| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-38 | 29.91 | Show/hide |
Query: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
++ I+H F ++ +N+ L K + INV + + + +GH PT+YLG+ LGG P S+ W ++++IQ+KL +WKY+ +SK
Subjt: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
Query: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
GGR TLI++TL SL +P+ SV WN S W L +++ L + E W ++ L + +
Subjt: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
Query: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
W L+S++ F +V+ ++ + +S NL+ + K +PKK K F+W L HG INTAD+LQ+R+ ++ SP+WC MC + ED HLF HC
Subjt: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
Query: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
+ Q WS W+ P ++ L+ +I
Subjt: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
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| RVW53692.1 putative ribonuclease H protein [Vitis vinifera] | 5.2e-37 | 25 | Show/hide |
Query: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSL------------------
K + GIN+D + L DC WP YLGL LGGNPK+ W P++ERI +L W+ AY+S GGR TLI + L+ L
Subjt: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSL------------------
Query: ---------------------------------------SPMDSVAQVWN--------------------------------------------------
P ++AQV+
Subjt: ---------------------------------------SPMDSVAQVWN--------------------------------------------------
Query: ---SESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGI
S W+L +NL++ E+ + L L + L + PD+ WPL SS F+V+S L S G ++N + P K+K F+W ++H +
Subjt: ---SESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGI
Query: NTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMAEEDLDHMLWHCDFARS
NT D LQ R + SP C++C + E HLF HCSL W + + D V P +I+D+++ F F + K+
Subjt: NTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMAEEDLDHMLWHCDFARS
Query: VWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAEDTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
G LWQ +I +W ERN RIF RN+E WD I + SLWA ++ F +++I LDW
Subjt: VWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAEDTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
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| RVW89856.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 1.5e-39 | 28.7 | Show/hide |
Query: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLS---------PMDSVAQV
K + IN+D I L DC WP YLGL LGGNP+ W P+IERI R+L W+ AY+S GR TLI + L+ + P A++
Subjt: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLS---------PMDSVAQV
Query: --------WN-----------------SESQAWDLG--LHQN------LNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSK
W+ S+ LG LH++ L + E+ + L L + L + PD+ +WPL SS F V+S L
Subjt: --------WN-----------------SESQAWDLG--LHQN------LNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSK
Query: GPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASI
G + + P K+K F+W ++H +NT D LQ R + SP C++C + E H+F HCSL + W + + DLV P +IFD+++
Subjt: GPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASI
Query: FVDHPFHSKKKTLWMAEEDLDHMLWHCDFARSVWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAE
F + F S K+ G LWQA +I +W ERN RIF RN+E
Subjt: FVDHPFHSKKKTLWMAEEDLDHMLWHCDFARSVWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAE
Query: DTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
WD I + SLWA +++F ++++ LDW
Subjt: DTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
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| RVW89856.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 1.5e-04 | 34.41 | Show/hide |
Query: SEEEVYLAIQSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCI
+EEE+ AI L K PG GFT+ F+ W V+K+D++ + E + SG+IN + F+ L PK L +D I ++TS + I
Subjt: SEEEVYLAIQSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCI
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| RVW89856.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 2.5e-39 | 30.59 | Show/hide |
Query: QSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIF--VSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLG
+SLG + P GFT+ F+ W V+K+++ + + + +L +F +S + K + GIN+D + L DC WP YLGL LG
Subjt: QSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIF--VSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLG
Query: GNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLSPMDSVAQVWN-----------------SESQAWDLGLHQNLNEEEVLEWASLSHL
GNPK W P+IERI +L W+ AY+S GGR TLI + L+ L P +A + + +W+L +NL++ ++ + L
Subjt: GNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLSPMDSVAQVWN-----------------SESQAWDLGLHQNLNEEEVLEWASLSHL
Query: LSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHI
L + L + PD+ +WPL SS F+V+S L S G ++ ++ P K+K F+ ++H +NT D LQ R + SP C++C + E
Subjt: LSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHI
Query: HLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMA
HLF HCSL W + + D V P +I D+++ F + LW A
Subjt: HLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMA
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| TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-38 | 29.91 | Show/hide |
Query: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
++ I+H F ++ +N+ L K + INV + + + +GH PT+YLG+ LGG P S+ W ++++IQ+KL +WKY+ +SK
Subjt: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
Query: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
GGR TLI++TL SL +P+ SV WN S W L +++ L + E W ++ L + +
Subjt: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
Query: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
W L+S++ F +V+ ++ + +S NL+ + K +PKK K F+W L HG INTAD+LQ+R+ ++ SP+WC MC + ED HLF HC
Subjt: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
Query: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
+ Q WS W+ P ++ L+ +I
Subjt: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438F215 Putative ribonuclease H protein | 2.5e-37 | 25 | Show/hide |
Query: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSL------------------
K + GIN+D + L DC WP YLGL LGGNPK+ W P++ERI +L W+ AY+S GGR TLI + L+ L
Subjt: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSL------------------
Query: ---------------------------------------SPMDSVAQVWN--------------------------------------------------
P ++AQV+
Subjt: ---------------------------------------SPMDSVAQVWN--------------------------------------------------
Query: ---SESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGI
S W+L +NL++ E+ + L L + L + PD+ WPL SS F+V+S L S G ++N + P K+K F+W ++H +
Subjt: ---SESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGI
Query: NTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMAEEDLDHMLWHCDFARS
NT D LQ R + SP C++C + E HLF HCSL W + + D V P +I+D+++ F F + K+
Subjt: NTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMAEEDLDHMLWHCDFARS
Query: VWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAEDTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
G LWQ +I +W ERN RIF RN+E WD I + SLWA ++ F +++I LDW
Subjt: VWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAEDTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
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| A0A438HZG5 Transposon TX1 uncharacterized 149 kDa protein | 7.0e-40 | 28.7 | Show/hide |
Query: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLS---------PMDSVAQV
K + IN+D I L DC WP YLGL LGGNP+ W P+IERI R+L W+ AY+S GR TLI + L+ + P A++
Subjt: KHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLS---------PMDSVAQV
Query: --------WN-----------------SESQAWDLG--LHQN------LNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSK
W+ S+ LG LH++ L + E+ + L L + L + PD+ +WPL SS F V+S L
Subjt: --------WN-----------------SESQAWDLG--LHQN------LNEEEVLEWASLSHLLSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSK
Query: GPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASI
G + + P K+K F+W ++H +NT D LQ R + SP C++C + E H+F HCSL + W + + DLV P +IFD+++
Subjt: GPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASI
Query: FVDHPFHSKKKTLWMAEEDLDHMLWHCDFARSVWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAE
F + F S K+ G LWQA +I +W ERN RIF RN+E
Subjt: FVDHPFHSKKKTLWMAEEDLDHMLWHCDFARSVWNAFFEIFGLQFARHRDVREMIEEFLPHPPFRDQGKFLWQAGICTIIWGLWGERNNRIFRGIERNAE
Query: DTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
WD I + SLWA +++F ++++ LDW
Subjt: DTWDFIKYSVSLWASVTRLFCNYSIDLILLDW
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| A0A438HZG5 Transposon TX1 uncharacterized 149 kDa protein | 7.3e-05 | 34.41 | Show/hide |
Query: SEEEVYLAIQSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCI
+EEE+ AI L K PG GFT+ F+ W V+K+D++ + E + SG+IN + F+ L PK L +D I ++TS + I
Subjt: SEEEVYLAIQSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCI
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| A0A438HZG5 Transposon TX1 uncharacterized 149 kDa protein | 1.2e-39 | 30.59 | Show/hide |
Query: QSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIF--VSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLG
+SLG + P GFT+ F+ W V+K+++ + + + +L +F +S + K + GIN+D + L DC WP YLGL LG
Subjt: QSLGSSKPPGLGGFTVEFFRHSWSVVKQDIMAIMHEFYNSGVINVALKPIF--VSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLG
Query: GNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLSPMDSVAQVWN-----------------SESQAWDLGLHQNLNEEEVLEWASLSHL
GNPK W P+IERI +L W+ AY+S GGR TLI + L+ L P +A + + +W+L +NL++ ++ + L
Subjt: GNPKLSSLWQPMIERIQRKLHNWKYAYISKGGRYTLIHATLSSLSPMDSVAQVWN-----------------SESQAWDLGLHQNLNEEEVLEWASLSHL
Query: LSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHI
L + L + PD+ +WPL SS F+V+S L S G ++ ++ P K+K F+ ++H +NT D LQ R + SP C++C + E
Subjt: LSSVVLR-NAPDSWYWPLDSSHAFTVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHI
Query: HLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMA
HLF HCSL W + + D V P +I D+++ F + LW A
Subjt: HLFAHCSLASQYWSIMMEAFGWDLVLPGNIFDLLASIFVDHPFHSKKKTLWMA
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| A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein | 7.8e-39 | 29.91 | Show/hide |
Query: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
++ I+H F ++ +N+ L K + INV + + + +GH PT+YLG+ LGG P S+ W ++++IQ+KL +WKY+ +SK
Subjt: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
Query: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
GGR TLI++TL SL +P+ SV WN S W L +++ L + E W ++ L + +
Subjt: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
Query: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
W L+S++ F +V+ ++ + +S NL+ + K +PKK K F+W L HG INTAD+LQ+R+ ++ SP+WC MC + ED HLF HC
Subjt: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
Query: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
+ Q WS W+ P ++ L+ +I
Subjt: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
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| A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein | 7.8e-39 | 29.91 | Show/hide |
Query: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
++ I+H F ++ +N+ L K + INV + + + +GH PT+YLG+ LGG P S+ W ++++IQ+KL +WKY+ +SK
Subjt: DIMAIMHEFYNSGVINVALKPIFVSSQRELTPKHELLGINVDDLEIEVLTSKFDCIQGHWPTTYLGLLLGGNPKLSSLWQPMIERIQRKLHNWKYAYISK
Query: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
GGR TLI++TL SL +P+ SV WN S W L +++ L + E W ++ L + +
Subjt: GGRYTLIHATLSSL------------------------SPMD---------------SVAQVWNSESQAWDLGLHQNLNEEEVLEWASLSHLLSSVVLRN
Query: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
W L+S++ F +V+ ++ + +S NL+ + K +PKK K F+W L HG INTAD+LQ+R+ ++ SP+WC MC + ED HLF HC
Subjt: APDSWYWPLDSSHAF---TVRSLMEDLVLSKGPTRNNLFSMIKKEHYPKKIKIFLWELSHGGINTADKLQRRMSHFFQSPSWCVMCCANMEDHIHLFAHC
Query: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
+ Q WS W+ P ++ L+ +I
Subjt: SLASQYWSIMMEAFGWDLVLPGNIFDLLASI
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