; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007822 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007822
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationscaffold4:9244083..9244697
RNA-Seq ExpressionSpg007822
SyntenySpg007822
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572450.1 Protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.0e-8176.39Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYENA+HL PNSDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD-------------EDEDASSNPNIHADQKEDGR
        KRGSVIESSPLM IRNKYLHLM  VKED KT +EH  TR  KQEQKEGSDDGSGK+NEA+L +S D+             EDEDASSN NI AD+KEDGR
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD-------------EDEDASSNPNIHADQKEDGR

Query:  -KRHVDFKENAARNRV
         KRHVD KEN+ R+R+
Subjt:  -KRHVDFKENAARNRV

KAG7012049.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-8075.93Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYENA+HL PNSDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD-------------EDEDASSNPNIHADQKEDGR
        KRGSVIESSPLM IRNKYLHLM  VKED KT +EH  TR  KQEQKEGSDDGSGK+NEA+L +S D+             EDE+ASSN NI AD+KEDGR
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD-------------EDEDASSNPNIHADQKEDGR

Query:  -KRHVDFKENAARNRV
         KRHVD KEN+ R+R+
Subjt:  -KRHVDFKENAARNRV

XP_022952527.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]5.5e-8076.89Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPY NA+HL PNSDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD---------EDEDASSNPNIHADQKEDGR-KRH
        KRGSVIESSPLM IRNKYLHLM  VKED KT +EH  TR  KQEQKEGSDDGSGK+NEA+L +S D+         EDE+ASSN NI AD+KEDGR KRH
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD---------EDEDASSNPNIHADQKEDGR-KRH

Query:  VDFKENAARNRV
        VD KEN+ R+R+
Subjt:  VDFKENAARNRV

XP_022969363.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 [Cucurbita maxima]1.0e-7877.36Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYE+A+HL P+SDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED--------EDASSNPNIHADQKEDGR-KRH
        KRGSVIESSPLM IRNKYLHLM  VKED KT  +EH  TR  KQEQKEGSDDGSGK+NEA+L +SS +ED        EDASSN NI AD+KEDGR KRH
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED--------EDASSNPNIHADQKEDGR-KRH

Query:  VDFKENAARNRV
        VD KENA R+R+
Subjt:  VDFKENAARNRV

XP_023554109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]1.0e-8178.14Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYENA+HL PNSDESDKW+VAILHE LHMLITKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD------------EDEDASSNPNIHADQKEDG-R
        KRGSVIESSPLM IRNKYLHLM  VKEDGKT +EH  TR  KQEQKEGSDDGSGK+NEA+L +SSDD            EDEDASSN NI AD+KEDG  
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD------------EDEDASSNPNIHADQKEDG-R

Query:  KRHVDFKENAARNRV
        KR+VD KENA R+R+
Subjt:  KRHVDFKENAARNRV

TrEMBL top hitse value%identityAlignment
A0A6J1D3S2 protein ROOT PRIMORDIUM DEFECTIVE 19.5e-7877.94Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYENASHLSP+SDESDKW VAILHELLHMLI KK EKE IL IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+GY
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSNPNIHADQKE--DGRKRHVDFKENAA
        KRGSVIE+SPL+NIRNKYLHLM  VKED KT TE   T   K+E+KE SDD + K+NEA+L DSSD+E ED SSN N  AD+KE   GR+RHVDF+EN  
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSNPNIHADQKE--DGRKRHVDFKENAA

Query:  RNRV
        RNRV
Subjt:  RNRV

A0A6J1GKN4 protein ROOT PRIMORDIUM DEFECTIVE 12.7e-8076.89Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPY NA+HL PNSDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD---------EDEDASSNPNIHADQKEDGR-KRH
        KRGSVIESSPLM IRNKYLHLM  VKED KT +EH  TR  KQEQKEGSDDGSGK+NEA+L +S D+         EDE+ASSN NI AD+KEDGR KRH
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDD---------EDEDASSNPNIHADQKEDGR-KRH

Query:  VDFKENAARNRV
        VD KEN+ R+R+
Subjt:  VDFKENAARNRV

A0A6J1HW55 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X31.5e-7875.93Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYE+A+HL P+SDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED------------EDASSNPNIHADQKEDGR
        KRGSVIESSPLM IRNKYLHLM  VKED KT  +EH  TR  KQEQKEGSDDGSGK+NEA+L +SS +ED            EDASSN NI AD+KEDGR
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED------------EDASSNPNIHADQKEDGR

Query:  -KRHVDFKENAARNRV
         KRHVD KENA R+R+
Subjt:  -KRHVDFKENAARNRV

A0A6J1HXK3 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X27.2e-7873.87Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYE+A+HL P+SDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED------------------EDASSNPNIHAD
        KRGSVIESSPLM IRNKYLHLM  VKED KT  +EH  TR  KQEQKEGSDDGSGK+NEA+L +SS +ED                  EDASSN NI AD
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED------------------EDASSNPNIHAD

Query:  QKEDGR-KRHVDFKENAARNRV
        +KEDGR KRHVD KENA R+R+
Subjt:  QKEDGR-KRHVDFKENAARNRV

A0A6J1I0R6 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X45.0e-7977.36Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        MDKKFKKWVD+WQKLPYISPYE+A+HL P+SDESDKW+VAILHE LHML+TKKTEKE +L IGEYFGLRSRFKRALLHH GIFYLSSK GTYTVVLK+ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED--------EDASSNPNIHADQKEDGR-KRH
        KRGSVIESSPLM IRNKYLHLM  VKED KT  +EH  TR  KQEQKEGSDDGSGK+NEA+L +SS +ED        EDASSN NI AD+KEDGR KRH
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDED--------EDASSNPNIHADQKEDGR-KRH

Query:  VDFKENAARNRV
        VD KENA R+R+
Subjt:  VDFKENAARNRV

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic2.6e-0822.66Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        + K   + +  ++ + YISPY++ SHL   + E +K    ++HELL +   K+T  +++    E F    + +  L+ H  +FY+S K    +V L++ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVK----------EDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSN-------PNIHADQ
        +   +I+  PL  ++ K   L+ + +          E+G+ +  + SD    ++E++  +++ S      +  D  +D+D D + +       PN   D 
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVK----------EDGKTI-TEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSN-------PNIHADQ

Query:  KED
        +++
Subjt:  KED

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic5.3e-0925.68Show/hide
Query:  WQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRGSVIESSPL
        ++++PYISPY + SHL   SDE +K    ++HE+L + + K+T  +++    E F      +  ++ H  +FY+S K    +V L++ YK   ++E + L
Subjt:  WQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRGSVIESSPL

Query:  MNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSNPNIHADQKEDGRKRHVDFK
        + ++ K   L+ + +   +             E+ EG  +GS +  +    +  DDEDE  S   ++ ++    G K   D++
Subjt:  MNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSNPNIHADQKEDGRKRHVDFK

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic4.8e-1027.27Show/hide
Query:  VDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRGSVIES
        V  ++++PYISPY + SHL   S E +K    ++HE+L + + K+T  +++    E F      +  L+ H  +FY+S K    +V L++ YK   ++E 
Subjt:  VDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRGSVIES

Query:  SPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDAS
        S L+ ++ K   L+ + +   + +   S+  +      +   +G         SD  DDEDE  S
Subjt:  SPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDAS

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 17.1e-1436.43Show/hide
Query:  KKFKKWVDDWQKLPYISPYENASHLSPNSDES----DKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTY----TV
        K F+  V  WQ+LPY SPYE+ S     S E+    +K +VA +HELL + + KK   E I        L  + K  LL H GIFY+S++ G Y    TV
Subjt:  KKFKKWVDDWQKLPYISPYENASHLSPNSDES----DKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTY----TV

Query:  VLKQGYKRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITE
         L++GYKRG ++E + +   R +   L+ +     K   E
Subjt:  VLKQGYKRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITE

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial2.4e-2240Show/hide
Query:  KFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRG
        K + W+ ++QKLPY+SPY++ S L P+SD ++K  V  LHELL + +    E++ +LC+ ++FGL  +  +A   H  IFYLS K  T T +L++ Y+  
Subjt:  KFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRG

Query:  SVIESSPLMNIRNKYLHLMK
        + +E+ P++ +R KY+ LMK
Subjt:  SVIESSPLMNIRNKYLHLMK

Arabidopsis top hitse value%identityAlignment
AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein6.1e-4551.06Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        +DKK KKW+DDWQKLPYISPYENA HLS  SDESDKW  A+LHE++++ ++KK EK+ IL +GE+ GLRSRFKR L +H GIFYLSSK+ T+TVVL+ GY
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSD-DGSGKKNEAKLSDSSDDEDED--ASSNPNIHADQKED
        KRG +IES+ L+  RN+Y+ LM  VK+D K ++  S   +  + + E  D D   + ++   SD  DD   D       +   DQ +D
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSD-DGSGKKNEAKLSDSSDDEDED--ASSNPNIHADQKED

AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein1.3e-2336.42Show/hide
Query:  KKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKR
        KK K W+D++QKLPYISPY++ S++ P SD  +K  VA+LHELL + I KKT++  +  +     +  +F R    + GIFYLS K  T TV+LK+GY+R
Subjt:  KKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKR

Query:  GSVIESSPLMNIRNKYLHLMK---IVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDA
        G +++  PL  +R+K+ H+M+   + +  G  +    +   L  ++ E   +  G + E  +  S  +ED +A
Subjt:  GSVIESSPLMNIRNKYLHLMK---IVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDA

AT3G58520.2 Ubiquitin carboxyl-terminal hydrolase family protein1.3e-2336.42Show/hide
Query:  KKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKR
        KK K W+D++QKLPYISPY++ S++ P SD  +K  VA+LHELL + I KKT++  +  +     +  +F R    + GIFYLS K  T TV+LK+GY+R
Subjt:  KKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKR

Query:  GSVIESSPLMNIRNKYLHLMK---IVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDA
        G +++  PL  +R+K+ H+M+   + +  G  +    +   L  ++ E   +  G + E  +  S  +ED +A
Subjt:  GSVIESSPLMNIRNKYLHLMK---IVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDA

AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein4.2e-3849.02Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        + K+ K WV+ WQ LPYISPYENA HL   SD+++KW VA+LHELL +L++KKTE +N++C+GEY G   RFK+AL+HH GIFY+S K+ T TVVL++ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTR-NLKQEQKEGSDDG
         +  ++E  PLM IR++Y++LM       K    H   R N K+   +  +DG
Subjt:  KRGSVIESSPLMNIRNKYLHLMKIVKEDGKTITEHSDTR-NLKQEQKEGSDDG

AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein2.6e-2743.44Show/hide
Query:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY
        + +K  +W+ +WQ+LPY SPY +ASHL P +D S+K  V + HELLH+ I KKTE++N+  + + F L  +F +    H GIFY+S K  T TV+L++ Y
Subjt:  MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGY

Query:  KRGSVIESSPLMNIRNKYLHLM
         R  +IE  PL+ +R K+ ++M
Subjt:  KRGSVIESSPLMNIRNKYLHLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGAAGTTCAAGAAGTGGGTGGATGATTGGCAAAAGCTACCTTACATTTCTCCATATGAAAATGCATCACATCTCTCTCCTAATAGTGATGAATCTGATAAGTG
GACTGTTGCGATTTTACATGAGCTTCTTCATATGCTCATCACGAAGAAAACTGAGAAAGAAAACATACTGTGCATAGGTGAGTACTTTGGTCTTCGGTCAAGGTTTAAGA
GAGCATTGCTTCACCATCTGGGGATATTCTACCTATCAAGTAAGGTTGGAACCTACACAGTTGTCTTAAAACAAGGGTATAAGAGGGGTTCCGTTATTGAGAGTAGCCCC
TTGATGAACATTAGAAACAAGTACCTTCACCTTATGAAAATAGTGAAGGAAGACGGTAAAACAATAACCGAACATAGCGATACTCGTAACCTGAAGCAAGAACAGAAAGA
AGGGTCAGATGATGGATCTGGAAAAAAGAATGAAGCTAAATTATCTGACTCCTCGGATGATGAAGATGAAGATGCAAGTAGTAATCCTAATATCCATGCAGATCAAAAAG
AGGATGGACGTAAGAGACATGTTGATTTCAAAGAAAATGCTGCTAGAAACAGGGTAACAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGAAGTTCAAGAAGTGGGTGGATGATTGGCAAAAGCTACCTTACATTTCTCCATATGAAAATGCATCACATCTCTCTCCTAATAGTGATGAATCTGATAAGTG
GACTGTTGCGATTTTACATGAGCTTCTTCATATGCTCATCACGAAGAAAACTGAGAAAGAAAACATACTGTGCATAGGTGAGTACTTTGGTCTTCGGTCAAGGTTTAAGA
GAGCATTGCTTCACCATCTGGGGATATTCTACCTATCAAGTAAGGTTGGAACCTACACAGTTGTCTTAAAACAAGGGTATAAGAGGGGTTCCGTTATTGAGAGTAGCCCC
TTGATGAACATTAGAAACAAGTACCTTCACCTTATGAAAATAGTGAAGGAAGACGGTAAAACAATAACCGAACATAGCGATACTCGTAACCTGAAGCAAGAACAGAAAGA
AGGGTCAGATGATGGATCTGGAAAAAAGAATGAAGCTAAATTATCTGACTCCTCGGATGATGAAGATGAAGATGCAAGTAGTAATCCTAATATCCATGCAGATCAAAAAG
AGGATGGACGTAAGAGACATGTTGATTTCAAAGAAAATGCTGCTAGAAACAGGGTAACAGGGTAA
Protein sequenceShow/hide protein sequence
MDKKFKKWVDDWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLITKKTEKENILCIGEYFGLRSRFKRALLHHLGIFYLSSKVGTYTVVLKQGYKRGSVIESSP
LMNIRNKYLHLMKIVKEDGKTITEHSDTRNLKQEQKEGSDDGSGKKNEAKLSDSSDDEDEDASSNPNIHADQKEDGRKRHVDFKENAARNRVTG