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Spg007402 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007402
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationscaffold7:19732662..19733144
RNA-Seq ExpressionSpg007402
SyntenySpg007402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033326.1 MuDRA-like transposase [Cucumis melo var. makuwa]7.3e-0538.46Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADH
        +Q    CI+ RI P+ + +++ LT+Y NG N  N+IRI DD+ V+W M  ++    +D+ VV D+
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADH

KAA0042312.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.7e-0639.44Show/hide
Query:  LVYVIYQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA
        LV   +Q F  CI+ R+ P+ D +++RLT+Y  G N L +I+I DD+DV+W M  ++   ++D+ +V D A
Subjt:  LVYVIYQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA

KAA0047392.1 uncharacterized protein E6C27_scaffold754G00490 [Cucumis melo var. makuwa]3.3e-0537.5Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD
        +Q F  CI+ R+ P+ + +++RLT+Y    N  N+IRI DD+DV+W M  ++    +D+ VV +
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD

KAA0066503.1 uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa]5.0e-0637.88Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA
        +Q F  CI  R+ P+ + +++RLT+Y    N L +IRI DD+DV+W M  ++   ++D+ +V D A
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA

TYK14069.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]3.3e-0537.5Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD
        +Q F  CI+ R+ P+ + +++RLT+Y    N  N+IRI DD+DV+W M  ++    +D+ VV +
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD

TrEMBL top hitse value%identityAlignment
A0A5A7TFW2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like8.4e-0739.44Show/hide
Query:  LVYVIYQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA
        LV   +Q F  CI+ R+ P+ D +++RLT+Y  G N L +I+I DD+DV+W M  ++   ++D+ +V D A
Subjt:  LVYVIYQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA

A0A5A7TVA6 Uncharacterized protein1.6e-0537.5Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD
        +Q F  CI+ R+ P+ + +++RLT+Y    N  N+IRI DD+DV+W M  ++    +D+ VV +
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD

A0A5A7VEN5 Uncharacterized protein2.4e-0637.88Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA
        +Q F  CI  R+ P+ + +++RLT+Y    N L +IRI DD+DV+W M  ++   ++D+ +V D A
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHA

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.6e-0537.5Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD
        +Q F  CI+ R+ P+ + +++RLT+Y    N  N+IRI DD+DV+W M  ++    +D+ VV +
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVAD

A0A5D3DDR3 MuDRA-like transposase3.5e-0538.46Show/hide
Query:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADH
        +Q    CI+ RI P+ + +++ LT+Y NG N  N+IRI DD+ V+W M  ++    +D+ VV D+
Subjt:  YQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCACTGGATGGACATTAATGAGCCTAGTTTACGTCATATACCAGGGTTTTACTGAATGCATTCGGAGTAGGATTTCCCCGTCCGACGATTACACAATCACTCGGCTAAC
TATGTACAGAAATGGAGTCAACAAATTGAACATAATTCGGATTACCGACGATAGGGATGTTGCATGGTTCATGTCGAACGTCACTAGTGGTGTGTCTAGCGATATTTGTG
TGGTTGCTGACCATGCAGGGGGTGATGCCCAGATTGTTACTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATCACTGGATGGACATTAATGAGCCTAGTTTACGTCATATACCAGGGTTTTACTGAATGCATTCGGAGTAGGATTTCCCCGTCCGACGATTACACAATCACTCGGCTAAC
TATGTACAGAAATGGAGTCAACAAATTGAACATAATTCGGATTACCGACGATAGGGATGTTGCATGGTTCATGTCGAACGTCACTAGTGGTGTGTCTAGCGATATTTGTG
TGGTTGCTGACCATGCAGGGGGTGATGCCCAGATTGTTACTTCATAG
Protein sequenceShow/hide protein sequence
ITGWTLMSLVYVIYQGFTECIRSRISPSDDYTITRLTMYRNGVNKLNIIRITDDRDVAWFMSNVTSGVSSDICVVADHAGGDAQIVTS