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Spg007532 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007532
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionphosphatase-related
Genome locationscaffold2:1945744..1949312
RNA-Seq ExpressionSpg007532
SyntenySpg007532
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q0JL44 Protein SGT1 homolog2.6e-0480.77Show/hide
Query:  YLQAIADANKAIELDPSNSKAYLRKG
        Y +A+ADANKAIELDPS  KAYLRKG
Subjt:  YLQAIADANKAIELDPSNSKAYLRKG
Q9SUR9 Protein SGT1 homolog A5.8e-0476.92Show/hide
Query:  YLQAIADANKAIELDPSNSKAYLRKG
        + +A+ADANKAIELDPS +KAYLRKG
Subjt:  YLQAIADANKAIELDPSNSKAYLRKG
Arabidopsis top hitse value%identityAlignment
AT4G11260.1 phosphatase-related7.8e-0465.38Show/hide
Query:  YLQAIADANKAIELDPSNSKAYLRKG
        + +A+ DANKAIEL+P+ +KAYLRKG
Subjt:  YLQAIADANKAIELDPSNSKAYLRKG
AT4G23570.1 phosphatase-related4.1e-0576.92Show/hide
Query:  YLQAIADANKAIELDPSNSKAYLRKG
        + +A+ADANKAIELDPS +KAYLRKG
Subjt:  YLQAIADANKAIELDPSNSKAYLRKG
AT4G23570.2 phosphatase-related4.1e-0576.92Show/hide
Query:  YLQAIADANKAIELDPSNSKAYLRKG
        + +A+ADANKAIELDPS +KAYLRKG
Subjt:  YLQAIADANKAIELDPSNSKAYLRKG
AT4G23570.3 phosphatase-related9.2e-0583.33Show/hide
Query:  QAIADANKAIELDPSNSKAYLRKG
        +A+ADANKAIELDPS +KAYLRKG
Subjt:  QAIADANKAIELDPSNSKAYLRKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCCACCCACGCCCATCCGTTTTCGCGCCGCCGTCTTCGACTCTGTTTGCCGCTGCCGTCTTCGACTCCGCTTGTCGTCGCCGTCTTCGACTCTCGGTTCCGCCGCCGC
TGCTGCTTTGACTCCCGATTCTGCCGCCGCTTCAACTCCCGATTCCGCCGTTGCCGTCTTTGACTCCCAGTTCTGCCGCCGCTATCTTCAGGCTATTGCTGATGCTAACA
AAGCAATTGAACTTGACCCTTCAAATTCAAAAGCATACTTGCGCAAAGGCCTTCTTGTATTATGCCAAACAGGCTTATCATCAACCAATTATGATATTCAATGGGAGTGT
CCTAACTTCGATCCAATAATTCATGTCGTCACAAGGAGGAAGAACGTCGAAATAGGGACGAGGGATGATTTTGACTTCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCCACCCACGCCCATCCGTTTTCGCGCCGCCGTCTTCGACTCTGTTTGCCGCTGCCGTCTTCGACTCCGCTTGTCGTCGCCGTCTTCGACTCTCGGTTCCGCCGCCGC
TGCTGCTTTGACTCCCGATTCTGCCGCCGCTTCAACTCCCGATTCCGCCGTTGCCGTCTTTGACTCCCAGTTCTGCCGCCGCTATCTTCAGGCTATTGCTGATGCTAACA
AAGCAATTGAACTTGACCCTTCAAATTCAAAAGCATACTTGCGCAAAGGCCTTCTTGTATTATGCCAAACAGGCTTATCATCAACCAATTATGATATTCAATGGGAGTGT
CCTAACTTCGATCCAATAATTCATGTCGTCACAAGGAGGAAGAACGTCGAAATAGGGACGAGGGATGATTTTGACTTCTGA
Protein sequenceShow/hide protein sequence
SPPTPIRFRAAVFDSVCRCRLRLRLSSPSSTLGSAAAAALTPDSAAASTPDSAVAVFDSQFCRRYLQAIADANKAIELDPSNSKAYLRKGLLVLCQTGLSSTNYDIQWEC
PNFDPIIHVVTRRKNVEIGTRDDFDF