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Spg007882 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007882
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBromo domain-containing protein
Genome locationscaffold4:8929747..8930409
RNA-Seq ExpressionSpg007882
SyntenySpg007882
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4263132.1 unnamed protein product [Prunus armeniaca]1.4e-0445.16Show/hide
Query:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        +  E  +KK    E+              RE AR ALEEMER V  DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL

CAB4293782.1 unnamed protein product [Prunus armeniaca]1.4e-0445.16Show/hide
Query:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        +  E  +KK    E+              RE AR ALEEMER V  DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL

KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]1.2e-1640.31Show/hide
Query:  SSSPAPVTIK-TSIVAQAAALQTP---PSPRRAA--------RTAMLKARFAGTISKAQKQL-------------------------FGDRKEMT-----
        S+S  P+  K T+IV    A  TP    +P  A         R +MLK RFAGTI KAQ+QL                           +R+E T     
Subjt:  SSSPAPVTIK-TSIVAQAAALQTP---PSPRRAA--------RTAMLKARFAGTISKAQKQL-------------------------FGDRKEMT-----

Query:  -MKKPT---------------------------TEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
          K+PT                           TEE+R+ AR+ALEE+ER+V+ +DSHKSV+DL+RLCGWPIPYVGGF NRM Y GLYLKN
Subjt:  -MKKPT---------------------------TEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1740.7Show/hide
Query:  ISSRDLAPEAKKSSSPAPVTIKTSIVAQAAALQTP-PSPRRAA----RTAMLKARFAGTISKAQKQLFGDRK----------------------------
        + +  L  +AKK S   P T  T     A     P P+P  ++    R  +LK +FAGTI KAQ+ L  +RK                            
Subjt:  ISSRDLAPEAKKSSSPAPVTIKTSIVAQAAALQTP-PSPRRAA----RTAMLKARFAGTISKAQKQLFGDRK----------------------------

Query:  ------EMTMKKPTTEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
              E+TM K   EE+R  AR+ LEE+ER V  DDSH S+R+ +RLCG+PIPYVGGFLNRMHY GLYLK+
Subjt:  ------EMTMKKPTTEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

PQP93901.1 hypothetical protein Pyn_07298 [Prunus yedoensis var. nudiflora]1.4e-0445.16Show/hide
Query:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        +  E  +KK    E+              RE AR ALEEMER V  DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL

TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein1.7e-1132.27Show/hide
Query:  NSYANASSVKSRRVVRADLPPNATTVNATEPTKPSRVSVRDLSPKAIIAKKPRSPT--KPRGVSARDSAPKATIVKKPRSPTKRRVISSRDLAPEAKKSS
        NS  +   +K +       P  A      E T  + ++  D   +  + K   + T  K +   +        + KKP +P    +   R+   EA   +
Subjt:  NSYANASSVKSRRVVRADLPPNATTVNATEPTKPSRVSVRDLSPKAIIAKKPRSPT--KPRGVSARDSAPKATIVKKPRSPTKRRVISSRDLAPEAKKSS

Query:  SPAPVTIKTSIVAQAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGDRK-EMTMKKPTTEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWP
               K +  A A A  TP +      T  +           Q+ L+   K   T    +TEE+R  AR+ALE++ER+V+ +DSHKSV+DL+RLCGWP
Subjt:  SPAPVTIKTSIVAQAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGDRK-EMTMKKPTTEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWP

Query:  IPYVGGFLNRMHYLGLYLKN
        IP VGGF NRM Y GLYLKN
Subjt:  IPYVGGFLNRMHYLGLYLKN

A0A314XJ27 Uncharacterized protein6.8e-0545.16Show/hide
Query:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        +  E  +KK    E+              RE AR ALEEMER V  DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTISKAQKQLFG------DRKEMTMKKPTTEEL--------------RELARKALEEMERTVEFDDSHKSVRDLQRL

A0A5D3DC97 Transcription factor GTE9 isoform X45.9e-1740.31Show/hide
Query:  SSSPAPVTIK-TSIVAQAAALQTP---PSPRRAA--------RTAMLKARFAGTISKAQKQL-------------------------FGDRKEMT-----
        S+S  P+  K T+IV    A  TP    +P  A         R +MLK RFAGTI KAQ+QL                           +R+E T     
Subjt:  SSSPAPVTIK-TSIVAQAAALQTP---PSPRRAA--------RTAMLKARFAGTISKAQKQL-------------------------FGDRKEMT-----

Query:  -MKKPT---------------------------TEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
          K+PT                           TEE+R+ AR+ALEE+ER+V+ +DSHKSV+DL+RLCGWPIPYVGGF NRM Y GLYLKN
Subjt:  -MKKPT---------------------------TEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

A0A7N0T483 Bromo domain-containing protein5.2e-0529.75Show/hide
Query:  QAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGD----------------------------------------RKEMTMKKPTTEELRELARKAL
        Q  A +   SP+RA R A+LK+RFAGTI KAQ++   D                                        RK    ++   E  RE AR AL
Subjt:  QAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGD----------------------------------------RKEMTMKKPTTEELRELARKAL

Query:  EEMERTVEFDDSHKSVRDLQRLCGWPI-------------PYVGGFLNRMHYLGLYLK
        ++ME+TVEF ++  ++++++ LCG PI             P  G + N +  LGL++K
Subjt:  EEMERTVEFDDSHKSVRDLQRLCGWPI-------------PYVGGFLNRMHYLGLYLK

A0A7N0ZRN6 Bromo domain-containing protein5.2e-0529.75Show/hide
Query:  QAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGD----------------------------------------RKEMTMKKPTTEELRELARKAL
        Q  A +   SP+RA R A+LK+RFAGTI KAQ++   D                                        RK    ++   E  RE AR AL
Subjt:  QAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGD----------------------------------------RKEMTMKKPTTEELRELARKAL

Query:  EEMERTVEFDDSHKSVRDLQRLCGWPI-------------PYVGGFLNRMHYLGLYLK
        ++ME+TVEF ++  ++++++ LCG PI             P  G + N +  LGL++K
Subjt:  EEMERTVEFDDSHKSVRDLQRLCGWPI-------------PYVGGFLNRMHYLGLYLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATAATTCCTACGCCAACGCCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATTTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACGAAACC
TAGCCGAGTCAGTGTTCGCGATTTGTCACCGAAGGCGATCATAGCGAAGAAGCCGCGTTCTCCGACAAAACCTCGCGGAGTCAGTGCTCGCGATTCTGCACCGAAGGCGA
CGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATCAGTTCCCGCGATTTGGCTCCGGAGGCGAAGAAGTCGAGTTCTCCGGCACCGGTGACGATCAAAACA
TCAATCGTAGCGCAAGCTGCGGCACTGCAGACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAAGCTAGGTTCGCCGGTACGATCTCGAAAGCACAGAA
GCAGCTTTTCGGCGATAGAAAGGAAATGACGATGAAGAAACCTACGACTGAAGAACTGAGAGAATTGGCCCGAAAAGCTTTAGAGGAGATGGAGCGGACTGTTGAGTTCG
ACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGTACGTTGGTGGATTTCTGAACAGAATGCATTACCTTGGTTTATATTTGAAGAAC
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATAATTCCTACGCCAACGCCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATTTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACGAAACC
TAGCCGAGTCAGTGTTCGCGATTTGTCACCGAAGGCGATCATAGCGAAGAAGCCGCGTTCTCCGACAAAACCTCGCGGAGTCAGTGCTCGCGATTCTGCACCGAAGGCGA
CGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATCAGTTCCCGCGATTTGGCTCCGGAGGCGAAGAAGTCGAGTTCTCCGGCACCGGTGACGATCAAAACA
TCAATCGTAGCGCAAGCTGCGGCACTGCAGACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAAGCTAGGTTCGCCGGTACGATCTCGAAAGCACAGAA
GCAGCTTTTCGGCGATAGAAAGGAAATGACGATGAAGAAACCTACGACTGAAGAACTGAGAGAATTGGCCCGAAAAGCTTTAGAGGAGATGGAGCGGACTGTTGAGTTCG
ACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGTACGTTGGTGGATTTCTGAACAGAATGCATTACCTTGGTTTATATTTGAAGAAC
TAG
Protein sequenceShow/hide protein sequence
MKHNSYANASSVKSRRVVRADLPPNATTVNATEPTKPSRVSVRDLSPKAIIAKKPRSPTKPRGVSARDSAPKATIVKKPRSPTKRRVISSRDLAPEAKKSSSPAPVTIKT
SIVAQAAALQTPPSPRRAARTAMLKARFAGTISKAQKQLFGDRKEMTMKKPTTEELRELARKALEEMERTVEFDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN