAGTTTGGGAATTG
GCTCAAATTTCAAGGTTTTTTCAGTCAATACAAAAAACCAGAATCACCCCCTTTTGAAGAGGAACATACGAAAGAAAATAAATCTGAAGAAGTGAAAGATGATAGAGAGA
GGAATGAAGAAGATAAAGTCTTTCCTGAAATCGACAGCCAAAATATGGAGATACCAAGCGAAGAGGAGGAAAATATTCTTGAATTTCTAGAAGTGGAAAACAGAAGAGAG
CCACTGCAAATCATACCAAAAAACAAGAGAGACAAAGGCCCCATTGAGCAAATGGAACCAATGAGCGATGGCTTAGATGGAAAAGAAGAAATCAGTATTGAGGGGAATGA
CAGTGATTCTAAAATCCAGCAAGCTTCAAAGAGAAAGAGGAAAAGTTGGAAAAGACTGGATAAAGAAGCCAAAGAAAGTGATGATAGACCAAATTTTATCGATGAAACAG
GGAATTGGAACCTTGAGAAACTCTCTGAAGGGGTTTTGAGTGACGACTGTGAAATAATTAGAAGAATCCCTATTAATAGAAGCCTAGAGGATAAATATATTTGGCACTAC
GATCGTACAGCTAGGAATATTTGGAGATTTTCAGGCATTGATGTGTACCTTGAAGAGGATTTTAACAATAGTGCCCTAGACAGATGGCTGAAGATTTTTTCCAGTTTGCC
TTTGGAGAAGCTCGAACAAGTTGCAGTGATTAGCTGGACTTTATGGAATGACAGAAATAAATCAATTCACGGAGATCCAGTCCCAATTGAAAATGTTCGATGCAAATGGT
GTTTAGATTACCTGAAGAATTTTCTGGAGAAGAACTCTAAAGTTGGAAATGATGAGCACCCCAAATTATTAGCAATCCTCGAAGGAATGAAGCTGGCGAAGTCTCTGAGT
TGTGATATAATTGAGATTGAATCTGATTGTATTCAGTCGGTCAAGTTGATTAAAAGAGAGCTGGAGATTTGGGGTGAGGTGGAATCTTTAGTGGAGGAAATTTGGCAACG
TGGCCAGGAGTTTTCAAGAATTTCTTTTTCTCATATCTCTAGGAAAGTCAATGTAATATCAGATAGTATTGCTAAAAGAGCCAGATCGAATAGAATTTGTGTAGCCTGGG
TTGATTCGTTCCCGGGTTGGCTTGTATCCTTGGTCGAAGCAGACCGTGTTTCTTTTGCCCATGTGGCGCAATAA
Protein sequenceShow/hide protein sequence
MCNMYTFSGRIGHIMKECEEQFQGESSGTKKYKFGNWLKFQGFFSQYKKPESPPFEEEHTKENKSEEVKDDRERNEEDKVFPEIDSQNMEIPSEEEENILEFLEVENRRE
PLQIIPKNKRDKGPIEQMEPMSDGLDGKEEISIEGNDSDSKIQQASKRKRKSWKRLDKEAKESDDRPNFIDETGNWNLEKLSEGVLSDDCEIIRRIPINRSLEDKYIWHY
DRTARNIWRFSGIDVYLEEDFNNSALDRWLKIFSSLPLEKLEQVAVISWTLWNDRNKSIHGDPVPIENVRCKWCLDYLKNFLEKNSKVGNDEHPKLLAILEGMKLAKSLS
CDIIEIESDCIQSVKLIKRELEIWGEVESLVEEIWQRGQEFSRISFSHISRKVNVISDSIAKRARSNRICVAWVDSFPGWLVSLVEADRVSFAHVAQ