; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007476 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007476
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationscaffold2:1693280..1693744
RNA-Seq ExpressionSpg007476
SyntenySpg007476
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589746.1 hypothetical protein SDJN03_15169, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3071.86Show/hide
Query:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSYA----G
        R IAVLC VVCMSAIES GR+ RKDLGL+LGG+G+GLG+GLGLGLGGGSGSGSGSGSGSGSGSGS SSS   SSSSS GGSGAGSE GSYAGSYA    G
Subjt:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSYA----G

Query:  SGSGRNDRN---------------NGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN
        S SGRN RN                GG G G GYGEG G G G G EGYGEGRGYGEGR Y EGGNN
Subjt:  SGSGRNDRN---------------NGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN

XP_004146660.2 glycine-rich cell wall structural protein 2 [Cucumis sativus]5.9e-2672.78Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY
        MASI+   I V+CL++  SAI S GR+ RKDLG++LGG+G+GLG G+GLG+ GGSGSGSGSGSGSGSGSGSSSSSSSYSSSSS+ GSGAGSE GSYAGSY
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY

Query:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGGGG--GGEGYGEGRGYGEGRCYREGGNN
        AGS  GSG     NGGSG GSGYG GSGRGGG    GEGYGEG GYGEGR Y  GG N
Subjt:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGGGG--GGEGYGEGRGYGEGRCYREGGNN

XP_022135257.1 glycine-rich cell wall structural protein 2-like [Momordica charantia]1.0e-3077.07Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY
        MASI  R IA +C VVC  AIES  R+ RKDLGL+LGG+GIGLG G+GLG+GGGSGSG+G+GSGSGSGSGS SSSSS+SSSSS GGSGAGSE GSYAGS 
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY

Query:  A--GSGSGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCY-REGGNN
        A  GSGSGRN R NGGSGSGSGYGEGSGR   G GEGYGEG GYGEGR Y  EGGNN
Subjt:  A--GSGSGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCY-REGGNN

XP_022921885.1 glycine-rich protein DOT1-like [Cucurbita moschata]4.1e-2772.67Show/hide
Query:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSS--SSSYSSSSSNGGSGAGSEVGSYAGSYAGSG
        R IAVLC VVCMSAIES GR+ RKDLGL+LGG+G+GLG+GLGLGLGGGSGSGSGSGSGSGSGSGS S   SSS SSSSS GGSGAGSE GSYAGSYAGS 
Subjt:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSS--SSSYSSSSSNGGSGAGSEVGSYAGSYAGSG

Query:  SGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN
                GGS SG  Y          GG GYGEGRGYGEGR Y EGGNN
Subjt:  SGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN

XP_023515820.1 putative glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]2.1e-3175.47Show/hide
Query:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSYA----G
        R IAVLC VVCMSAIES GR+ RKDLGL+LGG+G+GLG+GLGLGLGGGSGSGSGSGSGSGSGSGS SSS   SSSSS GGSGAGSE GSYAGSYA    G
Subjt:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSYA----G

Query:  SGSGRNDRN-------NGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN
        S SGRN RN        GG G G GYGEG G G G G EGYGEGRGYGEGR Y EGGNN
Subjt:  SGSGRNDRN-------NGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN

TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein2.9e-2672.78Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY
        MASI+   I V+CL++  SAI S GR+ RKDLG++LGG+G+GLG G+GLG+ GGSGSGSGSGSGSGSGSGSSSSSSSYSSSSS+ GSGAGSE GSYAGSY
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY

Query:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGGGG--GGEGYGEGRGYGEGRCYREGGNN
        AGS  GSG     NGGSG GSGYG GSGRGGG    GEGYGEG GYGEGR Y  GG N
Subjt:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGGGG--GGEGYGEGRGYGEGRCYREGGNN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like1.6e-2470.7Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY
        MASI+   + V+CL++  S   S GR+ RKDLG++LGG+G+GLG G+GLG+ GGSGSGSGSGSGSGSGSGSSSSSSSYSSSSS+ GSGAGSE GSYAGSY
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY

Query:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGG-GGGGEGYGEGRGYGEGRCYREGGNN
        AGS  GSG     NGGSG GSGYG GSGRGG  G GEGYGEG GYGEG  Y  GG N
Subjt:  AGS--GSGRNDRNNGGSGSGSGYGEGSGRGG-GGGGEGYGEGRGYGEGRCYREGGNN

A0A6J1C269 glycine-rich cell wall structural protein 2-like5.0e-3177.07Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY
        MASI  R IA +C VVC  AIES  R+ RKDLGL+LGG+GIGLG G+GLG+GGGSGSG+G+GSGSGSGSGS SSSSS+SSSSS GGSGAGSE GSYAGS 
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSY

Query:  A--GSGSGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCY-REGGNN
        A  GSGSGRN R NGGSGSGSGYGEGSGR   G GEGYGEG GYGEGR Y  EGGNN
Subjt:  A--GSGSGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCY-REGGNN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X35.4e-2572.44Show/hide
Query:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGG-GSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGS
        MASI    + V+C ++  S I S  R+ RKDLGL+LGG+G+G+G G+GLGLGG GSGSGSGSGSGSGSGS SSSSSSSYSSSS + GSGAGSE GSYAGS
Subjt:  MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGG-GSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGS

Query:  YAGSGSGRNDRNNGGSGSGSGYGEGSGRG-GGGGGEGYGEGRGYGEGRCYREGGNN
         AGSGSG N   NGGSGSGSGYG GSGRG G GGGEGYGEG GYGEGR Y  GG N
Subjt:  YAGSGSGRNDRNNGGSGSGSGYGEGSGRG-GGGGGEGYGEGRGYGEGRCYREGGNN

A0A6J1E720 glycine-rich protein DOT1-like2.0e-2772.67Show/hide
Query:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSS--SSSYSSSSSNGGSGAGSEVGSYAGSYAGSG
        R IAVLC VVCMSAIES GR+ RKDLGL+LGG+G+GLG+GLGLGLGGGSGSGSGSGSGSGSGSGS S   SSS SSSSS GGSGAGSE GSYAGSYAGS 
Subjt:  RDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSS--SSSYSSSSSNGGSGAGSEVGSYAGSYAGSG

Query:  SGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN
                GGS SG  Y          GG GYGEGRGYGEGR Y EGGNN
Subjt:  SGRNDRNNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein1.1e-1470.41Show/hide
Query:  VLCLVVCMSAIE-SHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNG-GSGAGSEVGSYAGSYAGSGSG
        +L LVV  S +  +  R+ RKDLG++LGGIGIGLG+GLG+GLGGGSGSG+G+GSGSGSGS SSSSSSS SSSSS+G G  AGS  GS+AGS AGSGSG
Subjt:  VLCLVVCMSAIE-SHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNG-GSGAGSEVGSYAGSYAGSGSG

AT4G30460.1 glycine-rich protein5.7e-1962.16Show/hide
Query:  IAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSG--AGSEVGSYAGSYAG----
        + ++ L++  S + S  R+ RKDLGL+LGGIG G+GIG+G+G GGGSGSG+G+GSGSG G  SSSSSSS SSSSS+GG G  AGSE GSYAGS+AG    
Subjt:  IAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSG--AGSEVGSYAGSYAG----

Query:  --SGSGRNDRNNGGSGSGSGYGEGSGRGGGGG---GEGYGEGRGYGEG
          SGSGR   + GG G G G G G GRGGGGG   GEGYGEG GYG G
Subjt:  --SGSGRNDRNNGGSGSGSGYGEGSGRGGGGG---GEGYGEGRGYGEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCATCAGATTCAGGGATATTGCTGTTCTTTGTTTGGTAGTGTGTATGTCTGCGATTGAATCACACGGCCGAATCATGAGGAAGGACTTGGGCCTTAATCTTGG
AGGTATTGGAATTGGCCTTGGTATTGGCTTGGGCTTGGGCTTGGGCGGAGGAAGTGGCTCGGGTTCTGGGTCCGGCTCTGGATCCGGGTCCGGTTCCGGGTCGAGTTCAT
CTTCGTCATCATACTCGTCGAGCTCTAGCAATGGGGGCTCCGGAGCAGGCTCCGAAGTTGGTTCCTACGCTGGCTCTTACGCTGGGTCAGGTTCGGGAAGGAATGACAGG
AATAACGGTGGTTCGGGGTCAGGCTCGGGATACGGCGAGGGTTCCGGCAGAGGAGGCGGCGGCGGTGGAGAAGGTTATGGTGAGGGTCGTGGCTACGGCGAGGGACGTTG
TTACCGCGAAGGCGGTAACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCATCAGATTCAGGGATATTGCTGTTCTTTGTTTGGTAGTGTGTATGTCTGCGATTGAATCACACGGCCGAATCATGAGGAAGGACTTGGGCCTTAATCTTGG
AGGTATTGGAATTGGCCTTGGTATTGGCTTGGGCTTGGGCTTGGGCGGAGGAAGTGGCTCGGGTTCTGGGTCCGGCTCTGGATCCGGGTCCGGTTCCGGGTCGAGTTCAT
CTTCGTCATCATACTCGTCGAGCTCTAGCAATGGGGGCTCCGGAGCAGGCTCCGAAGTTGGTTCCTACGCTGGCTCTTACGCTGGGTCAGGTTCGGGAAGGAATGACAGG
AATAACGGTGGTTCGGGGTCAGGCTCGGGATACGGCGAGGGTTCCGGCAGAGGAGGCGGCGGCGGTGGAGAAGGTTATGGTGAGGGTCGTGGCTACGGCGAGGGACGTTG
TTACCGCGAAGGCGGTAACAATTGA
Protein sequenceShow/hide protein sequence
MASIRFRDIAVLCLVVCMSAIESHGRIMRKDLGLNLGGIGIGLGIGLGLGLGGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSNGGSGAGSEVGSYAGSYAGSGSGRNDR
NNGGSGSGSGYGEGSGRGGGGGGEGYGEGRGYGEGRCYREGGNN