; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007839 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007839
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L11
Genome locationscaffold4:8311846..8313673
RNA-Seq ExpressionSpg007839
SyntenySpg007839
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR020929 - Ribosomal protein L5, conserved site
IPR022803 - Ribosomal protein L5 domain superfamily
IPR031309 - Ribosomal protein L5, C-terminal
IPR031310 - Ribosomal protein L5, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
pir|T04865| ribosomal protein L11, cytosolic - Arabidopsis thaliana [Arabidopsis thaliana]8.5e-5797.48Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        M QASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

XP_004133951.1 60S ribosomal protein L11 isoform X1 [Cucumis sativus]4.5e-58100Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

XP_022148025.1 60S ribosomal protein L11 isoform X1 [Momordica charantia]4.5e-58100Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

XP_022930771.1 60S ribosomal protein L11-like isoform X1 [Cucurbita moschata]8.5e-5798.32Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASE+KLSN MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

XP_022952130.1 60S ribosomal protein L11 isoform X1 [Cucurbita moschata]1.0e-5799.16Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

TrEMBL top hitse value%identityAlignment
A0A1S3AVK5 60S ribosomal protein L11-like isoform X12.2e-58100Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

A0A5A7U1I5 60S ribosomal protein L11 isoform X12.2e-58100Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

A0A6J1D1S0 60S ribosomal protein L11 isoform X12.2e-58100Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

A0A6J1GKX0 60S ribosomal protein L11 isoform X14.9e-5899.16Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

A0A6J1JN19 60S ribosomal protein L11-like isoform X14.1e-5798.32Show/hide
Query:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
        MAQASE+KLSN MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF
Subjt:  MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNF

Query:  SDTGCFGFGIQEHIDLGIK
        SDTGCFGFGIQEHIDLGIK
Subjt:  SDTGCFGFGIQEHIDLGIK

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L112.3e-5796.55Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+T
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

P42794 60S ribosomal protein L11-21.2e-5898.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

P42795 60S ribosomal protein L11-11.2e-5898.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

P46287 60S ribosomal protein L113.6e-5897.41Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

Q0DK10 60S ribosomal protein L112.3e-5796.55Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+T
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A8.8e-6098.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

AT3G58700.1 Ribosomal L5P family protein8.8e-6098.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

AT4G18730.1 ribosomal protein L16B8.8e-6098.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK

AT5G45775.1 Ribosomal L5P family protein8.5e-5598.13Show/hide
Query:  MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQE
        MRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQE
Subjt:  MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQE

Query:  HIDLGIK
        HIDLGIK
Subjt:  HIDLGIK

AT5G45775.2 Ribosomal L5P family protein8.8e-6098.28Show/hide
Query:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
        ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT
Subjt:  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDT

Query:  GCFGFGIQEHIDLGIK
        GCFGFGIQEHIDLGIK
Subjt:  GCFGFGIQEHIDLGIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGATATTAAGGTGCAGAAACTCGTCCTCAATATCTCAGTCGGTGAGAGCGGAGATCGGCTTACCAGAGC
TGCTAAGGTGCTTGAGCAACTGAGCGGCCAGAGTCCTGTGTTCTCTAAAGCTAGATACACTGTTCGTTCATTTGGAATCAGACGTAATGAGAAGATTGCTTGCTATGTCA
CCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGTTGAAGGTCAAGGAGTACGAGTTGCTCCGTAGGAACTTCAGTGACACTGGATGCTTTGGCTTCGGTATT
CAGGAGCACATTGATCTTGGAATCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGATATTAAGGTGCAGAAACTCGTCCTCAATATCTCAGTCGGTGAGAGCGGAGATCGGCTTACCAGAGC
TGCTAAGGTGCTTGAGCAACTGAGCGGCCAGAGTCCTGTGTTCTCTAAAGCTAGATACACTGTTCGTTCATTTGGAATCAGACGTAATGAGAAGATTGCTTGCTATGTCA
CCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGTTGAAGGTCAAGGAGTACGAGTTGCTCCGTAGGAACTTCAGTGACACTGGATGCTTTGGCTTCGGTATT
CAGGAGCACATTGATCTTGGAATCAAGTAA
Protein sequenceShow/hide protein sequence
MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI
QEHIDLGIK