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Spg008048 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008048
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S acidic ribosomal protein P3-2
Genome locationscaffold4:7217343..7220304
RNA-Seq ExpressionSpg008048
SyntenySpg008048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]2.7e-0470.83Show/hide
Query:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
        GGGGFIGGGA          AAAEAP EKK E+KEESDDEDL LSLFD
Subjt:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
TrEMBL top hitse value%identityAlignment
A0A1S3BRK9 60S acidic ribosomal protein P3-21.3e-0470.83Show/hide
Query:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
        GGGGFIGGGA          AAAEAP EKK E+KEESDDEDL LSLFD
Subjt:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
A0A5D3BNN6 60S acidic ribosomal protein P3-21.3e-0470.83Show/hide
Query:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
        GGGGFIGGGA          AAAEAP EKK E+KEESDDEDL LSLFD
Subjt:  GGGGFIGGGA----------AAAEAPVEKKGEMKEESDDEDLDLSLFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGAGAGAAGCTATTTCTCCCGACACCAAGAAAACGACGTCGGGAGAAACACAATGGAAATACTTTCTCTCGACGCCCTAAGACGGCGTCGGCAAAAACGCTACC
TTTCTCGACGTCGAGAGAAATGCTCTCTCTTCTCCAAACCAAGTCGCCGTTTCCTGTCCCACCGTCTCCTCGCCTACCGTCGTCTCGTGCGCCGTCGTCCGTCGCCGCCT
CACTCGCCGTCGACTGTGCTTTTGAAGTTGAAATCGGTGCTCCTTTGTTGGACTTGAGGGCCTTGGGCATTTTGGCTAAAAGATTTTGGTTGCGGTTTCTCGTCATCCTC
GATGAATCATTTGTTACGGTAGCAAATTTGGAATCATTGAGTGATCAGCTTGTTGCTATCCTGCAGTTATGTGTGATTTGGGAATTTCAAGGCTTTGATCATGACAAGGG
TAGCAATAATTTCGTTGGTGGTGGCGGATTCATTGGCGGTGGAGCAGCTGCTGCAGAAGCCCCAGTTGAGAAGAAGGGAGAGATGAAGGAAGAGAGTGATGACGAAGACC
TTGACCTTTCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCGAGAGAAGCTATTTCTCCCGACACCAAGAAAACGACGTCGGGAGAAACACAATGGAAATACTTTCTCTCGACGCCCTAAGACGGCGTCGGCAAAAACGCTACC
TTTCTCGACGTCGAGAGAAATGCTCTCTCTTCTCCAAACCAAGTCGCCGTTTCCTGTCCCACCGTCTCCTCGCCTACCGTCGTCTCGTGCGCCGTCGTCCGTCGCCGCCT
CACTCGCCGTCGACTGTGCTTTTGAAGTTGAAATCGGTGCTCCTTTGTTGGACTTGAGGGCCTTGGGCATTTTGGCTAAAAGATTTTGGTTGCGGTTTCTCGTCATCCTC
GATGAATCATTTGTTACGGTAGCAAATTTGGAATCATTGAGTGATCAGCTTGTTGCTATCCTGCAGTTATGTGTGATTTGGGAATTTCAAGGCTTTGATCATGACAAGGG
TAGCAATAATTTCGTTGGTGGTGGCGGATTCATTGGCGGTGGAGCAGCTGCTGCAGAAGCCCCAGTTGAGAAGAAGGGAGAGATGAAGGAAGAGAGTGATGACGAAGACC
TTGACCTTTCACTTTTTGATTAG
Protein sequenceShow/hide protein sequence
MRREKLFLPTPRKRRREKHNGNTFSRRPKTASAKTLPFSTSREMLSLLQTKSPFPVPPSPRLPSSRAPSSVAASLAVDCAFEVEIGAPLLDLRALGILAKRFWLRFLVIL
DESFVTVANLESLSDQLVAILQLCVIWEFQGFDHDKGSNNFVGGGGFIGGGAAAAEAPVEKKGEMKEESDDEDLDLSLFD