CuGenDBv2

Gene ID	Spg007718
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Eukaryotic translation initiation factor 5A
Genome location	scaffold2:1423151..1426231
RNA-Seq Expression	Spg007718
Synteny	Spg007718
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0045901 - positive regulation of translational elongation (biological process) GO:0045905 - positive regulation of translational termination (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0003746 - translation elongation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR001884 - Translation elongation factor IF5A-like IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR019769 - Translation elongation factor, IF5A, hypusine site IPR020189 - Translation elongation factor, IF5A C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

PSS08119.1 Eukaryotic translation initiation factor 5A-2 [Actinidia chinensis var. chinensis]

6.0e-66

97.64

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

XP_004146682.1 eukaryotic translation initiation factor 5A-2 [Cucumis sativus]

6.0e-66

98.43

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

XP_008443857.1 PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo]

1.6e-66

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

XP_022135162.1 eukaryotic translation initiation factor 5A-2-like [Momordica charantia]

3.5e-66

98.43

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDL+LPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

XP_022930431.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata]

1.6e-66

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9T8 Eukaryotic translation initiation factor 5A

7.6e-67

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

A0A5A7T0H1 Eukaryotic translation initiation factor 5A

7.6e-67

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

A0A6J1C1W6 Eukaryotic translation initiation factor 5A

1.7e-66

98.43

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDL+LPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

A0A6J1EQX3 Eukaryotic translation initiation factor 5A

7.6e-67

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

A0A6J1I076 Eukaryotic translation initiation factor 5A

7.6e-67

99.21

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

SwissProt top hits

e value

%identity

Alignment

P56333 Eukaryotic translation initiation factor 5A-1/2

3.6e-66

95.28

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDD LL QV
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

P69039 Eukaryotic translation initiation factor 5A-1

3.6e-66

94.49

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDDNLL  +
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

Q9AXJ4 Eukaryotic translation initiation factor 5A

9.6e-67

94.49

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKTFPQQAGTIRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTE GNTKDDLRLPTD+NLL+Q+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

Q9AXQ3 Eukaryotic translation initiation factor 5A-4

2.8e-66

95.28

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIFN KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTENGNTKDDLRLPTDD LL QV
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

Q9AXQ5 Eukaryotic translation initiation factor 5A-2

7.3e-67

96.06

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKTFPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLTE+GNTKDDLRLPTD+NLL QV
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

Arabidopsis top hits

e value

%identity

Alignment

AT1G13950.1 eukaryotic elongation factor 5A-1

1.1e-62

88.98

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+S +DAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        +VSLLT+NG+TKDDL+LP DD LL Q+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

AT1G26630.1 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

2.4e-57

81.1

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLT++G TKDDL+LPTDD L  Q+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

AT1G26630.2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

2.4e-57

81.1

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLT++G TKDDL+LPTDD L  Q+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

AT1G69410.1 eukaryotic elongation factor 5A-3

6.8e-60

85.83

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF+S +DAGASKT+PQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQV
        FVSLLT+NG+TKDDL+LPTD+ LLTQ+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAATGCGGGAGGAAAGCCGATTACTTCGTCGTCTTCAGAAAGGGAACATTGAGAACAGTGCGTGTGAGAGCAAGAGAGAAAAAGGGCCTGAAATCGAAGAGGGACA
GAGCGGCGGTGCAGCGATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCGTCCAAGACTTTCCCTCAGCAAGCTGGAACCATTCGCAAAAATGGCT
ACATCGTAATCAAGAACAGGCCCTGCAAGGTTGTTGAAGTTTCCACTTCAAAAACTGGGAAGCATGGACATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGA
AAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTTAATCGTACTGACTATCAGTTGATCGATATATCTGAAGATGGTTTTGTCAGTCTGCT
GACTGAAAATGGAAACACTAAGGATGACCTGAGGCTTCCCACCGATGATAATCTGCTTACGCAGGTATACAAGCGACCTTCGAGTCATTACTCTGTAGCTTTCTGCAACG
TTGTAAATCGTCTCATTTATTTTCATGCCAATAGCTTAAAGATGGGTTCGCTGAAGGAAAAGATCTTGTCCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGMREESRLLRRLQKGNIENSACESKREKGPEIEEGQSGGAAMSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNG
KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQVYKRPSSHYSVAFCNVVNRLIYFHANSLKMGSLKEKILS

Spg007718 (gene) of Sponge gourd (cylindrica) v1 genome