; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007601 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007601
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L35
Genome locationscaffold2:1578466..1580540
RNA-Seq ExpressionSpg007601
SyntenySpg007601
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023426.1 50S ribosomal protein L35, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.1e-6489.4Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS   SFGLRFSPLCSR SVRVS SSVRL S NKA SL+L SSHNIS FGVALLQKP HIAPSS++HTP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_008443834.1 PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]8.2e-6587.42Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS AVSFGLRFSPLCSR S RVSH+SV LASFNK NSLKL SSHNISGFG+  LQKP HI+P+SQ+HTP TVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]2.0e-6692.76Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLA-SFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAST VSFGLRFSPLCSR SVRVSH SVRLA SFNK NSL+LGSS NISGFGVALLQK  HIAP+SQVHTPLTV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLA-SFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022988597.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita maxima]3.1e-6488.74Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS +VSFGLRFSPLCSR SVRVS  SVRL S NKA SL+L SSHN+S FGVALLQKP HIAPSS++HTP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_023516182.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-6488.74Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS   SFGLRFSPLCSR SVRVS SSVRL S NKA SL+L SSHNIS FGVAL+QKPCHIAPSS++ TP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

TrEMBL top hitse value%identityAlignment
A0A1S3B9R8 50S ribosomal protein L354.0e-6587.42Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS AVSFGLRFSPLCSR S RVSH+SV LASFNK NSLKL SSHNISGFG+  LQKP HI+P+SQ+HTP TVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1C550 50S ribosomal protein L359.5e-6792.76Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLA-SFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAST VSFGLRFSPLCSR SVRVSH SVRLA SFNK NSL+LGSS NISGFGVALLQK  HIAP+SQVHTPLTV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLA-SFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1E327 50S ribosomal protein L354.9e-6388.08Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS   SFGLRF PLCSR SV VS SSVRL S NKA SL+L SSHNIS FGVALLQKP HIAPSS++HTP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1EZN8 50S ribosomal protein L353.7e-6388.08Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASTA  FGLRF+PLCSR S  VS SS+RLASFNKANSL+L SSHNISG GVALLQK C IAP  QV TPLTV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1JDG6 50S ribosomal protein L351.5e-6488.74Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS +VSFGLRFSPLCSR SVRVS  SVRL S NKA SL+L SSHN+S FGVALLQKP HIAPSS++HTP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

SwissProt top hitse value%identityAlignment
B2J0D1 50S ribosomal protein L355.1e-0957.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+AGK HLL  K++ +K  +SK   V   D  NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

P23326 50S ribosomal protein L35, chloroplastic7.3e-3259.12Show/hide
Query:  MASASTAVSF---GLRFSPLCSRQSVRVSHSSVRLASFNK--ANSLKLGSSHNISGFGV--ALLQKPCHIAPSSQVHT---PLTVFAAKGYKMKTHKASA
        MASA+  +SF    L  SP  +R S   +   + L  FNK   ++L L SS +IS   V   +L+        S V T     TVFAAKGYKMKTHKASA
Subjt:  MASASTAVSF---GLRFSPLCSRQSVRVSHSSVRLASFNK--ANSLKLGSSHNISGFGV--ALLQKPCHIAPSSQVHT---PLTVFAAKGYKMKTHKASA

Query:  KRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ
        KRFRVTG+GKIVRRRAGKQHLL KKNTKRK RLSK+  V RSDYDNVIGALPYLKVNR+
Subjt:  KRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ

Q3M7I2 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Q8VZ55 50S ribosomal protein L35, chloroplastic4.6e-3463.16Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVS-HSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIA-PSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGR
        MAS S A S  + F       S +VS  SSV  A+        L SSH+ISG    L  K   +A P+SQ     TVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVS-HSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIA-PSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L353.3e-3563.16Show/hide
Query:  MASASTAVSFGLRFSPLCSRQSVRVS-HSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIA-PSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGR
        MAS S A S  + F       S +VS  SSV  A+        L SSH+ISG    L  K   +A P+SQ     TVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASTAVSFGLRFSPLCSRQSVRVS-HSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIA-PSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCGACGGCGGTGTCCTTTGGCCTTAGGTTTTCCCCACTGTGCTCTCGCCAATCAGTTCGCGTCTCTCATAGTTCCGTCCGGCTCGCTTCGTTCAACAA
GGCGAACTCCTTGAAGCTCGGTTCCTCCCACAACATTTCCGGGTTTGGAGTCGCTCTCCTTCAGAAGCCATGTCACATTGCTCCCAGTTCTCAAGTTCATACGCCCCTCA
CTGTTTTCGCTGCCAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCAAAGCGATTCAGAGTGACGGGTCGGGGAAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCAT
TTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAA
TAGGCAGGCGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTGCTTCGACGGCGGTGTCCTTTGGCCTTAGGTTTTCCCCACTGTGCTCTCGCCAATCAGTTCGCGTCTCTCATAGTTCCGTCCGGCTCGCTTCGTTCAACAA
GGCGAACTCCTTGAAGCTCGGTTCCTCCCACAACATTTCCGGGTTTGGAGTCGCTCTCCTTCAGAAGCCATGTCACATTGCTCCCAGTTCTCAAGTTCATACGCCCCTCA
CTGTTTTCGCTGCCAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCAAAGCGATTCAGAGTGACGGGTCGGGGAAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCAT
TTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAA
TAGGCAGGCGAAGTAG
Protein sequenceShow/hide protein sequence
MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQH
LLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK