CuGenDBv2

Gene ID	Spg007586
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP-dependent RNA helicase
Genome location	scaffold2:1747958..1748756
RNA-Seq Expression	Spg007586
Synteny	Spg007586
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587786.1 hypothetical protein SDJN03_16351, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-35

55.81

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR
        YMYA LV PQSF+G  G+VK+V T             EV++ES ANMTKE+RIC++DL++ E +  + ++ R
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR

KAG7035711.1 hypothetical protein SDJN02_02509, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-35

55.23

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR
        YMYA LV PQSF+G  G+VK+V T             EV++ES  NMTKE+RIC++DL++ E +  + ++ R
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR

XP_022933890.1 uncharacterized protein LOC111441170 isoform X1 [Cucurbita moschata]

7.2e-36

56.4

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR
        YMYA LV PQSF+G  G+VK+V T             EV++ES ANMTKE+RIC++DL++ E +  + ++ R
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR

XP_022968868.1 uncharacterized protein LOC111468025 [Cucurbita maxima]

7.2e-36

57.47

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC L+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDL------VDRENLTSKE
        YMYA LV PQSFRG  G+VK+V T             EV++ES ANMTKE+RIC++DL      VD++N T+KE
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDL------VDRENLTSKE

XP_038880614.1 uncharacterized protein LOC120072259 [Benincasa hispida]

2.7e-35

52.15

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Query:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAPLV
        MAKKMV V G GG+ K+R+IKR+KKK++HKVIDY+LSDCYL+APL+       SS SP N +  P +GIEIRER KD RSL K I+DYLKSDCYMYA L+
Subjt:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAPLV

Query:  TPQSFR---------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKMRKIVVD
         PQS R         G VG+VKKV  EV+            + T  +    N T  ESSKRS+Y+    I   G R+ K R+IVVD
Subjt:  TPQSFR---------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKMRKIVVD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8Y3 uncharacterized protein LOC103487306 isoform X1

1.4e-29

50.8

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Query:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAP
        MAKKMV V   G GG+ KKR+IKR+KKK IHKVIDYLLSDCYL+APL+IS S  +      N + +P +GIEIR R KD RSL+KK +DYLKSDCYMYA 
Subjt:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAP

Query:  LVTPQSFR-------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKM-RKIVVD
        LVTP+S R       G V + KKVS EV             +  S+ V+    T   + +RS+YSN   +   G R+ K+ R+IVVD
Subjt:  LVTPQSFR-------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKM-RKIVVD

A0A5D3B7P7 Uncharacterized protein

1.4e-29

50.8

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Query:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAP
        MAKKMV V   G GG+ KKR+IKR+KKK IHKVIDYLLSDCYL+APL+IS S  +      N + +P +GIEIR R KD RSL+KK +DYLKSDCYMYA 
Subjt:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAP

Query:  LVTPQSFR-------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKM-RKIVVD
        LVTP+S R       G V + KKVS EV             +  S+ V+    T   + +RS+YSN   +   G R+ K+ R+IVVD
Subjt:  LVTPQSFR-------GCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKM-RKIVVD

A0A6J1C0T7 uncharacterized protein LOC111007025 isoform X1

4.7e-33

56.69

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Query:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAPLV
        MAK++V   G+   +KK I+KR KKKTIHKV+DYL+SD YL+APLI       SS+ PFN +RS  KGIE RERRKD RSL+KKIEDYLKSDCYMYAPL+
Subjt:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAPLV

Query:  TPQS-FRGCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYS
         PQ+  RGC   +KKV+TE+++ES ANM + + ICT D     N  +K+S +  ++S
Subjt:  TPQS-FRGCVGHVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYS

A0A6J1F636 uncharacterized protein LOC111441170 isoform X1

3.5e-36

56.4

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR
        YMYA LV PQSF+G  G+VK+V T             EV++ES ANMTKE+RIC++DL++ E +  + ++ R
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDLVDRENLTSKESSKR

A0A6J1HZC1 uncharacterized protein LOC111468025

3.5e-36

57.47

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC L+APLI        S SPFN  R+PRKG      IEIRER KD RS LKK+ DYLKSDC
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKG------IEIRERRKDKRSLLKKIEDYLKSDC

Query:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDL------VDRENLTSKE
        YMYA LV PQSFRG  G+VK+V T             EV++ES ANMTKE+RIC++DL      VD++N T+KE
Subjt:  YMYAPLVTPQSFRGCVGHVKKVST-------------EVLNESGANMTKEKRICTSDL------VDRENLTSKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57790.1 unknown protein

3.4e-07

27.78

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Query:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIIS--------SSSSSSSSSPFNPNRSPRKGIEIR--ERRKDKRSLLKKIEDYLKSDCYMYAPLV-TPQS
        +K++ ++  ++ +  ++ YL SD YL+APL  +         +   S+S P   +    +G E    E+   KR + +K+++YLKSDCYMY+P++ +P  
Subjt:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIIS--------SSSSSSSSSPFNPNRSPRKGIEIR--ERRKDKRSLLKKIEDYLKSDCYMYAPLV-TPQS

Query:  FRGCVGHVKKVSTEVLNESGANMTKE
            V    +++ EV  +      KE
Subjt:  FRGCVGHVKKVSTEVLNESGANMTKE

AT5G57790.2 unknown protein

3.4e-07

27.78

Show/hide

Query:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIIS--------SSSSSSSSSPFNPNRSPRKGIEIR--ERRKDKRSLLKKIEDYLKSDCYMYAPLV-TPQS
        +K++ ++  ++ +  ++ YL SD YL+APL  +         +   S+S P   +    +G E    E+   KR + +K+++YLKSDCYMY+P++ +P  
Subjt:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIIS--------SSSSSSSSSPFNPNRSPRKGIEIR--ERRKDKRSLLKKIEDYLKSDCYMYAPLV-TPQS

Query:  FRGCVGHVKKVSTEVLNESGANMTKE
            V    +++ EV  +      KE
Subjt:  FRGCVGHVKKVSTEVLNESGANMTKE

Sequences

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CDS sequence

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ATGGCGAAAAAAATGGTGGCTGTTGCAGGGAGCGGCGGGGTTTTAAAGAAGAGAATCATCAAGAGGAACAAGAAGAAAACAATTCACAAAGTGATCGATTATCTCTTATC
CGATTGCTACTTATATGCTCCTCTCATTATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACCGTTTAATCCTAATCGCTCACCCAGAAAAGGGATCGAAATCAGAGAAC
GCAGAAAAGATAAGCGGAGTTTGCTGAAGAAGATCGAGGATTATTTGAAATCTGATTGCTACATGTATGCTCCTCTCGTTACACCCCAATCCTTCAGAGGGTGTGTTGGG
CATGTGAAGAAGGTAAGTACGGAAGTTTTGAATGAATCGGGTGCGAATATGACGAAGGAGAAGAGAATTTGCACAAGTGATTTAGTGGATCGAGAAAATCTGACAAGCAA
GGAATCATCGAAGCGCAGCGTGTATTCAAATTGTCGATTGATTGAAGGAGAAGGAAGGCGTGAGGCAAAGATGAGGAAGATTGTGGTTGATTGA

mRNA sequence

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Protein sequence

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MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIISSSSSSSSSSPFNPNRSPRKGIEIRERRKDKRSLLKKIEDYLKSDCYMYAPLVTPQSFRGCVG
HVKKVSTEVLNESGANMTKEKRICTSDLVDRENLTSKESSKRSVYSNCRLIEGEGRREAKMRKIVVD

Spg007586 (gene) of Sponge gourd (cylindrica) v1 genome