; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg007871 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007871
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:8697031..8699195
RNA-Seq ExpressionSpg007871
SyntenySpg007871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589263.1 hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2375Show/hide
Query:  MEFAAVRFHSDKENLPPLSQKHFPQNPKKPI-RRRWTRKPLVDITNFFQSTTVRLS-------SVESVCLQSNSKKRKAADEICSGSAKSLRMGFR
        MEFAAVRF S KENLP LSQK FP N KKPI RRR  RKPL DITN F+S +VR S       SVESVCLQ NSKKRKAADEICSG+AKSLRMGFR
Subjt:  MEFAAVRFHSDKENLPPLSQKHFPQNPKKPI-RRRWTRKPLVDITNFFQSTTVRLS-------SVESVCLQSNSKKRKAADEICSGSAKSLRMGFR

KGN47955.1 hypothetical protein Csa_002785 [Cucumis sativus]1.0e-2352.26Show/hide
Query:  RRRQKPGRRNRGPELLP-----AHGHNPRPRPIAEADQGQGPATSILHLNP---SPPSMEFAAVRFHSDKENLPPLSQKHFPQNPKKP-IRRRWTRKPLV
        RR++K  R+ +  + LP      + H P   P          + S+L L P   SP SMEF+AVRFHSDKENLPP + K +P  PKKP IRRR  RKPL+
Subjt:  RRRQKPGRRNRGPELLP-----AHGHNPRPRPIAEADQGQGPATSILHLNP---SPPSMEFAAVRFHSDKENLPPLSQKHFPQNPKKP-IRRRWTRKPLV

Query:  DITNFFQSTTVRL--------SSVESVCLQSNSKKRKAADEICSGSAKSLRMGFR
        DITN F++ T+RL        +SVESVCLQ NS+KRKA DE+ SG+AKSLRMGFR
Subjt:  DITNFFQSTTVRL--------SSVESVCLQSNSKKRKAADEICSGSAKSLRMGFR

TrEMBL top hitse value%identityAlignment
A0A0A0KE31 Uncharacterized protein5.1e-2452.26Show/hide
Query:  RRRQKPGRRNRGPELLP-----AHGHNPRPRPIAEADQGQGPATSILHLNP---SPPSMEFAAVRFHSDKENLPPLSQKHFPQNPKKP-IRRRWTRKPLV
        RR++K  R+ +  + LP      + H P   P          + S+L L P   SP SMEF+AVRFHSDKENLPP + K +P  PKKP IRRR  RKPL+
Subjt:  RRRQKPGRRNRGPELLP-----AHGHNPRPRPIAEADQGQGPATSILHLNP---SPPSMEFAAVRFHSDKENLPPLSQKHFPQNPKKP-IRRRWTRKPLV

Query:  DITNFFQSTTVRL--------SSVESVCLQSNSKKRKAADEICSGSAKSLRMGFR
        DITN F++ T+RL        +SVESVCLQ NS+KRKA DE+ SG+AKSLRMGFR
Subjt:  DITNFFQSTTVRL--------SSVESVCLQSNSKKRKAADEICSGSAKSLRMGFR

A0A1Q3C6Z4 Uncharacterized protein (Fragment)7.6e-0439.05Show/hide
Query:  MEFAAVRFHSDKENLPPLSQK-------HFPQNPKKPIRRRWTRKPLVDITNFFQSTTVRLSSVESVCL----------QSNSKKRKAADEICSGSAKSL
        ME   +  + +KEN+PP S K       + P   K P  +R  RKPL DITN F ++    S+ ES+ L            N++KRKA   + S S+KSL
Subjt:  MEFAAVRFHSDKENLPPLSQK-------HFPQNPKKPIRRRWTRKPLVDITNFFQSTTVRLSSVESVCL----------QSNSKKRKAADEICSGSAKSL

Query:  RMGFR
        RMGFR
Subjt:  RMGFR

A0A2C9URL6 Uncharacterized protein9.0e-0542.48Show/hide
Query:  MEFAA--VRFHSDKENLPPLSQKHFPQNP--------KKPIRRRWTRKPLVDITNFFQSTTV--------RLSSVESVCLQSNSKKRKAADE-------I
        MEF A     HS+KEN+PP S K  P NP        KK  RRR  R+PL DIT F++S+           LS++      SNSKKRKA+D+       +
Subjt:  MEFAA--VRFHSDKENLPPLSQKHFPQNP--------KKPIRRRWTRKPLVDITNFFQSTTV--------RLSSVESVCLQSNSKKRKAADE-------I

Query:  CSGSAKSLRMGFR
           S+KSLR GFR
Subjt:  CSGSAKSLRMGFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTAGGCCTGCCACGGCAGGCCTAGCCTGCTCGGCCTCGGCCAATGGCCGAGGCCGAGCACACCTGCAGCAGGATAGGCCCACAATTAGTCGGGTCCGAAGACG
ACAGAAGCCAGGCCGACGAAACAGAGGGCCGGAGCTTCTACCGGCCCACGGGCATAATCCTCGGCCTCGGCCCATTGCCGAGGCCGACCAGGGCCAAGGGCCCGCCACTT
CGATTCTCCATCTCAATCCTTCGCCGCCGTCCATGGAGTTCGCCGCCGTTCGATTTCACTCCGACAAGGAAAATCTCCCACCGCTTTCCCAGAAGCACTTCCCCCAAAAT
CCCAAGAAACCCATTAGAAGGAGATGGACTCGAAAGCCGCTTGTCGATATAACCAATTTCTTTCAAAGCACTACCGTTCGGTTGAGCTCTGTTGAATCGGTTTGTTTGCA
GTCGAATTCGAAGAAGAGGAAGGCTGCCGATGAGATTTGTTCTGGAAGTGCCAAATCGCTCAGAATGGGATTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTAGGCCTGCCACGGCAGGCCTAGCCTGCTCGGCCTCGGCCAATGGCCGAGGCCGAGCACACCTGCAGCAGGATAGGCCCACAATTAGTCGGGTCCGAAGACG
ACAGAAGCCAGGCCGACGAAACAGAGGGCCGGAGCTTCTACCGGCCCACGGGCATAATCCTCGGCCTCGGCCCATTGCCGAGGCCGACCAGGGCCAAGGGCCCGCCACTT
CGATTCTCCATCTCAATCCTTCGCCGCCGTCCATGGAGTTCGCCGCCGTTCGATTTCACTCCGACAAGGAAAATCTCCCACCGCTTTCCCAGAAGCACTTCCCCCAAAAT
CCCAAGAAACCCATTAGAAGGAGATGGACTCGAAAGCCGCTTGTCGATATAACCAATTTCTTTCAAAGCACTACCGTTCGGTTGAGCTCTGTTGAATCGGTTTGTTTGCA
GTCGAATTCGAAGAAGAGGAAGGCTGCCGATGAGATTTGTTCTGGAAGTGCCAAATCGCTCAGAATGGGATTCAGATAA
Protein sequenceShow/hide protein sequence
MQARPATAGLACSASANGRGRAHLQQDRPTISRVRRRQKPGRRNRGPELLPAHGHNPRPRPIAEADQGQGPATSILHLNPSPPSMEFAAVRFHSDKENLPPLSQKHFPQN
PKKPIRRRWTRKPLVDITNFFQSTTVRLSSVESVCLQSNSKKRKAADEICSGSAKSLRMGFR