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Spg007602 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007602
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCentromere protein X
Genome locationscaffold2:801420..805398
RNA-Seq ExpressionSpg007602
SyntenySpg007602
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2753.8Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEWSR+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]4.2e-2753.8Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEWSR+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]4.2e-2753.8Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEW+R+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]1.9e-2754.43Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEWSR+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_038879195.1 protein MHF2 homolog isoform X1 [Benincasa hispida]3.2e-2753.16Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEE+AF PDLIHAIFKLEWSR+S   E                                                        N  P A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKLSSKL+Q+F+SEA+QRAATIAEAEGI+RIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein2.7e-2451.25Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGT
        MEE+ F PDLIHAIFKLEWSR+S                                                      L        P A+   VD  AGT
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGT

Query:  SKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        SKKSRPMSANANALKLSSKL+Q+FISEA+QRAATIAEAEGISRIE THLER+LPQLLLDF
Subjt:  SKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A1S3CLK5 centromere protein X isoform X27.2e-2551.25Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGT
        MEE+ F PDLIHAIFKLEWSR+S   E                                                        N  P A+   VD  AGT
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVD--AGT

Query:  SKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        SKKSRPMSANANALKLSSKL+Q+FISEA+QRAATIAEAEGI RIE THLER+LPQLLLDF
Subjt:  SKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1C4N9 protein MHF2 homolog7.7e-2754.43Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEESAFD DLIHAIFKLEWSR+S                                                   + R  N +++    A+   V+AGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKLSSKLLQ+FISEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1E4X1 protein MHF2 homolog2.0e-2753.8Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEWSR+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1JD93 protein MHF2 homolog2.0e-2753.8Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK
        MEES FDPDLIHAIFKLEW+R+S                                                   + R  N +++    A+   VDAGTSK
Subjt:  MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSK

Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        KSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

SwissProt top hitse value%identityAlignment
P0DJH7 Centromere protein X4.2e-0649.02Show/hide
Query:  NANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X2.7e-0541.38Show/hide
Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        K +    + +AL+L ++LL++F+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog6.3e-1875.38Show/hide
Query:  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        V  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein4.5e-1975.38Show/hide
Query:  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        V  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  VDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

AT1G78790.2 unknown protein2.5e-0955.93Show/hide
Query:  KKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        ++S  + A    + L +       SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  KKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCAAATGGTTCGGAATCACTCTATCCTTCTTTCTTTCTATCTTT
TTTCAATTTTTCATTCCCTCCGATTCCAATCCTTTCTGATCGTTTCTTCATTTTGCCTCTGGTGCTCGGATTTCTTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTAT
GGATTGCGAGGCTAGCGAATTTGACTACAAACGTGTATCCATTAGCGGTTATCTATCTTGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGCCAATGCAAAT
GCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGAGGCCATACAGCGTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTT
GGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCAAATGGTTCGGAATCACTCTATCCTTCTTTCTTTCTATCTTT
TTTCAATTTTTCATTCCCTCCGATTCCAATCCTTTCTGATCGTTTCTTCATTTTGCCTCTGGTGCTCGGATTTCTTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTAT
GGATTGCGAGGCTAGCGAATTTGACTACAAACGTGTATCCATTAGCGGTTATCTATCTTGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGCCAATGCAAAT
GCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGAGGCCATACAGCGTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTT
GGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGA
Protein sequenceShow/hide protein sequence
MEESAFDPDLIHAIFKLEWSRKSNGSESLYPSFFLSFFNFSFPPIPILSDRFFILPLVLGFLQSARKTRVLMLWIARLANLTTNVYPLAVIYLVDAGTSKKSRPMSANAN
ALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF