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Spg007829 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007829
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold4:8607657..8610556
RNA-Seq ExpressionSpg007829
SyntenySpg007829
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149380.1 uncharacterized protein LOC111017810 [Momordica charantia]1.9e-1747.79Show/hide
Query:  GGAEVQGDEANAQQGEDPHVPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYL
        GG    G +A A QG    VP V PQ+ L  E +Q LLDN N     Q + P       ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL
Subjt:  GGAEVQGDEANAQQGEDPHVPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYL

Query:  DCEDRLKVRGAIF
         C +  KVRGA+F
Subjt:  DCEDRLKVRGAIF
XP_022155341.1 uncharacterized protein LOC111022474 [Momordica charantia]4.3e-1750Show/hide
Query:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        VP V PQ+ L  E +Q LLDN N     Q + P       ++ Q IRDFKR+GPP FNG S+  TA E+WV +LEA++ YL C D  KVRGA+F
Subjt:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]1.0e-1852.04Show/hide
Query:  DPHVPPVIP-QMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        D +VPPV+P ++VL  E +Q LLDN N     Q + P  G    ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL C D  KVRGA+F
Subjt:  DPHVPPVIP-QMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]1.5e-1751.06Show/hide
Query:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        VP V PQ+ L  E +Q LLDN N     Q + P       D+ Q IRDFKR+GPP FNG S+  TA E+WV +LEA++ YL C D  KVRGA+F
Subjt:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
XP_022158645.1 uncharacterized protein LOC111025102 [Momordica charantia]4.3e-1750.56Show/hide
Query:  PQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        PQ+ L  E +Q LLDN N+    Q + P       ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL C D  KVRGA+F
Subjt:  PQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
TrEMBL top hitse value%identityAlignment
A0A6J1D5J7 uncharacterized protein LOC1110178109.3e-1847.79Show/hide
Query:  GGAEVQGDEANAQQGEDPHVPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYL
        GG    G +A A QG    VP V PQ+ L  E +Q LLDN N     Q + P       ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL
Subjt:  GGAEVQGDEANAQQGEDPHVPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYL

Query:  DCEDRLKVRGAIF
         C +  KVRGA+F
Subjt:  DCEDRLKVRGAIF
A0A6J1DNV8 uncharacterized protein LOC1110229254.9e-1952.04Show/hide
Query:  DPHVPPVIP-QMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        D +VPPV+P ++VL  E +Q LLDN N     Q + P  G    ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL C D  KVRGA+F
Subjt:  DPHVPPVIP-QMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
A0A6J1DRF5 uncharacterized protein LOC1110224742.1e-1750Show/hide
Query:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        VP V PQ+ L  E +Q LLDN N     Q + P       ++ Q IRDFKR+GPP FNG S+  TA E+WV +LEA++ YL C D  KVRGA+F
Subjt:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
A0A6J1DTA8 uncharacterized protein LOC1110241147.1e-1851.06Show/hide
Query:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        VP V PQ+ L  E +Q LLDN N     Q + P       D+ Q IRDFKR+GPP FNG S+  TA E+WV +LEA++ YL C D  KVRGA+F
Subjt:  VPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
A0A6J1DWE6 uncharacterized protein LOC1110251022.1e-1750.56Show/hide
Query:  PQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
        PQ+ L  E +Q LLDN N+    Q + P       ++ Q IRDFKR+GPP FNG S+  TAAE+WV +LEA++ YL C D  KVRGA+F
Subjt:  PQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAMFDYLDCEDRLKVRGAIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTTGTTCCCCATGGTCGTAGACTTAGAGTTCGAGTAGGTGGAGCGGAAGTTCAAGGTGATGAAGCTAACGCCCAACAGGGAGAAGACCCTCATGTCCCTCCTGT
TATTCCTCAAATGGTCCTCACACCAGAGACTGTACAAGCCTTGCTTGATAATATGAATCAGAGGAACGAAAGGCAACCACGAAATCCACATTTGGGTCCTGCTGTATCAG
ATGACTCCCAACTCATAAGAGATTTTAAGCGCTATGGACCTCCAACTTTTAATGGTCGTTCAAAGGAAGCCACTGCGGCAGAGCAATGGGTCGTAGACCTTGAAGCCATG
TTCGACTACCTGGATTGTGAAGATCGTTTGAAGGTGAGAGGAGCAATCTTCTGTTGGGTTTTATGCCCTAAAACTCCTGGTGTTACAGACACTCGTGAAGGACTAACTAG
TCGATATTGGTCTATATCCGTAGACACAGAAAATATGTCTGCAGTGAGAAGAGTGCAACTGTCCATTAGGTCCCACTGCGATCATAAGACAAAGGAGGCTGTTGCGTTTT
GTTCGTTGGAGCATCGTTGGCGACGAACGGTCAAGTCTACAACGGAGCAATCGCCGCTGAAATCGAGGCCAAAACCGAAGAAAACACTGCTGTTTTGCCCAGATTCTGCC
TCCAGACGCAACAGCGTCAGGACGTTACCTCAACAGCGTCTCGACGCTGTCTCAATACCGCAGGCGCCAGATATGGAAAGCGCACAGCGTCGAGACGCTGTCACGATGGC
GGCGCGCATTAGGGCTTCAACAGGCGCGGTTCAAGCTGTGGGCGGTCCGGTTCGGACCGGTTCGGCTGGGCTGGGACCTATTTGGTTCGGTTCAGCCAATTTTTTGCATG
GTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTTGTTCCCCATGGTCGTAGACTTAGAGTTCGAGTAGGTGGAGCGGAAGTTCAAGGTGATGAAGCTAACGCCCAACAGGGAGAAGACCCTCATGTCCCTCCTGT
TATTCCTCAAATGGTCCTCACACCAGAGACTGTACAAGCCTTGCTTGATAATATGAATCAGAGGAACGAAAGGCAACCACGAAATCCACATTTGGGTCCTGCTGTATCAG
ATGACTCCCAACTCATAAGAGATTTTAAGCGCTATGGACCTCCAACTTTTAATGGTCGTTCAAAGGAAGCCACTGCGGCAGAGCAATGGGTCGTAGACCTTGAAGCCATG
TTCGACTACCTGGATTGTGAAGATCGTTTGAAGGTGAGAGGAGCAATCTTCTGTTGGGTTTTATGCCCTAAAACTCCTGGTGTTACAGACACTCGTGAAGGACTAACTAG
TCGATATTGGTCTATATCCGTAGACACAGAAAATATGTCTGCAGTGAGAAGAGTGCAACTGTCCATTAGGTCCCACTGCGATCATAAGACAAAGGAGGCTGTTGCGTTTT
GTTCGTTGGAGCATCGTTGGCGACGAACGGTCAAGTCTACAACGGAGCAATCGCCGCTGAAATCGAGGCCAAAACCGAAGAAAACACTGCTGTTTTGCCCAGATTCTGCC
TCCAGACGCAACAGCGTCAGGACGTTACCTCAACAGCGTCTCGACGCTGTCTCAATACCGCAGGCGCCAGATATGGAAAGCGCACAGCGTCGAGACGCTGTCACGATGGC
GGCGCGCATTAGGGCTTCAACAGGCGCGGTTCAAGCTGTGGGCGGTCCGGTTCGGACCGGTTCGGCTGGGCTGGGACCTATTTGGTTCGGTTCAGCCAATTTTTTGCATG
GTTCGTGA
Protein sequenceShow/hide protein sequence
MQVVPHGRRLRVRVGGAEVQGDEANAQQGEDPHVPPVIPQMVLTPETVQALLDNMNQRNERQPRNPHLGPAVSDDSQLIRDFKRYGPPTFNGRSKEATAAEQWVVDLEAM
FDYLDCEDRLKVRGAIFCWVLCPKTPGVTDTREGLTSRYWSISVDTENMSAVRRVQLSIRSHCDHKTKEAVAFCSLEHRWRRTVKSTTEQSPLKSRPKPKKTLLFCPDSA
SRRNSVRTLPQQRLDAVSIPQAPDMESAQRRDAVTMAARIRASTGAVQAVGGPVRTGSAGLGPIWFGSANFLHGS