; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008020 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008020
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase III domain-containing protein
Genome locationscaffold4:6486863..6490396
RNA-Seq ExpressionSpg008020
SyntenySpg008020
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR014720 - Double-stranded RNA-binding domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144598.1 ribonuclease 3-like protein 3 [Cucumis sativus]5.0e-11978.89Show/hide
Query:  MEEEEHGVD-------SFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTRE
        MEE +  VD       S GG G+AVNG              S  P SL+GIEAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TRE
Subjt:  MEEEEHGVD-------SFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTRE

Query:  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFK
        QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLH KIEEF +SIE YPLHSNGMIKAPK+LADIVESTIGAVFADSN IDTVW IFK
Subjt:  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFK

Query:  ELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        EL+EPLITL T+K+HPMTELTE+CQKRSLKLEF D WEETKEI+V I+K++VGKGSYRKKLIAQNRAAK+AL NLD    + NQPCQPM
Subjt:  ELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

XP_022136054.1 ribonuclease 3-like protein 3 [Momordica charantia]3.7e-12280.63Show/hide
Query:  EEHGVDSF-----GGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSN
        EEHGV+ F        G  VN +VR+NP E     SS  PPSLE +EAIL YEFRDKRLLEEAFTD+S SPENC SFERLEYVGDSVLNFL+TREQYFSN
Subjt:  EEHGVDSF-----GGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSN

Query:  PNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEP
        P+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL  KIEEFA+ ++ YPLHSNG+IKAPKILADIVESTIGAVF DSNS+DTVWTIF+ L+EP
Subjt:  PNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEP

Query:  LITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        LITL TIKRHPMTELTEICQKR+LKLEFVD WE+TKE+QVFIDK+LVGKGSYRKKLIAQNRAAKDALNNLD +L +INQPCQPM
Subjt:  LITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

XP_022969213.1 ribonuclease 3-like protein 3 [Cucurbita maxima]4.4e-11585.83Show/hide
Query:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        S   SL+G+EAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
Subjt:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE
        KADL  KIEEF+++IE YPLHSNGMIKAPKILADIVES IGAVF DSNSIDTVWTIFK L+EPLITL T+KRHPMTELTE+CQKR+LK EFVDLWEE KE
Subjt:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE

Query:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        I V IDK+LVGKGSY KKLIAQNRAAKDAL+N   +LG+ N+PCQPM
Subjt:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

XP_023554575.1 ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]4.4e-11583.14Show/hide
Query:  EMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG
        E       S   SL+G+EAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG
Subjt:  EMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG

Query:  FHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV
        FHRYLRHNKADL  KIEEF+++IE YPLHSNG+IKAPKILADIVES IGAVF DSNSIDTVWTIFK L+EPLITL T+KRHPMTELTE+CQKR+LK EFV
Subjt:  FHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV

Query:  DLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        DLWEE KEI V IDK+LVGKGSY KKLIAQNRAAKDAL+N   +LG+ N+PCQPM
Subjt:  DLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

XP_038888348.1 ribonuclease 3-like protein 3 [Benincasa hispida]1.7e-12280.84Show/hide
Query:  MEEEEHGV-----DSFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQY
        MEEEE  V     +   G G+AVNG                   SL+GIEAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TREQY
Subjt:  MEEEEHGV-----DSFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQY

Query:  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKEL
        FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK DLH KIEEF +SIE YPLHSNGMIKAPK+LADIVESTIGAVFADSNSI+TVW IFK+L
Subjt:  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKEL

Query:  LEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        +EPLITL T+K+HPMTELTEICQKR+L LEFVD WEE KE+QVFIDK+LVGKGSYRKKLIAQNRAAKDALNNLDRVLGE NQPCQPM
Subjt:  LEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

TrEMBL top hitse value%identityAlignment
A0A0A0K1J8 RNase III domain-containing protein2.4e-11978.89Show/hide
Query:  MEEEEHGVD-------SFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTRE
        MEE +  VD       S GG G+AVNG              S  P SL+GIEAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TRE
Subjt:  MEEEEHGVD-------SFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTRE

Query:  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFK
        QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLH KIEEF +SIE YPLHSNGMIKAPK+LADIVESTIGAVFADSN IDTVW IFK
Subjt:  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFK

Query:  ELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        EL+EPLITL T+K+HPMTELTE+CQKRSLKLEF D WEETKEI+V I+K++VGKGSYRKKLIAQNRAAK+AL NLD    + NQPCQPM
Subjt:  ELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

A0A1Q3BNT8 Ribonuclease_3 domain-containing protein (Fragment)1.3e-8066.24Show/hide
Query:  LEGIEAILNYEFRDKRLLEEAFTDAS-CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        LEG+E IL Y+F +K LLEEAFT AS  SP+ C+S+ERLE+VGDSVLN L T+EQYF  PNL PG LTRLRAANVDTEKLARV+I HG HRYL H K  L
Subjt:  LEGIEAILNYEFRDKRLLEEAFTDAS-CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQV
          +I+EF Q+I  YPLHSNG++  PK+LADIVESTIGAVF DSN SID VW +FK LLEP+I++ T+KRHP+TEL E+CQK++LK++FVDLW+E+   +V
Subjt:  HTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQV

Query:  FIDKKLVGKGSY-RKKLIAQNRAAKDALNNLDRVLGE
        FID +LVG+ +Y  KK IA NRAAKDALNN+ ++L E
Subjt:  FIDKKLVGKGSY-RKKLIAQNRAAKDALNNLDRVLGE

A0A6J1C375 ribonuclease 3-like protein 31.8e-12280.63Show/hide
Query:  EEHGVDSF-----GGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSN
        EEHGV+ F        G  VN +VR+NP E     SS  PPSLE +EAIL YEFRDKRLLEEAFTD+S SPENC SFERLEYVGDSVLNFL+TREQYFSN
Subjt:  EEHGVDSF-----GGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSN

Query:  PNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEP
        P+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL  KIEEFA+ ++ YPLHSNG+IKAPKILADIVESTIGAVF DSNS+DTVWTIF+ L+EP
Subjt:  PNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEP

Query:  LITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        LITL TIKRHPMTELTEICQKR+LKLEFVD WE+TKE+QVFIDK+LVGKGSYRKKLIAQNRAAKDALNNLD +L +INQPCQPM
Subjt:  LITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

A0A6J1GKQ4 ribonuclease 3-like protein 35.2e-11484.62Show/hide
Query:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        S   SL+G+EAIL YEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHN
Subjt:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE
        KADL  KIEEF+++IE YPLHSNG+IKAPKILADIVES IGAVF DSNSIDTVWTIFK L+EPLITL T+KRHPMTELTE+CQKR+LK EFVDLWEE KE
Subjt:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE

Query:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        I V IDK+LVGKGSY KKLIAQNRAAKDAL+N   +LG+ N+PCQPM
Subjt:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

A0A6J1I0C1 ribonuclease 3-like protein 32.1e-11585.83Show/hide
Query:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        S   SL+G+EAILNYEFRDKRLLEEAFTDAS SPENCSSFERLEYVGDSVLNFL+TREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
Subjt:  SPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE
        KADL  KIEEF+++IE YPLHSNGMIKAPKILADIVES IGAVF DSNSIDTVWTIFK L+EPLITL T+KRHPMTELTE+CQKR+LK EFVDLWEE KE
Subjt:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEETKE

Query:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM
        I V IDK+LVGKGSY KKLIAQNRAAKDAL+N   +LG+ N+PCQPM
Subjt:  IQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM

SwissProt top hitse value%identityAlignment
Q69KJ0 Ribonuclease 3-like protein 31.1e-5747.52Show/hide
Query:  PPSLEGIEAILNYEFRDKRLLEEAFTDAS--CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        P  +  +E++L YEFRDK L+EEA T  S         ++ERLEY+GD+VL  +++RE + +   L PG LTRLRAANVD EKLARVA+ HG H +LRH 
Subjt:  PPSLEGIEAILNYEFRDKRLLEEAFTDAS--CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV-DLWEET
          +L  +I +F + +  YP+HSNG++  PK+L D+VES IGA++ DSN + + VW +F++L +PLI+L T+ +HP++EL E CQK    ++ V D W++ 
Subjt:  KADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV-DLWEET

Query:  KEIQVFIDKKLVGKGSY-RKKLIAQNRAAKDALNNLDRVLGE
          ++V ID ++VG+ +Y +KK IAQNRAAK AL+ L   LG+
Subjt:  KEIQVFIDKKLVGKGSY-RKKLIAQNRAAKDALNNLDRVLGE

Q6ATG6 Ribonuclease 3-like protein 23.7e-4040.43Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKI
        +E +L Y+FRD RLLEEA T  S + ++  S++RLE+VGDS L    +   Y +NP L PG L+ LRAAN+ TEKLARVA+ H  +  LR N   L   +
Subjt:  IEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKI

Query:  EEFAQSIEAYP-------LHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEE--T
         +F ++++  P        +   ++KAPK+LADIVE+   AV+ D    ++ +W + + L EP+IT  TI   P+T L E+CQK     +F   W++   
Subjt:  EEFAQSIEAYP-------LHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFVDLWEE--T

Query:  KEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNL
          + VF+  +LVG GS  +K+IA+  AA+DA   L
Subjt:  KEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNL

Q8LMR2 Endoribonuclease Dicer homolog 11.4e-3940.17Show/hide
Query:  SLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        + + ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ L+TR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L
Subjt:  SLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HTKIEEFAQSIEAYPLHSN------GMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWE
         T+I EF + ++   L         G  KAPK+L DIVES  GA+F DS      VW +F+ LL P++T  T+  HP+ EL E CQ+++  LE+      
Subjt:  HTKIEEFAQSIEAYPLHSN------GMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWE

Query:  ETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL
            ++VF+D   +G     +K +AQ  AA++AL
Subjt:  ETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL

Q9LTQ0 Ribonuclease 3-like protein 22.3e-4239.34Show/hide
Query:  SSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        SS   S+E +E ILNY+F +K LL+EA T  SC+  +  S+ERLE++GDS +   ++   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR 
Subjt:  SSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKADLHTKIEEFAQSI---EAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKR--HPMTELTEICQKRSLKLEFVD
        N   L  K++EF++++   +   +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+ LLEP++TL+ +++   P++ L ++C K   +++  +
Subjt:  NKADLHTKIEEFAQSI---EAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKR--HPMTELTEICQKRSLKLEFVD

Query:  LWEETKEIQV-FIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRV
          +    I V ++D +L+  G    K IA+  AAK+AL  L  V
Subjt:  LWEETKEIQV-FIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRV

Q9SP32 Endoribonuclease Dicer homolog 15.2e-4242.86Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ L+TR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L  +
Subjt:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK

Query:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK
        I EF + ++       +     G  KAPK+L DIVES  GA+F DS    T  W +F+ LL+P++T  T+  HP+ EL E CQ+++  LE+       T 
Subjt:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK

Query:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL
         ++VFID   VG     +K +AQ  AA++AL
Subjt:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 13.7e-4342.86Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ L+TR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L  +
Subjt:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK

Query:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK
        I EF + ++       +     G  KAPK+L DIVES  GA+F DS    T  W +F+ LL+P++T  T+  HP+ EL E CQ+++  LE+       T 
Subjt:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK

Query:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL
         ++VFID   VG     +K +AQ  AA++AL
Subjt:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL

AT1G01040.2 dicer-like 13.7e-4342.86Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ L+TR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L  +
Subjt:  GIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK

Query:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK
        I EF + ++       +     G  KAPK+L DIVES  GA+F DS    T  W +F+ LL+P++T  T+  HP+ EL E CQ+++  LE+       T 
Subjt:  IEEFAQSIE------AYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDT-VWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEF-VDLWEETK

Query:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL
         ++VFID   VG     +K +AQ  AA++AL
Subjt:  EIQVFIDKKLVGKGSYRKKLIAQNRAAKDAL

AT3G03300.1 dicer-like 22.5e-3137.72Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDAS-CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK
        +E++LNY F DK LL EA T  S   PE    ++RLE++GDSVL++L+T+  Y   P LSPG LT +R+A+V+ E  A VA+    H+++ +    LH  
Subjt:  IEAILNYEFRDKRLLEEAFTDAS-CSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTK

Query:  IEEFAQSIEAYPLHS----NGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKL----EFVDLWEET
        I       E   L S       I  PK+L D++ES  GA+F DS  + + V+   K LL  +IT  T+K HP+ ELTE+CQK   +L    +F     E 
Subjt:  IEEFAQSIEAYPLHS----NGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKL----EFVDLWEET

Query:  KEIQVFI-------DKKLVGKGSYRKKL
        K  ++         DKK+  K +Y++ L
Subjt:  KEIQVFI-------DKKLVGKGSYRKKL

AT3G20420.1 RNAse THREE-like protein 21.6e-4339.34Show/hide
Query:  SSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        SS   S+E +E ILNY+F +K LL+EA T  SC+  +  S+ERLE++GDS +   ++   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR 
Subjt:  SSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKADLHTKIEEFAQSI---EAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKR--HPMTELTEICQKRSLKLEFVD
        N   L  K++EF++++   +   +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+ LLEP++TL+ +++   P++ L ++C K   +++  +
Subjt:  NKADLHTKIEEFAQSI---EAYPLHSNGMIKAPKILADIVESTIGAVFADSN-SIDTVWTIFKELLEPLITLNTIKR--HPMTELTEICQKRSLKLEFVD

Query:  LWEETKEIQV-FIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRV
          +    I V ++D +L+  G    K IA+  AAK+AL  L  V
Subjt:  LWEETKEIQV-FIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRV

AT4G15417.1 RNAse II-like 13.8e-6451.41Show/hide
Query:  RTESSSSPPP--SLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG
        +T  S+ P     +E +E ILNY+F+DK LL +AFTDAS   +   S+E LE +GDS+LN  +  +     P  +PG LT+LRA NVDTEKLARVA+ H 
Subjt:  RTESSSSPPP--SLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG

Query:  FHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV
         + YLRH K  L  +I EF +++E YPLHSNG++K PK+LADIVESTIGA+F D NS +TVW + K LLEP+I L+ +K HPMTEL E+CQKR+LKL   
Subjt:  FHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMTELTEICQKRSLKLEFV

Query:  DLWEETKEIQVFIDKKLVGKGSYR-KKLIAQNRAAKDALNNLDRVLGEI
        D WEE +     I+ K VG G +  KK  A+N AAK+A++N  +  G++
Subjt:  DLWEETKEIQVFIDKKLVGKGSYR-KKLIAQNRAAKDALNNLDRVLGEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCACAATCCCCAAATTTTCACCATGGAAGAAGAAGAACACGGAGTAGATTCGTTCGGCGGCGCCGGCCAGGCAGTCAACGGCGAGGTACGGCAGAATCCGGCGGA
GATGAGGACCGAGTCGTCTTCGTCGCCGCCGCCGAGTCTGGAGGGAATCGAGGCGATTCTGAATTATGAGTTTCGAGATAAGAGATTGCTGGAAGAGGCTTTCACAGACG
CGTCGTGTTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTCGGCGATTCGGTGTTGAATTTTCTGATGACGAGAGAGCAATACTTCTCGAATCCGAATCTG
TCGCCTGGTTCACTGACTCGGCTCCGAGCTGCAAATGTCGACACCGAAAAGCTTGCTCGTGTTGCGATTACCCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGA
TCTTCATACAAAAATTGAAGAGTTTGCTCAAAGCATAGAGGCATATCCTTTGCATTCAAATGGGATGATCAAAGCTCCAAAAATTCTAGCCGACATTGTTGAATCAACCA
TTGGAGCTGTTTTTGCCGATAGCAACTCCATCGACACTGTTTGGACGATATTTAAAGAGCTATTGGAGCCATTGATTACTCTGAACACTATTAAAAGACATCCAATGACA
GAATTGACTGAAATTTGTCAAAAAAGAAGTCTCAAGTTGGAATTCGTGGATCTATGGGAAGAAACAAAAGAAATTCAAGTTTTTATAGACAAAAAACTTGTGGGAAAAGG
AAGCTATAGGAAAAAACTTATAGCTCAAAATAGAGCTGCAAAAGATGCTTTGAACAACTTAGATAGAGTTCTTGGAGAAATTAATCAACCTTGTCAACCTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCACAATCCCCAAATTTTCACCATGGAAGAAGAAGAACACGGAGTAGATTCGTTCGGCGGCGCCGGCCAGGCAGTCAACGGCGAGGTACGGCAGAATCCGGCGGA
GATGAGGACCGAGTCGTCTTCGTCGCCGCCGCCGAGTCTGGAGGGAATCGAGGCGATTCTGAATTATGAGTTTCGAGATAAGAGATTGCTGGAAGAGGCTTTCACAGACG
CGTCGTGTTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTCGGCGATTCGGTGTTGAATTTTCTGATGACGAGAGAGCAATACTTCTCGAATCCGAATCTG
TCGCCTGGTTCACTGACTCGGCTCCGAGCTGCAAATGTCGACACCGAAAAGCTTGCTCGTGTTGCGATTACCCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGA
TCTTCATACAAAAATTGAAGAGTTTGCTCAAAGCATAGAGGCATATCCTTTGCATTCAAATGGGATGATCAAAGCTCCAAAAATTCTAGCCGACATTGTTGAATCAACCA
TTGGAGCTGTTTTTGCCGATAGCAACTCCATCGACACTGTTTGGACGATATTTAAAGAGCTATTGGAGCCATTGATTACTCTGAACACTATTAAAAGACATCCAATGACA
GAATTGACTGAAATTTGTCAAAAAAGAAGTCTCAAGTTGGAATTCGTGGATCTATGGGAAGAAACAAAAGAAATTCAAGTTTTTATAGACAAAAAACTTGTGGGAAAAGG
AAGCTATAGGAAAAAACTTATAGCTCAAAATAGAGCTGCAAAAGATGCTTTGAACAACTTAGATAGAGTTCTTGGAGAAATTAATCAACCTTGTCAACCTATGTAA
Protein sequenceShow/hide protein sequence
MYHNPQIFTMEEEEHGVDSFGGAGQAVNGEVRQNPAEMRTESSSSPPPSLEGIEAILNYEFRDKRLLEEAFTDASCSPENCSSFERLEYVGDSVLNFLMTREQYFSNPNL
SPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHTKIEEFAQSIEAYPLHSNGMIKAPKILADIVESTIGAVFADSNSIDTVWTIFKELLEPLITLNTIKRHPMT
ELTEICQKRSLKLEFVDLWEETKEIQVFIDKKLVGKGSYRKKLIAQNRAAKDALNNLDRVLGEINQPCQPM