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Spg007572 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007572
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein indeterminate-domain 16
Genome locationscaffold2:409154..409675
RNA-Seq ExpressionSpg007572
SyntenySpg007572
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]1.5e-6281.97Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVDLQLSISLRP          +FKYEE  VMKPEAASCVEAL
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL

Query:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        KWQAAEQIRLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]6.8e-6380.54Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-----------MFKYEEVKVMKPEAASCVE
        MEDEDQKELQLLPT HS   +SSS SH+SSRPS+ SSLRFRSDPLFEA        GGSVDLQLSISLRP           +FKYEE  VMKPEAASCV+
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-----------MFKYEEVKVMKPEAASCVE

Query:  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]5.2e-6382.51Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVDLQLSISLRP          +FKYEE  VMKPEAASCVEAL
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL

Query:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

XP_022921773.1 protein indeterminate-domain 16-like [Cucurbita moschata]3.7e-6180Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ
        MEDEDQKELQLLPT H ++ASSSS SHMSSRPS SS+RFRSDP          AG GS+DLQLSIS+RP       +FKYEE  VMKPEAASCVEALKWQ
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ

Query:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        AAEQIRLAAMEKAYAERVRELTKREIELAQTEF RARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFR S
Subjt:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]8.8e-6383.89Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSD  FEAAG       GSVDLQLSISLRP       +FKYEE  VMKPEAASCVEALKWQ
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ

Query:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein3.3e-6380.54Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-----------MFKYEEVKVMKPEAASCVE
        MEDEDQKELQLLPT HS   +SSS SH+SSRPS+ SSLRFRSDPLFEA        GGSVDLQLSISLRP           +FKYEE  VMKPEAASCV+
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSE-SSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-----------MFKYEEVKVMKPEAASCVE

Query:  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

A0A1S3CN02 protein indeterminate-domain 162.5e-6382.51Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVDLQLSISLRP          +FKYEE  VMKPEAASCVEAL
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL

Query:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

A0A5A7UWD1 Protein indeterminate-domain 167.3e-6381.97Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVDLQLSISLRP          +FKYEE  VMKPEAASCVEAL
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL

Query:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        KWQAAEQIRLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

A0A5D3BFD1 Protein indeterminate-domain 162.5e-6382.51Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL
        MEDEDQKELQLLPT H S+ASSS  SHMSSRPS+SSLRFRSDP FEA        GGSVDLQLSISLRP          +FKYEE  VMKPEAASCVEAL
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP----------MFKYEEVKVMKPEAASCVEAL

Query:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFRPS
Subjt:  KWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like1.8e-6180Show/hide
Query:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ
        MEDEDQKELQLLPT H ++ASSSS SHMSSRPS SS+RFRSDP          AG GS+DLQLSIS+RP       +FKYEE  VMKPEAASCVEALKWQ
Subjt:  MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRP-------MFKYEEVKVMKPEAASCVEALKWQ

Query:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS
        AAEQIRLAAMEKAYAERVRELTKREIELAQTEF RARQMWERAREE+EKAER+K+RATRQMDSTCMEITCQSCR RFR S
Subjt:  AAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 53.4e-0941.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

Q9C9X7 Protein indeterminate-domain 143.5e-0633.05Show/hide
Query:  GSVDLQLSISLRPMFKYE---EVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQ
        GS++LQL  S     +      +  M  +  S VE   ++  E     ++E+   E  R  TKR+IE+A+ EFA A+++ + AR EL KA   ++ A+R+
Subjt:  GSVDLQLSISLRPMFKYE---EVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQ

Query:  MDSTCMEITCQSCRHRFR
        + +T M+ITC +C+  F+
Subjt:  MDSTCMEITCQSCRHRFR

Q9FRH4 Protein indeterminate-domain 169.3e-0741.18Show/hide
Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        E   AE  R+  KR+IE+A+ +F +A+++ E A+ ELEKA  +++ A +++++T MEITC SC+  F+
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 166.6e-0841.18Show/hide
Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        E   AE  R+  KR+IE+A+ +F +A+++ E A+ ELEKA  +++ A +++++T MEITC SC+  F+
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

AT2G01940.1 C2H2-like zinc finger protein2.4e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

AT2G01940.2 C2H2-like zinc finger protein2.4e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

AT2G01940.3 C2H2-like zinc finger protein2.4e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ ELE+A+ +K+++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)5.0e-3249.71Show/hide
Query:  EDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRPMFKYEEVKVMKPEAASCVEALKWQAAEQIRLA
        + +  KELQLLP+  S+ +    H          +   RS  +              +DL+LSISL  +   EE+    P     VEALKWQAAEQIRLA
Subjt:  EDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRPMFKYEEVKVMKPEAASCVEALKWQAAEQIRLA

Query:  AMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRP
        A+EKAYAERVRELT+RE+E+AQ+EFARAR MW++AREE+E+AER+K+R+  ++D+ C+EITC SCR RFRP
Subjt:  AMEKAYAERVRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAAGAATTGCAGCTCCTTCCGACGGGTCACAGCTCTCTAGCGTCGTCGTCGTCCCATTCCCACATGTCGTCTCGTCCATCGGAGTCGTCGTT
ACGGTTCCGGTCGGATCCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGCAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACG
AGGAGGTGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATACGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGA
GTTCGAGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGGCAGATGTGGGAAAGGGCAAGAGAGGAACTCGAAAAGGCCGAGCGAATCAA
AGACCGAGCCACTCGCCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCACAGGTTCCGCCCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGATCAGAAAGAATTGCAGCTCCTTCCGACGGGTCACAGCTCTCTAGCGTCGTCGTCGTCCCATTCCCACATGTCGTCTCGTCCATCGGAGTCGTCGTT
ACGGTTCCGGTCGGATCCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGCAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACG
AGGAGGTGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATACGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGA
GTTCGAGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGGCAGATGTGGGAAAGGGCAAGAGAGGAACTCGAAAAGGCCGAGCGAATCAA
AGACCGAGCCACTCGCCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCACAGGTTCCGCCCTTCTTGA
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTGHSSLASSSSHSHMSSRPSESSLRFRSDPLFEAAGAGAGAGGGSVDLQLSISLRPMFKYEEVKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAER
VRELTKREIELAQTEFARARQMWERAREELEKAERIKDRATRQMDSTCMEITCQSCRHRFRPS