CuGenDBv2

Gene ID	Spg007707
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cytochrome c oxidase assembly factor 6
Genome location	scaffold2:1309227..1311075
RNA-Seq Expression	Spg007707
Synteny	Spg007707
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

5.8e-55

92.98

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE D+SGG DEVH+DVL+ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

XP_011655945.1 uncharacterized protein LOC101212489 isoform X1 [Cucumis sativus]

1.4e-53

90.35

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D+SGG DEVH+DVL+ESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]

5.3e-56

96.49

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE DASGGLDEVHSDVLA SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]

2.5e-53

90.35

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D SGG +EVH+DVLAE RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

2.8e-57

98.25

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE DASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA FVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTX1 Uncharacterized protein

7.0e-54

90.35

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D+SGG DEVH+DVL+ESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

2.8e-55

92.98

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE D+SGG DEVH+DVL+ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

2.8e-55

92.98

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE D+SGG DEVH+DVL+ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN

A0A6J1BZF0 uncharacterized protein LOC111006886

2.6e-56

96.49

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVE DASGGLDEVHSDVLA SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

A0A6J1I7I2 cytochrome c oxidase assembly factor 6

1.2e-53

90.35

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D SGG +EVH+DVLAE RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

1.6e-42

67.26

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Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++  AS   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

1.6e-42

67.26

Show/hide

Query:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++  AS   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences

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CDS sequence

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ATGGCTGTCGAAGTCGACGCGTCAGGAGGCTTAGATGAAGTTCACAGCGACGTTCTTGCGGAATCCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCGGACAAAAAGCCCACTGAAATTGCTTCTGTTGGCCTTATTTACCCCGCCGAGTGTAAAGCTTTGAGGGCCGAGTTTGTCAAACTTTGTAGGGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAATAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGTCCCTTGATACTTCCGCAGCCTTACACTTTT
AAGCCCACTAATTGA

mRNA sequence

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Protein sequence

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MAVEVDASGGLDEVHSDVLAESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRGPLILPQPYTF
KPTN

Spg007707 (gene) of Sponge gourd (cylindrica) v1 genome