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Spg007485 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007485
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationscaffold2:1695722..1696159
RNA-Seq ExpressionSpg007485
SyntenySpg007485
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589745.1 hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3779.39Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY----------
        MASI SL VVCFLLSFS +VS+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGS SSSSSSS S SS SGSGAGSEAGSY          
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY----------

Query:  ------AGSYAGSRAGSGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
              AGSYAGSRAGSGSGRNRNG    GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  ------AGSYAGSRAGSGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_004146660.2 glycine-rich cell wall structural protein 2 [Cucumis sativus]7.5e-3986.93Show/hide
Query:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA VVC LLSFSA++SEGRVARKDLGIDLGG+GVGLG GIGLG+GGSGSGSGSGSGSGSGS SSSSSSSY  SSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGYGEGSGRGSGNGG-----GEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNGGSGYG G G GSG GG     GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGRNRNGGSGYGEGSGRGSGNGG-----GEGYGEGHGYGEGRGYGGGN

XP_008443813.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.3e-3887.5Show/hide
Query:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA VVC LLSFS  +SEGRVARKDLGIDLGGLGVGLGAGIGLG+GGSGSGSGSGSGSGSGS SSSSSSSY  SSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGYGE----GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNGGSGYG     GSGRG  NG GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGRNRNGGSGYGE----GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]2.4e-3784.56Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG
        MASI SL VVCFLLSFS ++S+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGS SSSSSSS S SS SG+GS AGS AGSYAGSRAG
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG

Query:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSG NRNG    GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_023515819.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]2.8e-3885.91Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG
        MASI SL VVCFLLSFSA+VS+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGS SSSSSSS S SS SG+GS AGS AGSYAGSRAG
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG

Query:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        S SGRNRNG    GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein3.6e-3986.93Show/hide
Query:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA VVC LLSFSA++SEGRVARKDLGIDLGG+GVGLG GIGLG+GGSGSGSGSGSGSGSGS SSSSSSSY  SSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGYGEGSGRGSGNGG-----GEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNGGSGYG G G GSG GG     GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGRNRNGGSGYGEGSGRGSGNGG-----GEGYGEGHGYGEGRGYGGGN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like6.2e-3987.5Show/hide
Query:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA VVC LLSFS  +SEGRVARKDLGIDLGGLGVGLGAGIGLG+GGSGSGSGSGSGSGSGS SSSSSSSY  SSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLA-VVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSY--SSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGYGE----GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNGGSGYG     GSGRG  NG GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGRNRNGGSGYGE----GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E2L1 cell wall protein IFF6-like isoform X11.3e-3678.7Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLG--GSGSGSGSGSGSGSGSSSSSSSSSYSSS--SGSGAGSEAGSY------
        MASI SL VVCFLLSFS ++S+ RVARKDLG+DLGGLGVG+G GIGLGLG  GSGSGSGSGSGSGSGSSSSSSSSSYSSS  SGSGAGSEAGSY      
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLG--GSGSGSGSGSGSGSGSSSSSSSSSYSSS--SGSGAGSEAGSY------

Query:  ----------AGSYAGSRAGSGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
                  AGSYAGSRAGSGSG NRNG    GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  ----------AGSYAGSRAGSGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X31.2e-3784.56Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG
        MASI SL VVCFLLSFS ++S+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGS SSSSSSS S SS SG+GS AGS AGSYAGSRAG
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG

Query:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSG NRNG    GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGRNRNG----GSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1JK06 putative glycine-rich cell wall structural protein 1 isoform X26.2e-3177.24Show/hide
Query:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG
        MAS  +L V+CFLLSFSA+VS+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGSSSSSSS S SSSSGSGAGSE    AGSYAGSRAG
Subjt:  MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAG

Query:  SGSGRNRNGGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SGSGRNRN                GGEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGRNRNGGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein1.9e-1672.04Show/hide
Query:  LLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGL-GGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGSG
        ++S   +++E R+ARKDLGIDLGG+G+GLG G+G+GL GGSGSG+G+GSGSGSGS SSSSSSS SSSS SG+G  AGS AGS+AGSRAGSGSG
Subjt:  LLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGL-GGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein4.7e-2365.54Show/hide
Query:  SLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG-----AGSEAGSYAGSYAGS---
        SL ++  +L+ S +VSE RVARKDLG+DLGG+G G+G GIG+G GGSGSG+G+GSGSG G SSSSSSSS SSSS SG     AGSEAGSYAGS+AGS   
Subjt:  SLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG-----AGSEAGSYAGSYAGS---

Query:  -RAGSGSGRNRNGGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGG
         R+GSG GR   GG G+G G G G G GGG G G G GYGEG GYGGG
Subjt:  -RAGSGSGRNRNGGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCAAGTCCCTTGCCGTTGTTTGTTTTTTACTCTCTTTCTCCGCCGTTGTCTCTGAAGGCCGTGTGGCCAGGAAGGATCTCGGCATTGACCTTGGAGGACT
CGGAGTTGGACTCGGAGCTGGAATAGGCTTGGGCTTAGGTGGAAGTGGGTCGGGATCGGGGTCCGGGTCCGGATCCGGATCTGGGTCGAGTTCATCTTCTTCTTCATCAT
CATACTCCTCGAGCTCCGGGTCCGGAGCTGGGTCCGAAGCAGGTTCCTACGCTGGTTCGTACGCAGGGTCTCGGGCAGGCTCAGGTTCGGGTAGGAACAGGAATGGAGGT
TCGGGTTACGGCGAAGGTTCGGGCAGAGGAAGCGGCAACGGTGGCGGTGAAGGATACGGCGAAGGTCATGGATACGGCGAGGGCCGTGGTTATGGCGGAGGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATCAAGTCCCTTGCCGTTGTTTGTTTTTTACTCTCTTTCTCCGCCGTTGTCTCTGAAGGCCGTGTGGCCAGGAAGGATCTCGGCATTGACCTTGGAGGACT
CGGAGTTGGACTCGGAGCTGGAATAGGCTTGGGCTTAGGTGGAAGTGGGTCGGGATCGGGGTCCGGGTCCGGATCCGGATCTGGGTCGAGTTCATCTTCTTCTTCATCAT
CATACTCCTCGAGCTCCGGGTCCGGAGCTGGGTCCGAAGCAGGTTCCTACGCTGGTTCGTACGCAGGGTCTCGGGCAGGCTCAGGTTCGGGTAGGAACAGGAATGGAGGT
TCGGGTTACGGCGAAGGTTCGGGCAGAGGAAGCGGCAACGGTGGCGGTGAAGGATACGGCGAAGGTCATGGATACGGCGAGGGCCGTGGTTATGGCGGAGGCAACTGA
Protein sequenceShow/hide protein sequence
MASIKSLAVVCFLLSFSAVVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGSGRNRNGG
SGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN