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Spg007680 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007680
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationscaffold2:1698106..1698603
RNA-Seq ExpressionSpg007680
SyntenySpg007680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443812.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]6.5e-3175.15Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
        GS+AGSRAGSGSGRNR NGGSGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Subjt:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]3.7e-3480.72Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNG-GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
        GS+    AGSGSGRNRN G GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Subjt:  GSHAGSRAGSGSGRNRNNG-GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

XP_023515818.1 putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo]7.7e-3269.61Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIRAV+I+AL+L +S IVSESR+AR DLGLDLGGVG+G+GTGVGLGLG               GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSG--------------------SGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN
        GS+AGSRAGSG                    SGRNRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Subjt:  GSHAGSRAGSG--------------------SGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN

XP_023515819.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]1.2e-2974.53Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASI ++ +V  +L  S IVS++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSGSGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY 
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN
           AGSRAGS SGRNRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Subjt:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]7.7e-4086.67Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIRAVTI+A +LGVS IVSE RVAR +LGLDLGGVGLGVGTGVGLGLG       GSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
        GS+AGSRAGSGSGRNR NGGSGSGSGSGYGAGSGRGS    GEGYGEGHGYGEGHGYG  NGGEN
Subjt:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

TrEMBL top hitse value%identityAlignment
A0A1S3B8Y8 putative glycine-rich cell wall structural protein 13.2e-3175.15Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
        GS+AGSRAGSGSGRNR NGGSGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Subjt:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like3.0e-2972.22Show/hide
Query:  MASIRAVT-IVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY
        MASI+++  +V L+L  S  +SE RVARKDLG+DLGG+G+G+G G+GLG+G       GSGSGSGSGSGSGSGSGSSS+SSS+SSSSSSGS AGSEAGSY
Subjt:  MASIRAVT-IVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY

Query:  AGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN
        AGS+AGSRAGSGSG NRN    GSG GSGYG GSGRG  +G GEGYGEGHGYGEGHGYG  N
Subjt:  AGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like1.8e-3480.72Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNG-GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
        GS+    AGSGSGRNRN G GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Subjt:  GSHAGSRAGSGSGRNRNNG-GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

A0A6J1E2L1 cell wall protein IFF6-like isoform X11.7e-2968.93Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY-
        MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSGSGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY 
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY-

Query:  ---------------AGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN
                       AGS+AGSRAGSGSG NRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Subjt:  ---------------AGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X31.3e-2973.91Show/hide
Query:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA
        MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSGSGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY 
Subjt:  MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYA

Query:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN
           AGSRAGSGSG NRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Subjt:  GSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein5.0e-1363.16Show/hide
Query:  MASIRAVTIVALVLGVSFI-VSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY
        MA    + ++ LV+  S + ++ESR+ARKDLG+DLGG+G+G+G G+G+GLGG      GSGSG+G+GSGSGSGS SSS+SSS SSSSSSGS  G  AGS 
Subjt:  MASIRAVTIVALVLGVSFI-VSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY

Query:  AGSHAGSRAGSGSG
        AGS AGSRAGSGSG
Subjt:  AGSHAGSRAGSGSG

AT4G30460.1 glycine-rich protein2.6e-2265.19Show/hide
Query:  AVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAG
        ++ ++ L+L  S +VSESRVARKDLGLDLGG+G G+G G+G+G GGGSGSG+G+GSGSG   G GS S SSS+SSS SSS   G DAGSEAGSYAGSHAG
Subjt:  AVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAG

Query:  SRAG--SGSGRNRNNGGSGS-GSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND
        S +G  SGSGR R +GG G  G G G G G G G GSG GEGYGEG GYG G+G G+D
Subjt:  SRAG--SGSGRNRNNGGSGS-GSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGT
CGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTG
GGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCA
GGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGA
GGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGT
CGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTG
GGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCA
GGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGA
GGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGA
Protein sequenceShow/hide protein sequence
MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGS
GSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN