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Spg007931 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg007931
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold7:28619717..28620477
RNA-Seq ExpressionSpg007931
SyntenySpg007931
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062407.1 uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa]4.9e-1366.67Show/hide
Query:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESFRSSPSTWLELYIES------------VMSGLHHVY
        MTEILS RLYGTVCTQV+IELP+PDTLPTSAES  S+ +TWLELY ES            VMSGLH V+
Subjt:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESFRSSPSTWLELYIES------------VMSGLHHVY

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.3e-1054.02Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV
        MTEILS R YGTVCTQ                 VEIELPVPDTLP+S ESF S+ STWLELY E             VMSGLH +YV
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV

KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-1165.15Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV
        MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAES  S+ STWLELY+E V
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.3e-1054.02Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV
        MTEILS R YGTVCTQ                 VEIELPVPDTLP+S ESF S+ STWLELY E             VMSGLH +YV
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-1165.15Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV
        MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAES  S+ STWLELY+E V
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV

TrEMBL top hitse value%identityAlignment
A0A5A7V638 Uncharacterized protein2.4e-1366.67Show/hide
Query:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESFRSSPSTWLELYIES------------VMSGLHHVY
        MTEILS RLYGTVCTQV+IELP+PDTLPTSAES  S+ +TWLELY ES            VMSGLH V+
Subjt:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESFRSSPSTWLELYIES------------VMSGLHHVY

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein6.5e-1154.02Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV
        MTEILS R YGTVCTQ                 VEIELPVPDTLP+S ESF S+ STWLELY E             VMSGLH +YV
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV

A0A5A7VMG9 Reverse transcriptase1.3e-1165.15Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV
        MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAES  S+ STWLELY+E V
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein6.5e-1154.02Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV
        MTEILS R YGTVCTQ                 VEIELPVPDTLP+S ESF S+ STWLELY E             VMSGLH +YV
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIE------------SVMSGLHHVYV

A0A5D3DX39 Reverse transcriptase1.3e-1165.15Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV
        MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAES  S+ STWLELY+E V
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESFRSSPSTWLELYIESV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAG
CCCCAGTACATGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCGTATAGAATGT
TTTATATCTATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAG
CCCCAGTACATGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCGTATAGAATGT
TTTATATCTATGATTAG
Protein sequenceShow/hide protein sequence
MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESFRSSPSTWLELYIESVMSGLHHVYVERFPWIPLCGVSYRMFYIYD