CuGenDBv2

Gene ID	Spg007552
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Rubredoxin-like domain-containing protein
Genome location	scaffold2:177438..179301
RNA-Seq Expression	Spg007552
Synteny	Spg007552
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589344.1 hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia]

3.7e-77

89.22

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Query:  SATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYF
        SA+SL   LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD YF
Subjt:  SATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYF

Query:  CPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        CPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Subjt:  CPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

9.6e-78

88.95

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
        MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF

XP_022987160.1 uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]

1.6e-77

87.72

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
        MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R Q  AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLP
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSVTKN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

5.6e-78

88.3

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
        MAS SA+SL F LPP PHSKINQEDGGADR SM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPIAAAVGI+ALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_023516580.1 uncharacterized protein LOC111780418 isoform X2 [Cucurbita pepo subsp. pepo]

2.4e-76

87.5

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Query:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY
        + A+SL F LPP PHSKINQEDGGADR SM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD Y
Subjt:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY

Query:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        FCPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPIAAAVGI+ALVGLYLYLNSVF
Subjt:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UPF0 Rubredoxin family protein

3.3e-76

86.63

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAA-PKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSA+SL F LPPKPH K+NQEDGG DR+SMF   +SNRL LKSSFISPLRKIPSLR Q+S VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAA-PKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+V KN NEFD+RKARKAQIQKDE+IGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

A0A6J1E1X1 uncharacterized protein LOC111429830 isoform X2

2.0e-76

88.17

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Query:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY
        + A+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPD Y
Subjt:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY

Query:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF
        FCPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Subjt:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF

A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X1

4.7e-78

88.95

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
        MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPLR+IPS R Q  AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSVTKN NEFDVRKARKAQIQKDE+IGKVLPI AAAVGIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPI-AAAVGIVALVGLYLYLNSVF

A0A6J1JDC8 uncharacterized protein LOC111484793 isoform X2

3.3e-76

86.9

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Query:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY
        + A+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R Q  AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLPD Y
Subjt:  VSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKY

Query:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        FCPVCGAPKRRFRPYEQSVTKN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Subjt:  FCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

A0A6J1JG21 uncharacterized protein LOC111484793 isoform X1

7.9e-78

87.72

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Query:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP
        MAS SA+SL F LPP PHSKINQEDGGADRDSM WG +SNR  LKSSFISPL +IPS R Q  AVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLP
Subjt:  MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSVTKN NEFD RKARKAQIQKDE+IGKVLPIAAAVGIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

1.7e-05

41.07

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Query:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

1.0e-05

48.84

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Query:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PF++LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

2.3e-05

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Query:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYE
        ++C+ CGYIY++            T FE+LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

4.3e-04

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Query:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PF+KLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

2.5e-04

41.18

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Query:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ
        Y+C  CGYIY           N  T FE +PD + CP+CG  K +F P E+
Subjt:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

5.0e-08

40.32

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Query:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTK
        A P+F  ++   Q     +IC DCG+IY     F++ PD Y CP C APK+RF  Y+ +  K
Subjt:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTK

AT5G51010.1 Rubredoxin-like superfamily protein

2.4e-42

59.72

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Query:  SMFWGRSSNRLP-----LKSSFISPLRKIPSLRTQSS-AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKN
        +++ GRSS  LP     L+ S   P   +  L  + S + ++AP+FSMRV+SKQAYICRDCGYIYNDRTPF+KLPD YFCPVC APKRRFR Y   V+KN
Subjt:  SMFWGRSSNRLP-----LKSSFISPLRKIPSLRTQSS-AVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKN

Query:  ANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNS
         N+ DVRKARKA++Q+DE++GK LPI  AVG++AL  LY Y+NS
Subjt:  ANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNS

Sequences

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CDS sequence

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ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCG
TAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGC
GCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCT
CCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGAA
GGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG

mRNA sequence

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Protein sequence

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MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGA
PKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF

Spg007552 (gene) of Sponge gourd (cylindrica) v1 genome