CuGenDBv2

Gene ID	Spg007399
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ran guanine nucleotide release factor
Genome location	scaffold7:19907548..19908540
RNA-Seq Expression	Spg007399
Synteny	Spg007399
Gene Ontology terms	GO:0006606 - protein import into nucleus (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005634 - nucleus (cellular component) GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR007681 - Ran-interacting Mog1 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601426.1 putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. sororia]

5.9e-13

87.23

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGLATPASQSGCMPM EVFKLA SSFKV DWS+FG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

KAG7032209.1 putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-13

87.23

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGLATPASQSGCMPM EVFKLA SSFKV DWS+FG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

XP_022987588.1 probable ran guanine nucleotide release factor [Cucurbita maxima]

1.7e-12

85.11

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGLATPASQSGC+PM EVFKLA SSFKV DWS+FG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

XP_023552843.1 probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo]

4.5e-13

89.36

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGLATPASQSGCMPM EVFKLA SSFKV DWSIFG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

XP_038892350.1 ran guanine nucleotide release factor [Benincasa hispida]

1.8e-14

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA
        + PLSESASSVGSGLATPASQSGCMPM+EVFKLA SSFKVYDWS+FG  A
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU01 Uncharacterized protein

1.4e-12

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA
        + PLSESASSVGSGLATPAS SG MPM EVFKLA SSFKV DWS+FG PA
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

A0A5B7BH72 Putative ran guanine nucleotide release factor

4.1e-12

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA
        + PLSESAS+VG+GLA PA+QSGCMPM+EVFKLA SSFKV DWS+FG  A
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

A0A5J5AGX1 Uncharacterized protein

4.1e-12

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA
        + PLSESAS+VG+GLA PA+QSGCMPM+EVFKLA SSFKV DWS+FG  A
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

A0A6J1GZ86 probable ran guanine nucleotide release factor

8.3e-13

85.11

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGL TPASQSGCMPM EVFKLA SSFKV DWS+FG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

A0A6J1JJW2 probable ran guanine nucleotide release factor

8.3e-13

85.11

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG
        + PLSESASSVGSGLATPASQSGC+PM EVFKLA SSFKV DWS+FG
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69680.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

2.6e-11

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Query:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA
        + PLSESA +VGSGLA PASQSG MPM ++ K + S+FKV DW++FG  A
Subjt:  VGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

Sequences

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CDS sequence

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ATGTTAATAGCCAGACTAACTCTTAAGGTCTCTTCTGGTGCAAGTACAGGAAAACATAATTTTGATAAACTAGAGAAACTGCATATTGAGATGGATTCTGAAAGGACAGT
TTACTGTTTCAATCATTTTGTAGGTCCTCTGAGCGAAAGTGCTAGCTCAGTTGGCTCTGGTTTGGCCACTCCTGCTTCACAATCCGGATGCATGCCAATGTCTGAGGTAT
TCAAACTTGCAGCCTCCAGCTTTAAAGTCTATGACTGGAGCATTTTCGGCCTGCCAGCCTAA

mRNA sequence

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Protein sequence

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MLIARLTLKVSSGASTGKHNFDKLEKLHIEMDSERTVYCFNHFVGPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSIFGLPA

Spg007399 (gene) of Sponge gourd (cylindrica) v1 genome