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Spg007845 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007845
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCLAVATA3/ESR-RELATED 7
Genome locationscaffold4:8677334..8677609
RNA-Seq ExpressionSpg007845
SyntenySpg007845
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039617 - CLAVATA3/ESR (CLE)-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061638.1 hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa]4.7e-2372.53Show/hide
Query:  LRFNTKLAPLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP
        LR N  LAPLMAVLFMVMLV A A RHA+  PW  +E      SS  MIMR+ GYSK QMEHLRRLSSSS ARY PGGPDSQHHSQPPRLP
Subjt:  LRFNTKLAPLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP

KAE8647339.1 hypothetical protein Csa_003556, partial [Cucumis sativus]1.0e-1766.29Show/hide
Query:  LRFNTKLA-PLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPP
        LRFN  LA PLMAVLFM MLV A    HA+   W  +E      SSS M+MR+ GYSK QMEHLRRLSSSS  RY PGGPDSQHHSQPP
Subjt:  LRFNTKLA-PLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPP

KAG6572409.1 hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2268.69Show/hide
Query:  ANNLRFNTKLAPLMAVLFMVMLVVAVAGRHASPPWPEK----EGGG-----SSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP
        A + RFN K APL AV+FMVMLV A AGRHA P   E+    EGGG     SSS MIMRRLGY+KSQMEHLRRLSSS+ ARY PGGPDSQHHS+ PR P
Subjt:  ANNLRFNTKLAPLMAVLFMVMLVVAVAGRHASPPWPEK----EGGG-----SSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP

KAG6589262.1 hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2674.16Show/hide
Query:  NLRFNTKLAPLMAVLFMVMLVVAVAGRHASPPWPEKE-GGGSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP
        NLRF++KLAP MAVLF+ ML+V VAGRHA+PPW  +E    SSSIMIMR+ GYSK+QMEHL+RLSSS+  RYTPGGPDSQHHS PPRLP
Subjt:  NLRFNTKLAPLMAVLFMVMLVVAVAGRHASPPWPEKE-GGGSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP

TrEMBL top hitse value%identityAlignment
A0A0A0KGI4 Uncharacterized protein6.9e-2067.39Show/hide
Query:  LRFNTKLA-PLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP
        LRFN  LA PLMAVLFM MLV A    HA+   W  +E      SSS M+MR+ GYSK QMEHLRRLSSSS  RY PGGPDSQHHSQPPRLP
Subjt:  LRFNTKLA-PLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP

A0A2C9UV50 Uncharacterized protein6.9e-0436.99Show/hide
Query:  VLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPR
        V+FMV L++ V    A     E       S +++R +GY++S++E+ R++   +  R +PGGPD +HHS PPR
Subjt:  VLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPR

A0A438JK32 Pentatricopeptide repeat-containing protein6.9e-0450Show/hide
Query:  SIMIMRRLGYSKSQMEHLRRLSS--SSIARYTPGGPDSQHHSQPPRLP
        S +++R LGY +S+++HL+R+S+  +   R +PGGPD QHHS+PP LP
Subjt:  SIMIMRRLGYSKSQMEHLRRLSS--SSIARYTPGGPDSQHHSQPPRLP

A0A565C1T9 Uncharacterized protein9.0e-0436.36Show/hide
Query:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHLRRLS-SSSIARYTPGGPDSQHHSQP
        A L+ V+  ++LV+ + GR         + GGS+   +++RLGY+ S+++ + +LS  + + R++PGGPD QHHS P
Subjt:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHLRRLS-SSSIARYTPGGPDSQHHSQP

A0A5D3C664 Uncharacterized protein2.3e-2372.53Show/hide
Query:  LRFNTKLAPLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP
        LR N  LAPLMAVLFMVMLV A A RHA+  PW  +E      SS  MIMR+ GYSK QMEHLRRLSSSS ARY PGGPDSQHHSQPPRLP
Subjt:  LRFNTKLAPLMAVLFMVMLVVAVAGRHASP-PWPEKEGG---GSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP

SwissProt top hitse value%identityAlignment
Q8S8N1 CLAVATA3/ESR (CLE)-related protein 71.7e-0435.9Show/hide
Query:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHL-RRLS-SSSIARYTPGGPDSQHHSQP
        A L+ V+   +LV+ + GR        K+G  +    +++RLGY+ S+++ + R LS  + + R++PGGPD QHHS P
Subjt:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHL-RRLS-SSSIARYTPGGPDSQHHSQP

Arabidopsis top hitse value%identityAlignment
AT2G31082.1 CLAVATA3/ESR-RELATED 71.2e-0535.9Show/hide
Query:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHL-RRLS-SSSIARYTPGGPDSQHHSQP
        A L+ V+   +LV+ + GR        K+G  +    +++RLGY+ S+++ + R LS  + + R++PGGPD QHHS P
Subjt:  APLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHL-RRLS-SSSIARYTPGGPDSQHHSQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATAACCTTCGTTTCAACACAAAGCTTGCTCCATTAATGGCTGTCCTTTTCATGGTGATGCTCGTCGTGGCGGTGGCCGGCCGCCATGCATCTCCGCCGTGGCC
GGAGAAGGAGGGCGGCGGCAGCAGCAGCATTATGATAATGCGTAGATTAGGTTATAGCAAAAGCCAAATGGAGCATTTGAGAAGACTTTCTTCTTCTTCCATTGCAAGAT
ACACTCCTGGAGGACCTGATTCTCAGCATCATTCTCAACCTCCTCGTTTACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATAACCTTCGTTTCAACACAAAGCTTGCTCCATTAATGGCTGTCCTTTTCATGGTGATGCTCGTCGTGGCGGTGGCCGGCCGCCATGCATCTCCGCCGTGGCC
GGAGAAGGAGGGCGGCGGCAGCAGCAGCATTATGATAATGCGTAGATTAGGTTATAGCAAAAGCCAAATGGAGCATTTGAGAAGACTTTCTTCTTCTTCCATTGCAAGAT
ACACTCCTGGAGGACCTGATTCTCAGCATCATTCTCAACCTCCTCGTTTACCTTAG
Protein sequenceShow/hide protein sequence
MANNLRFNTKLAPLMAVLFMVMLVVAVAGRHASPPWPEKEGGGSSSIMIMRRLGYSKSQMEHLRRLSSSSIARYTPGGPDSQHHSQPPRLP