; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007699 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007699
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold2:1158961..1164174
RNA-Seq ExpressionSpg007699
SyntenySpg007699
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2629256.1 hypothetical protein D8674_034051 [Pyrus ussuriensis x Pyrus communis]9.2e-0636.46Show/hide
Query:  NQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV---IRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLAR
        N   W PPP   +K+N + +W   R  GGVG I RD SG  + V   +  L   +++LS    ++  IE L SS   + F    R  N  AH LAR
Subjt:  NQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV---IRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLAR

XP_010445342.1 PREDICTED: uncharacterized protein LOC104727993 [Camelina sativa]8.7e-0440.91Show/hide
Query:  SEEQRKRQESN-LELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV
        SEE R R+E   L++    +    G W PPP+  +K NT+ASW+ + NR G+GW+ R+  G  I V
Subjt:  SEEQRKRQESN-LELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.0e-0446.77Show/hide
Query:  LSEEQRKRQESNLELLSLENLRNQGT-WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG
        +S+ +R +Q         ENL   G  W+ PP+NC KLNT+ASW+EER  GG+GWI  D  G
Subjt:  LSEEQRKRQESNLELLSLENLRNQGT-WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]3.9e-0427.91Show/hide
Query:  ENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------------------------SPIEVIRVLNHETLDLSKTKLVVNKIENLA
        +NL     W PP  +  KLN +A+W +  + GG+GWI RDS G                             +EV+ ++N  ++ L++  L+V  I    
Subjt:  ENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------------------------SPIEVIRVLNHETLDLSKTKLVVNKIENLA

Query:  SSCNVISFVKCPRARNIIAHHLARAAAGF
         S  +  F   P   N +AH +AR A  F
Subjt:  SSCNVISFVKCPRARNIIAHHLARAAAGF

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.8e-0729.56Show/hide
Query:  EQRKRQESNLELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPI---------------------------------------
        E   + E++L +L  + L N+  W PPP +   LN +ASW++  +RGG+GWI R   G  +                                       
Subjt:  EQRKRQESNLELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPI---------------------------------------

Query:  -----EVIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAA
             EV  +LN +  DL+KT  VV +I NL  SC +++F K  R  N  AH LA+ A+
Subjt:  -----EVIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAA

TrEMBL top hitse value%identityAlignment
A0A5N5HMS5 RNase H domain-containing protein4.5e-0636.46Show/hide
Query:  NQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV---IRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLAR
        N   W PPP   +K+N + +W   R  GGVG I RD SG  + V   +  L   +++LS    ++  IE L SS   + F    R  N  AH LAR
Subjt:  NQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPIEV---IRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLAR

A0A6J1CQG0 uncharacterized protein LOC1110132165.0e-0546.77Show/hide
Query:  LSEEQRKRQESNLELLSLENLRNQGT-WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG
        +S+ +R +Q         ENL   G  W+ PP+NC KLNT+ASW+EER  GG+GWI  D  G
Subjt:  LSEEQRKRQESNLELLSLENLRNQGT-WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG

A0A6J1D4B6 uncharacterized protein LOC1110171811.9e-0427.91Show/hide
Query:  ENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------------------------SPIEVIRVLNHETLDLSKTKLVVNKIENLA
        +NL     W PP  +  KLN +A+W +  + GG+GWI RDS G                             +EV+ ++N  ++ L++  L+V  I    
Subjt:  ENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------------------------SPIEVIRVLNHETLDLSKTKLVVNKIENLA

Query:  SSCNVISFVKCPRARNIIAHHLARAAAGF
         S  +  F   P   N +AH +AR A  F
Subjt:  SSCNVISFVKCPRARNIIAHHLARAAAGF

A0A6J1DNV9 uncharacterized protein LOC1110224031.8e-0729.56Show/hide
Query:  EQRKRQESNLELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPI---------------------------------------
        E   + E++L +L  + L N+  W PPP +   LN +ASW++  +RGG+GWI R   G  +                                       
Subjt:  EQRKRQESNLELLSLENLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSGSPI---------------------------------------

Query:  -----EVIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAA
             EV  +LN +  DL+KT  VV +I NL  SC +++F K  R  N  AH LA+ A+
Subjt:  -----EVIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-0451.43Show/hide
Query:  WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG
        W  PP   VK NT+A+W  E  R G+GWI R+ SG
Subjt:  WNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG

AT4G29090.1 Ribonuclease H-like superfamily protein4.4e-0622.28Show/hide
Query:  IYSAWASTNHVTPAPSFMLSEEQRKRQESNLELLSLE------------NLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------
        ++  W + N +        ++E  +R E +LE   +             N  + G W PPP   VK NT+A+WN +  R G+GW+ R+  G         
Subjt:  IYSAWASTNHVTPAPSFMLSEEQRKRQESNLELLSLE------------NLRNQGTWNPPPSNCVKLNTNASWNEERNRGGVGWIFRDSSG---------

Query:  -----SPIE-----------------------------VIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAAGF
             S +E                             +I +LN++ +     K  +  ++ L S    + FV  PR  N +A  +AR +  F
Subjt:  -----SPIE-----------------------------VIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAAGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATCTGCAGAGAAGTTTTGGTCCATTTCTGAGTTTTGAGAAAGGAAACAGAGGCTTTGGGAGCATGTGGGCAAGCCAAGTTTTTGAGGCCATCGTGCAATGCGC
AGCCGCAGTTGCGATGGCCGTAGCGCGCATTTATAGTGCATGGGCCTCCACAAACCACGTTACACCTGCGCCATCTTTCATGCTGTCAGAGGAACAGAGGAAGCGACAGG
AATCAAACCTGGAATTGCTCAGCTTGGAGAACCTTCGGAATCAAGGAACGTGGAATCCTCCCCCCTCTAATTGTGTCAAGCTCAACACGAATGCTTCTTGGAATGAGGAG
CGGAATAGGGGCGGCGTAGGATGGATATTTCGTGATTCTTCAGGGTCTCCGATTGAGGTTATCCGAGTGCTGAACCACGAAACTTTGGATTTATCGAAAACAAAATTGGT
GGTGAACAAAATCGAGAATCTGGCTTCGTCTTGCAATGTGATCTCCTTCGTAAAATGCCCGAGGGCTAGGAACATCATCGCACATCATCTGGCGCGAGCGGCGGCGGGTT
TTGCGCCAGCGGGAATCCTATCGCCCGGTGTCGTCGATGGGGAGTACGTTTTTTGGATCTCTTCCACGCGGGAAGATGATGAGTTTTGTAGGGATGAGAAGAAAAGAGAA
TCTGTCCAGGCTGAAGCAGCCAGCGGAGGGAATAATACAGCTGGTTTACGTGTTAGCCTCTATGCCCTAAGCGACACAATTTATGCCTCGAGAATGCACCACCTTTTTCT
TGTCAAATTCCTCCGTGGACGGGGAAGAAGAGGGAGAAGAAATGCCAGAACCAGAAGCAGCAGCCATAGCCAAGCAGCCCTCACTCCAGGCCCGTCTGATCGGATACGAG
ACGGTGTTGTGCTTGGACATGGCGTGCGAGCAGCGTCGGGCATCTCGGTCGTGAAGAGCGCAGCCGCAGTTCTTGTGGTAAGGACGGCGGTCGATCTCGGCGTCGCAGCC
GGCGATGCAGCCGTGGTAGACAGATCTGAGCAAGGCGTCGGCCATGGGTTCCGTCGTGATGGCCGCTGCCGTTGCCGGAAGAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATCTGCAGAGAAGTTTTGGTCCATTTCTGAGTTTTGAGAAAGGAAACAGAGGCTTTGGGAGCATGTGGGCAAGCCAAGTTTTTGAGGCCATCGTGCAATGCGC
AGCCGCAGTTGCGATGGCCGTAGCGCGCATTTATAGTGCATGGGCCTCCACAAACCACGTTACACCTGCGCCATCTTTCATGCTGTCAGAGGAACAGAGGAAGCGACAGG
AATCAAACCTGGAATTGCTCAGCTTGGAGAACCTTCGGAATCAAGGAACGTGGAATCCTCCCCCCTCTAATTGTGTCAAGCTCAACACGAATGCTTCTTGGAATGAGGAG
CGGAATAGGGGCGGCGTAGGATGGATATTTCGTGATTCTTCAGGGTCTCCGATTGAGGTTATCCGAGTGCTGAACCACGAAACTTTGGATTTATCGAAAACAAAATTGGT
GGTGAACAAAATCGAGAATCTGGCTTCGTCTTGCAATGTGATCTCCTTCGTAAAATGCCCGAGGGCTAGGAACATCATCGCACATCATCTGGCGCGAGCGGCGGCGGGTT
TTGCGCCAGCGGGAATCCTATCGCCCGGTGTCGTCGATGGGGAGTACGTTTTTTGGATCTCTTCCACGCGGGAAGATGATGAGTTTTGTAGGGATGAGAAGAAAAGAGAA
TCTGTCCAGGCTGAAGCAGCCAGCGGAGGGAATAATACAGCTGGTTTACGTGTTAGCCTCTATGCCCTAAGCGACACAATTTATGCCTCGAGAATGCACCACCTTTTTCT
TGTCAAATTCCTCCGTGGACGGGGAAGAAGAGGGAGAAGAAATGCCAGAACCAGAAGCAGCAGCCATAGCCAAGCAGCCCTCACTCCAGGCCCGTCTGATCGGATACGAG
ACGGTGTTGTGCTTGGACATGGCGTGCGAGCAGCGTCGGGCATCTCGGTCGTGAAGAGCGCAGCCGCAGTTCTTGTGGTAAGGACGGCGGTCGATCTCGGCGTCGCAGCC
GGCGATGCAGCCGTGGTAGACAGATCTGAGCAAGGCGTCGGCCATGGGTTCCGTCGTGATGGCCGCTGCCGTTGCCGGAAGAGGAGTTGA
Protein sequenceShow/hide protein sequence
MNDLQRSFGPFLSFEKGNRGFGSMWASQVFEAIVQCAAAVAMAVARIYSAWASTNHVTPAPSFMLSEEQRKRQESNLELLSLENLRNQGTWNPPPSNCVKLNTNASWNEE
RNRGGVGWIFRDSSGSPIEVIRVLNHETLDLSKTKLVVNKIENLASSCNVISFVKCPRARNIIAHHLARAAAGFAPAGILSPGVVDGEYVFWISSTREDDEFCRDEKKRE
SVQAEAASGGNNTAGLRVSLYALSDTIYASRMHHLFLVKFLRGRGRRGRRNARTRSSSHSQAALTPGPSDRIRDGVVLGHGVRAASGISVVKSAAAVLVVRTAVDLGVAA
GDAAVVDRSEQGVGHGFRRDGRCRCRKRS