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Spg008077 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008077
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationscaffold4:6951222..6953210
RNA-Seq ExpressionSpg008077
SyntenySpg008077
Gene Ontology termsGO:0016311 - dephosphorylation (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2872.73Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ
        V+D ATV DLR++I++  +LPSDRL+FVPD +RGR IS ADDG SLVDFG+ DGS IY+FFCPLDD+  DDLDARQLFF CPDLLLFQ
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]2.0e-2571.43Show/hide
Query:  VEDDATVSDLRSQITAH---HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF-ACPDLLLF
        VEDDATVSDLR+QI AH   HNLPS RLIF+PD N  R IS+ DDGISLVDFG+ DGSHIYIFF PL DD GDD++AR+ FF +  DLLLF
Subjt:  VEDDATVSDLRSQITAH---HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF-ACPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]9.2e-2364.29Show/hide
Query:  VEDDATVSDLRSQITAHHN--LPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLD-----DDSGDDLD----ARQLFFACPDLLLF
        V+DDATVSDL+++I+AHHN  LPSDRLIF+ DDN GRPIS+ DDG SLVD GV DGSHIYIFF PLD     D  GDD D    +R  FF C ++LLF
Subjt:  VEDDATVSDLRSQITAHHN--LPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLD-----DDSGDDLD----ARQLFFACPDLLLF

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]1.6e-2771.59Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ
        V+D ATV DLR++I++  +LPSDRL+FVPD +RGR IS ADDG SLVDFG+ DGS IY+FFCPLD++  DDLDARQLFF CPDLLLFQ
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]1.0e-2976.14Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ
        V+D ATV DLR++I++  +LPSDRL+FVPD +RGR IS ADDGISLVDFG+ DGS IYIFFCPLDDD GDD+DARQLFF CPDLLLFQ
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein9.6e-2671.43Show/hide
Query:  VEDDATVSDLRSQITAH---HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF-ACPDLLLF
        VEDDATVSDLR+QI AH   HNLPS RLIF+PD N  R IS+ DDGISLVDFG+ DGSHIYIFF PL DD GDD++AR+ FF +  DLLLF
Subjt:  VEDDATVSDLRSQITAH---HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF-ACPDLLLF

A0A5D3BP45 Phosphoglucan phosphatase LSF12.0e-1565.71Show/hide
Query:  RSQITAH-HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF
        R+QI AH  NLPS  LIF+ D +  R ISE DD ISLVDFG+ DGS+IYIFFCPLD+D GDD++AR+ FF
Subjt:  RSQITAH-HNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFF

A0A6J1C3E5 uncharacterized protein LOC1110078944.4e-2364.29Show/hide
Query:  VEDDATVSDLRSQITAHHN--LPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLD-----DDSGDDLD----ARQLFFACPDLLLF
        V+DDATVSDL+++I+AHHN  LPSDRLIF+ DDN GRPIS+ DDG SLVD GV DGSHIYIFF PLD     D  GDD D    +R  FF C ++LLF
Subjt:  VEDDATVSDLRSQITAHHN--LPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLD-----DDSGDDLD----ARQLFFACPDLLLF

A0A6J1ERN4 uncharacterized protein LOC1114370937.8e-2871.59Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ
        V+D ATV DLR++I++  +LPSDRL+FVPD +RGR IS ADDG SLVDFG+ DGS IY+FFCPLD++  DDLDARQLFF CPDLLLFQ
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ

A0A6J1JPI4 uncharacterized protein LOC1114865614.9e-3076.14Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ
        V+D ATV DLR++I++  +LPSDRL+FVPD +RGR IS ADDGISLVDFG+ DGS IYIFFCPLDDD GDD+DARQLFF CPDLLLFQ
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein4.4e-0743.55Show/hide
Query:  VEDDATVSDLRSQITAHHNLPSDRLIFV-PDDNRGRPISEADDGISLVDFGVGDGSHIYIFF
        V +DATV  ++ +I     LP  RLI V  D+   R + E +D + L D GVG+ SHIY+FF
Subjt:  VEDDATVSDLRSQITAHHNLPSDRLIFV-PDDNRGRPISEADDGISLVDFGVGDGSHIYIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGATTCAGCCACTCTTCCCTGTCATTCAAACATTCTAAGTTAGTTGAAGACGATGCCACTGTTTCTGATCTTAGAAGCCAGATCACTGCCCACCACAACCTCCC
TTCTGACCGTCTGATCTTCGTTCCTGACGACAATCGTGGCCGTCCGATCTCGGAGGCAGATGATGGAATCTCGCTCGTTGATTTTGGCGTCGGAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCGCTTGATGACGACAGTGGCGATGATCTTGATGCTCGCCAACTCTTCTTTGCCTGTCCTGATCTTCTTCTCTTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGATTCAGCCACTCTTCCCTGTCATTCAAACATTCTAAGTTAGTTGAAGACGATGCCACTGTTTCTGATCTTAGAAGCCAGATCACTGCCCACCACAACCTCCC
TTCTGACCGTCTGATCTTCGTTCCTGACGACAATCGTGGCCGTCCGATCTCGGAGGCAGATGATGGAATCTCGCTCGTTGATTTTGGCGTCGGAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCGCTTGATGACGACAGTGGCGATGATCTTGATGCTCGCCAACTCTTCTTTGCCTGTCCTGATCTTCTTCTCTTCCAGTAG
Protein sequenceShow/hide protein sequence
MSGFSHSSLSFKHSKLVEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ